RNA–Protein interactions for RNA: ENST00000469647.5

KLHDC9-204, Transcript of kelch domain containing 9, humanhuman

TSL 3

Gene KLHDC9, Length 921 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9-204ENST00000469647 NISCHQ9Y2I1 1504 aa51.54■■■■■ 5.84
KLHDC9-204ENST00000469647 CCDC180Q9P1Z9 1646 aa45.97■■■■■ 4.95
KLHDC9-204ENST00000469647 ABCC9O60706 1549 aa45.75■■■■■ 4.91
KLHDC9-204ENST00000469647 DCAF8L2P0C7V8 631 aa43.64■■■■■ 4.58
KLHDC9-204ENST00000469647 RB1CC1Q8TDY2 1594 aa43.59■■■■■ 4.57
KLHDC9-204ENST00000469647 NACADO15069 1562 aa43.36■■■■■ 4.53
KLHDC9-204ENST00000469647 ZCCHC6Q5VYS8 1495 aaKnown RBP42.81■■■■■ 4.44
KLHDC9-204ENST00000469647 MYO15BQ96JP2 1530 aa42.77■■■■■ 4.44
KLHDC9-204ENST00000469647 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
KLHDC9-204ENST00000469647 UNC13AQ9UPW8 1703 aa42.66■■■■■ 4.42
KLHDC9-204ENST00000469647 DNAJC5BQ9UF47 199 aa42.46■■■■■ 4.39
KLHDC9-204ENST00000469647 DCAF1Q9Y4B6 1507 aa42.46■■■■■ 4.39
KLHDC9-204ENST00000469647 BICRAQ9NZM4 1560 aa42.31■■■■■ 4.36
KLHDC9-204ENST00000469647 SCRIBQ14160 1630 aa42.15■■■■■ 4.34
KLHDC9-204ENST00000469647 SHROOM4Q9ULL8 1493 aa41.6■■■■■ 4.25
KLHDC9-204ENST00000469647 CC2D2AQ9P2K1 1620 aa41.26■■■■■ 4.19
KLHDC9-204ENST00000469647 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
KLHDC9-204ENST00000469647 CECR2Q9BXF3 1484 aa41.08■■■■■ 4.17
KLHDC9-204ENST00000469647 SMARCA4P51532 1647 aa40.13■■■■■ 4.02
KLHDC9-204ENST00000469647 ATAD2BQ9ULI0 1458 aa40.04■■■■■ 4
KLHDC9-204ENST00000469647 NCAPD3P42695 1498 aa40.01■■■■■ 4
KLHDC9-204ENST00000469647 BAZ1AQ9NRL2 1556 aaPredicted RBP39.97■■■■□ 3.99
KLHDC9-204ENST00000469647 SMARCA2P51531 1590 aa39.92■■■■□ 3.98
KLHDC9-204ENST00000469647 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
KLHDC9-204ENST00000469647 HMGXB3Q12766 1538 aa39.76■■■■□ 3.96
KLHDC9-204ENST00000469647 BAZ1BQ9UIG0 1483 aaKnown RBP39.73■■■■□ 3.95
KLHDC9-204ENST00000469647 PEG3Q9GZU2 1588 aa39.6■■■■□ 3.93
KLHDC9-204ENST00000469647 ERCC6Q03468 1493 aa39.45■■■■□ 3.91
KLHDC9-204ENST00000469647 NESP48681 1621 aa39.43■■■■□ 3.9
KLHDC9-204ENST00000469647 WIZO95785 1651 aa39.39■■■■□ 3.9
KLHDC9-204ENST00000469647 RSF1Q96T23 1441 aaPredicted RBP39.12■■■■□ 3.85
KLHDC9-204ENST00000469647 LAMC3Q9Y6N6 1575 aa39.07■■■■□ 3.84
KLHDC9-204ENST00000469647 CUX2O14529 1486 aa39.04■■■■□ 3.84
KLHDC9-204ENST00000469647 KIF21AQ7Z4S6 1674 aa38.9■■■■□ 3.82
KLHDC9-204ENST00000469647 CADPSQ9ULU8 1353 aa38.89■■■■□ 3.82
KLHDC9-204ENST00000469647 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
KLHDC9-204ENST00000469647 TOP2AP11388 1531 aaKnown RBP38.83■■■■□ 3.81
KLHDC9-204ENST00000469647 THOC2Q8NI27 1593 aaKnown RBP38.81■■■■□ 3.8
KLHDC9-204ENST00000469647 DNAJC5Q9H3Z4 198 aa38.53■■■■□ 3.76
KLHDC9-204ENST00000469647 MRC2Q9UBG0 1479 aa38.52■■■■□ 3.76
KLHDC9-204ENST00000469647 CFTRP13569 1480 aa38.51■■■■□ 3.76
KLHDC9-204ENST00000469647 FANCD2Q9BXW9 1451 aa38.5■■■■□ 3.75
KLHDC9-204ENST00000469647 CEP164Q9UPV0 1460 aa38.49■■■■□ 3.75
KLHDC9-204ENST00000469647 CCDC88BA6NC98 1476 aa38.44■■■■□ 3.74
KLHDC9-204ENST00000469647 WDR62O43379 1518 aa38.37■■■■□ 3.73
KLHDC9-204ENST00000469647 PRDM2Q13029 1718 aa38.17■■■■□ 3.7
KLHDC9-204ENST00000469647 URB2Q14146 1524 aaKnown RBP38.16■■■■□ 3.7
KLHDC9-204ENST00000469647 SUPT5HO00267 1087 aaKnown RBP38.01■■■■□ 3.68
KLHDC9-204ENST00000469647 TOPBP1Q92547 1522 aa37.82■■■■□ 3.64
KLHDC9-204ENST00000469647 DNMBPQ6XZF7 1577 aa37.69■■■■□ 3.62
KLHDC9-204ENST00000469647 ABCC8Q09428 1581 aa37.66■■■■□ 3.62
KLHDC9-204ENST00000469647 IFT140Q96RY7 1462 aa37.65■■■■□ 3.62
KLHDC9-204ENST00000469647 ZNF608Q9ULD9 1512 aaPredicted RBP37.65■■■■□ 3.62
KLHDC9-204ENST00000469647 POLA1P09884 1462 aaPredicted RBP37.45■■■■□ 3.59
KLHDC9-204ENST00000469647 OSCARQ8IYS5 282 aa37.44■■■■□ 3.58
KLHDC9-204ENST00000469647 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
KLHDC9-204ENST00000469647 RAD54L2Q9Y4B4 1467 aa37.4■■■■□ 3.58
KLHDC9-204ENST00000469647 TARBP1Q13395 1621 aaKnown RBP37.4■■■■□ 3.58
KLHDC9-204ENST00000469647 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.58
KLHDC9-204ENST00000469647 CUX1P39880 1505 aa37.36■■■■□ 3.57
KLHDC9-204ENST00000469647 FGD5Q6ZNL6 1462 aa37.33■■■■□ 3.57
KLHDC9-204ENST00000469647 SOGA1O94964 1423 aa37.33■■■■□ 3.57
KLHDC9-204ENST00000469647 TRIM41Q8WV44 630 aa37.3■■■■□ 3.56
KLHDC9-204ENST00000469647 TDRD9Q8NDG6 1382 aaKnown RBP37.26■■■■□ 3.55
KLHDC9-204ENST00000469647 FBLN2P98095 1184 aa37.18■■■■□ 3.54
KLHDC9-204ENST00000469647 CHD1O14646 1710 aa37.09■■■■□ 3.53
KLHDC9-204ENST00000469647 SNAPC4Q5SXM2 1469 aa37.01■■■■□ 3.51
KLHDC9-204ENST00000469647 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
KLHDC9-204ENST00000469647 WRNQ14191 1432 aaPredicted RBP eCLIP36.92■■■■□ 3.5
KLHDC9-204ENST00000469647 RIMBP3CA6NJZ7 1639 aa36.92■■■■□ 3.5
KLHDC9-204ENST00000469647 RIMBP3BA6NNM3 1639 aa36.92■■■■□ 3.5
KLHDC9-204ENST00000469647 RIMBP3Q9UFD9 1639 aa36.92■■■■□ 3.5
KLHDC9-204ENST00000469647 GRIN2BQ13224 1484 aa36.9■■■■□ 3.5
KLHDC9-204ENST00000469647 SYNJ1O43426 1573 aa36.89■■■■□ 3.5
KLHDC9-204ENST00000469647 CHMP7Q8WUX9 453 aaPredicted RBP36.87■■■■□ 3.49
KLHDC9-204ENST00000469647 GAPVD1Q14C86 1478 aa36.87■■■■□ 3.49
KLHDC9-204ENST00000469647 TOP2BQ02880 1626 aa36.84■■■■□ 3.49
KLHDC9-204ENST00000469647 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
KLHDC9-204ENST00000469647 PBRM1Q86U86 1689 aa36.83■■■■□ 3.49
KLHDC9-204ENST00000469647 BIVM-ERCC5R4GMW8 1640 aa36.83■■■■□ 3.49
KLHDC9-204ENST00000469647 ARHGEF11O15085 1522 aa36.83■■■■□ 3.49
KLHDC9-204ENST00000469647 MAGI1Q96QZ7 1491 aaPredicted RBP36.81■■■■□ 3.48
KLHDC9-204ENST00000469647 ABCA5Q8WWZ7 1642 aa36.77■■■■□ 3.48
KLHDC9-204ENST00000469647 SYNJ2O15056 1496 aa36.71■■■■□ 3.47
KLHDC9-204ENST00000469647 CYB5RLQ6IPT4 315 aa36.65■■■■□ 3.46
KLHDC9-204ENST00000469647 CLASP1Q7Z460 1538 aa36.58■■■■□ 3.45
KLHDC9-204ENST00000469647 ARAP1Q96P48 1450 aa36.5■■■■□ 3.43
KLHDC9-204ENST00000469647 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
KLHDC9-204ENST00000469647 GRIN2AQ12879 1464 aa36.43■■■■□ 3.42
KLHDC9-204ENST00000469647 FHAD1B1AJZ9 1412 aa36.38■■■■□ 3.41
KLHDC9-204ENST00000469647 ERICH3Q5RHP9 1530 aa36.38■■■■□ 3.41
KLHDC9-204ENST00000469647 CEP170Q5SW79 1584 aa36.32■■■■□ 3.4
KLHDC9-204ENST00000469647 NUP160Q12769 1436 aa36.24■■■■□ 3.39
KLHDC9-204ENST00000469647 ERCC6L2Q5T890 1561 aa36.18■■■■□ 3.38
KLHDC9-204ENST00000469647 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
KLHDC9-204ENST00000469647 TRHP20396 242 aaPredicted RBP36.15■■■■□ 3.38
KLHDC9-204ENST00000469647 IGF1RP08069 1367 aa36.09■■■■□ 3.37
KLHDC9-204ENST00000469647 SHROOM2Q13796 1616 aa36.01■■■■□ 3.35
KLHDC9-204ENST00000469647 CUL7Q14999 1698 aa35.97■■■■□ 3.35
KLHDC9-204ENST00000469647 JPH4Q96JJ6 628 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms