RNA–Protein interactions for RNA: ENST00000469691.5

TNFRSF25-210, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 3

Gene TNFRSF25, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-210ENST00000469691 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
TNFRSF25-210ENST00000469691 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
TNFRSF25-210ENST00000469691 ABCC9O60706 1549 aa30.68■■■□□ 2.5
TNFRSF25-210ENST00000469691 RB1CC1Q8TDY2 1594 aa29.49■■■□□ 2.31
TNFRSF25-210ENST00000469691 NACADO15069 1562 aa29.39■■■□□ 2.29
TNFRSF25-210ENST00000469691 DCAF8L2P0C7V8 631 aa29.28■■■□□ 2.28
TNFRSF25-210ENST00000469691 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
TNFRSF25-210ENST00000469691 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
TNFRSF25-210ENST00000469691 UNC13AQ9UPW8 1703 aa29■■■□□ 2.23
TNFRSF25-210ENST00000469691 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
TNFRSF25-210ENST00000469691 SCRIBQ14160 1630 aa28.61■■■□□ 2.17
TNFRSF25-210ENST00000469691 BICRAQ9NZM4 1560 aa28.58■■■□□ 2.17
TNFRSF25-210ENST00000469691 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
TNFRSF25-210ENST00000469691 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
TNFRSF25-210ENST00000469691 DNAJC5BQ9UF47 199 aa28.07■■■□□ 2.08
TNFRSF25-210ENST00000469691 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
TNFRSF25-210ENST00000469691 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
TNFRSF25-210ENST00000469691 CECR2Q9BXF3 1484 aa27.54■■■□□ 2
TNFRSF25-210ENST00000469691 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
TNFRSF25-210ENST00000469691 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
TNFRSF25-210ENST00000469691 SMARCA2P51531 1590 aa27.09■■□□□ 1.93
TNFRSF25-210ENST00000469691 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
TNFRSF25-210ENST00000469691 MROH2BQ7Z745 1585 aa27.02■■□□□ 1.92
TNFRSF25-210ENST00000469691 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
TNFRSF25-210ENST00000469691 HMGXB3Q12766 1538 aa27■■□□□ 1.91
TNFRSF25-210ENST00000469691 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
TNFRSF25-210ENST00000469691 BAZ1BQ9UIG0 1483 aaKnown RBP26.91■■□□□ 1.9
TNFRSF25-210ENST00000469691 WIZO95785 1651 aa26.82■■□□□ 1.88
TNFRSF25-210ENST00000469691 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
TNFRSF25-210ENST00000469691 NESP48681 1621 aa26.51■■□□□ 1.83
TNFRSF25-210ENST00000469691 TOP2AP11388 1531 aaKnown RBP26.48■■□□□ 1.83
TNFRSF25-210ENST00000469691 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
TNFRSF25-210ENST00000469691 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
TNFRSF25-210ENST00000469691 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
TNFRSF25-210ENST00000469691 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
TNFRSF25-210ENST00000469691 THOC2Q8NI27 1593 aaKnown RBP26.22■■□□□ 1.79
TNFRSF25-210ENST00000469691 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
TNFRSF25-210ENST00000469691 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
TNFRSF25-210ENST00000469691 CUX2O14529 1486 aa26.18■■□□□ 1.78
TNFRSF25-210ENST00000469691 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
TNFRSF25-210ENST00000469691 CFTRP13569 1480 aa26.08■■□□□ 1.77
TNFRSF25-210ENST00000469691 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
TNFRSF25-210ENST00000469691 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
TNFRSF25-210ENST00000469691 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
TNFRSF25-210ENST00000469691 WDR62O43379 1518 aa25.93■■□□□ 1.74
TNFRSF25-210ENST00000469691 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
TNFRSF25-210ENST00000469691 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
TNFRSF25-210ENST00000469691 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
TNFRSF25-210ENST00000469691 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
TNFRSF25-210ENST00000469691 ABCC8Q09428 1581 aa25.54■■□□□ 1.68
TNFRSF25-210ENST00000469691 IFT140Q96RY7 1462 aa25.43■■□□□ 1.66
TNFRSF25-210ENST00000469691 CUX1P39880 1505 aa25.38■■□□□ 1.65
TNFRSF25-210ENST00000469691 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
TNFRSF25-210ENST00000469691 EIF4G3O43432 1585 aaKnown RBP25.36■■□□□ 1.65
TNFRSF25-210ENST00000469691 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF25-210ENST00000469691 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
TNFRSF25-210ENST00000469691 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF25-210ENST00000469691 FGD5Q6ZNL6 1462 aa25.31■■□□□ 1.64
TNFRSF25-210ENST00000469691 RAD54L2Q9Y4B4 1467 aa25.25■■□□□ 1.63
TNFRSF25-210ENST00000469691 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
TNFRSF25-210ENST00000469691 BIVM-ERCC5R4GMW8 1640 aa25.21■■□□□ 1.63
TNFRSF25-210ENST00000469691 SOGA1O94964 1423 aa25.2■■□□□ 1.62
TNFRSF25-210ENST00000469691 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
TNFRSF25-210ENST00000469691 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
TNFRSF25-210ENST00000469691 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.62
TNFRSF25-210ENST00000469691 CHD1O14646 1710 aa25.14■■□□□ 1.61
TNFRSF25-210ENST00000469691 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
TNFRSF25-210ENST00000469691 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
TNFRSF25-210ENST00000469691 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
TNFRSF25-210ENST00000469691 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
TNFRSF25-210ENST00000469691 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
TNFRSF25-210ENST00000469691 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
TNFRSF25-210ENST00000469691 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
TNFRSF25-210ENST00000469691 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
TNFRSF25-210ENST00000469691 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
TNFRSF25-210ENST00000469691 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF25-210ENST00000469691 FBLN2P98095 1184 aa24.88■■□□□ 1.57
TNFRSF25-210ENST00000469691 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
TNFRSF25-210ENST00000469691 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
TNFRSF25-210ENST00000469691 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
TNFRSF25-210ENST00000469691 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
TNFRSF25-210ENST00000469691 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
TNFRSF25-210ENST00000469691 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
TNFRSF25-210ENST00000469691 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
TNFRSF25-210ENST00000469691 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
TNFRSF25-210ENST00000469691 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
TNFRSF25-210ENST00000469691 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
TNFRSF25-210ENST00000469691 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
TNFRSF25-210ENST00000469691 TRIM41Q8WV44 630 aa24.62■■□□□ 1.53
TNFRSF25-210ENST00000469691 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
TNFRSF25-210ENST00000469691 CUL7Q14999 1698 aa24.6■■□□□ 1.53
TNFRSF25-210ENST00000469691 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
TNFRSF25-210ENST00000469691 NUP160Q12769 1436 aa24.51■■□□□ 1.51
TNFRSF25-210ENST00000469691 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
TNFRSF25-210ENST00000469691 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.51
TNFRSF25-210ENST00000469691 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
TNFRSF25-210ENST00000469691 IGF1RP08069 1367 aa24.42■■□□□ 1.5
TNFRSF25-210ENST00000469691 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
TNFRSF25-210ENST00000469691 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
TNFRSF25-210ENST00000469691 CARMIL1Q5VZK9 1371 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms