RNA–Protein interactions for RNA: ENST00000469689.1

PNKD-205, Transcript of PNKD, MBL domain containing, humanhuman

TSL 2

Gene PNKD, Length 1,372 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-205ENST00000469689 NISCHQ9Y2I1 1504 aa42.24■■■■■ 4.35
PNKD-205ENST00000469689 CCDC180Q9P1Z9 1646 aa37.56■■■■□ 3.6
PNKD-205ENST00000469689 ABCC9O60706 1549 aa37.15■■■■□ 3.54
PNKD-205ENST00000469689 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
PNKD-205ENST00000469689 RB1CC1Q8TDY2 1594 aa35.53■■■■□ 3.28
PNKD-205ENST00000469689 NACADO15069 1562 aa35.42■■■■□ 3.26
PNKD-205ENST00000469689 ZCCHC6Q5VYS8 1495 aaKnown RBP35.12■■■■□ 3.21
PNKD-205ENST00000469689 MYO15BQ96JP2 1530 aa35.07■■■■□ 3.21
PNKD-205ENST00000469689 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
PNKD-205ENST00000469689 PABPN1Q86U42 306 aaKnown RBP eCLIP34.74■■■■□ 3.15
PNKD-205ENST00000469689 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
PNKD-205ENST00000469689 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
PNKD-205ENST00000469689 BICRAQ9NZM4 1560 aa34.48■■■■□ 3.11
PNKD-205ENST00000469689 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
PNKD-205ENST00000469689 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
PNKD-205ENST00000469689 EIF4G1Q04637 1599 aaKnown RBP33.59■■■□□ 2.97
PNKD-205ENST00000469689 CC2D2AQ9P2K1 1620 aa33.53■■■□□ 2.96
PNKD-205ENST00000469689 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
PNKD-205ENST00000469689 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
PNKD-205ENST00000469689 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
PNKD-205ENST00000469689 ATAD2BQ9ULI0 1458 aa32.72■■■□□ 2.83
PNKD-205ENST00000469689 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
PNKD-205ENST00000469689 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
PNKD-205ENST00000469689 MROH2BQ7Z745 1585 aa32.59■■■□□ 2.81
PNKD-205ENST00000469689 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
PNKD-205ENST00000469689 BAZ1BQ9UIG0 1483 aaKnown RBP32.45■■■□□ 2.78
PNKD-205ENST00000469689 PEG3Q9GZU2 1588 aa32.44■■■□□ 2.78
PNKD-205ENST00000469689 WIZO95785 1651 aa32.21■■■□□ 2.75
PNKD-205ENST00000469689 RSF1Q96T23 1441 aaPredicted RBP32.13■■■□□ 2.73
PNKD-205ENST00000469689 NESP48681 1621 aa32.08■■■□□ 2.73
PNKD-205ENST00000469689 ERCC6Q03468 1493 aa32.02■■■□□ 2.72
PNKD-205ENST00000469689 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
PNKD-205ENST00000469689 TOP2AP11388 1531 aaKnown RBP31.83■■■□□ 2.69
PNKD-205ENST00000469689 CUX2O14529 1486 aa31.79■■■□□ 2.68
PNKD-205ENST00000469689 CADPSQ9ULU8 1353 aa31.78■■■□□ 2.68
PNKD-205ENST00000469689 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
PNKD-205ENST00000469689 KIF21AQ7Z4S6 1674 aa31.61■■■□□ 2.65
PNKD-205ENST00000469689 DNAJC5Q9H3Z4 198 aa31.56■■■□□ 2.64
PNKD-205ENST00000469689 THOC2Q8NI27 1593 aaKnown RBP31.55■■■□□ 2.64
PNKD-205ENST00000469689 CFTRP13569 1480 aa31.51■■■□□ 2.63
PNKD-205ENST00000469689 CCDC88BA6NC98 1476 aa31.5■■■□□ 2.63
PNKD-205ENST00000469689 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
PNKD-205ENST00000469689 MRC2Q9UBG0 1479 aa31.39■■■□□ 2.62
PNKD-205ENST00000469689 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
PNKD-205ENST00000469689 SUPT5HO00267 1087 aaKnown RBP31.29■■■□□ 2.6
PNKD-205ENST00000469689 WDR62O43379 1518 aa31.26■■■□□ 2.59
PNKD-205ENST00000469689 PRDM2Q13029 1718 aa31.16■■■□□ 2.58
PNKD-205ENST00000469689 URB2Q14146 1524 aaKnown RBP31.13■■■□□ 2.57
PNKD-205ENST00000469689 TOPBP1Q92547 1522 aa30.89■■■□□ 2.53
PNKD-205ENST00000469689 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
PNKD-205ENST00000469689 DNMBPQ6XZF7 1577 aa30.8■■■□□ 2.52
PNKD-205ENST00000469689 IFT140Q96RY7 1462 aa30.74■■■□□ 2.51
PNKD-205ENST00000469689 ZNF608Q9ULD9 1512 aaPredicted RBP30.67■■■□□ 2.5
PNKD-205ENST00000469689 POLA1P09884 1462 aaPredicted RBP30.61■■■□□ 2.49
PNKD-205ENST00000469689 CUX1P39880 1505 aa30.58■■■□□ 2.49
PNKD-205ENST00000469689 RAD54L2Q9Y4B4 1467 aa30.54■■■□□ 2.48
PNKD-205ENST00000469689 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
PNKD-205ENST00000469689 FGD5Q6ZNL6 1462 aa30.52■■■□□ 2.48
PNKD-205ENST00000469689 SOGA1O94964 1423 aa30.51■■■□□ 2.47
PNKD-205ENST00000469689 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
PNKD-205ENST00000469689 AQRO60306 1485 aaKnown RBP eCLIP30.48■■■□□ 2.47
PNKD-205ENST00000469689 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
PNKD-205ENST00000469689 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
PNKD-205ENST00000469689 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
PNKD-205ENST00000469689 WRNQ14191 1432 aaPredicted RBP eCLIP30.31■■■□□ 2.44
PNKD-205ENST00000469689 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
PNKD-205ENST00000469689 FBLN2P98095 1184 aa30.23■■■□□ 2.43
PNKD-205ENST00000469689 TOP2BQ02880 1626 aa30.21■■■□□ 2.43
PNKD-205ENST00000469689 WDR97A6NE52 1622 aa30.2■■■□□ 2.43
PNKD-205ENST00000469689 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
PNKD-205ENST00000469689 ABCA10Q8WWZ4 1543 aa30.17■■■□□ 2.42
PNKD-205ENST00000469689 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
PNKD-205ENST00000469689 GRIN2BQ13224 1484 aa30.15■■■□□ 2.42
PNKD-205ENST00000469689 CHD1O14646 1710 aa30.14■■■□□ 2.41
PNKD-205ENST00000469689 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
PNKD-205ENST00000469689 MAGI1Q96QZ7 1491 aaPredicted RBP30.07■■■□□ 2.4
PNKD-205ENST00000469689 ABCA5Q8WWZ7 1642 aa30.06■■■□□ 2.4
PNKD-205ENST00000469689 CHMP7Q8WUX9 453 aaPredicted RBP30.05■■■□□ 2.4
PNKD-205ENST00000469689 PBRM1Q86U86 1689 aa30.03■■■□□ 2.4
PNKD-205ENST00000469689 RIMBP3CA6NJZ7 1639 aa29.98■■■□□ 2.39
PNKD-205ENST00000469689 RIMBP3BA6NNM3 1639 aa29.98■■■□□ 2.39
PNKD-205ENST00000469689 RIMBP3Q9UFD9 1639 aa29.98■■■□□ 2.39
PNKD-205ENST00000469689 SYNJ2O15056 1496 aa29.96■■■□□ 2.39
PNKD-205ENST00000469689 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
PNKD-205ENST00000469689 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
PNKD-205ENST00000469689 ADAMTS12P58397 1594 aa29.8■■■□□ 2.36
PNKD-205ENST00000469689 CLASP1Q7Z460 1538 aa29.79■■■□□ 2.36
PNKD-205ENST00000469689 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
PNKD-205ENST00000469689 FHAD1B1AJZ9 1412 aa29.77■■■□□ 2.36
PNKD-205ENST00000469689 GRIN2AQ12879 1464 aa29.76■■■□□ 2.35
PNKD-205ENST00000469689 KIF27Q86VH2 1401 aa29.69■■■□□ 2.34
PNKD-205ENST00000469689 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
PNKD-205ENST00000469689 CEP170Q5SW79 1584 aa29.63■■■□□ 2.33
PNKD-205ENST00000469689 NUP160Q12769 1436 aa29.62■■■□□ 2.33
PNKD-205ENST00000469689 IGF1RP08069 1367 aa29.61■■■□□ 2.33
PNKD-205ENST00000469689 CUL7Q14999 1698 aa29.45■■■□□ 2.31
PNKD-205ENST00000469689 ERCC6L2Q5T890 1561 aa29.44■■■□□ 2.3
PNKD-205ENST00000469689 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
PNKD-205ENST00000469689 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
PNKD-205ENST00000469689 SHROOM2Q13796 1616 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms