RNA–Protein interactions for RNA: ENST00000469637.1

CASP9-208, Transcript of caspase 9, humanhuman

TSL 3

Gene CASP9, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-208ENST00000469637 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
CASP9-208ENST00000469637 CCDC180Q9P1Z9 1646 aa30.38■■■□□ 2.45
CASP9-208ENST00000469637 ABCC9O60706 1549 aa29.39■■■□□ 2.3
CASP9-208ENST00000469637 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
CASP9-208ENST00000469637 NACADO15069 1562 aa28.55■■■□□ 2.16
CASP9-208ENST00000469637 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
CASP9-208ENST00000469637 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
CASP9-208ENST00000469637 DCAF1Q9Y4B6 1507 aa28.41■■■□□ 2.14
CASP9-208ENST00000469637 DCAF8L2P0C7V8 631 aa28.17■■■□□ 2.1
CASP9-208ENST00000469637 UNC13AQ9UPW8 1703 aa27.71■■■□□ 2.03
CASP9-208ENST00000469637 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
CASP9-208ENST00000469637 BICRAQ9NZM4 1560 aa27.57■■■□□ 2
CASP9-208ENST00000469637 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
CASP9-208ENST00000469637 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
CASP9-208ENST00000469637 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
CASP9-208ENST00000469637 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
CASP9-208ENST00000469637 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
CASP9-208ENST00000469637 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
CASP9-208ENST00000469637 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
CASP9-208ENST00000469637 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
CASP9-208ENST00000469637 NCAPD3P42695 1498 aa26.34■■□□□ 1.81
CASP9-208ENST00000469637 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
CASP9-208ENST00000469637 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
CASP9-208ENST00000469637 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
CASP9-208ENST00000469637 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
CASP9-208ENST00000469637 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.78
CASP9-208ENST00000469637 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
CASP9-208ENST00000469637 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
CASP9-208ENST00000469637 WIZO95785 1651 aa25.87■■□□□ 1.73
CASP9-208ENST00000469637 TOP2AP11388 1531 aaKnown RBP25.74■■□□□ 1.71
CASP9-208ENST00000469637 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
CASP9-208ENST00000469637 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
CASP9-208ENST00000469637 NESP48681 1621 aa25.45■■□□□ 1.66
CASP9-208ENST00000469637 PDS5BQ9NTI5 1447 aa25.44■■□□□ 1.66
CASP9-208ENST00000469637 CFTRP13569 1480 aa25.42■■□□□ 1.66
CASP9-208ENST00000469637 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
CASP9-208ENST00000469637 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
CASP9-208ENST00000469637 CUX2O14529 1486 aa25.28■■□□□ 1.64
CASP9-208ENST00000469637 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
CASP9-208ENST00000469637 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
CASP9-208ENST00000469637 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
CASP9-208ENST00000469637 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
CASP9-208ENST00000469637 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
CASP9-208ENST00000469637 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
CASP9-208ENST00000469637 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
CASP9-208ENST00000469637 WDR62O43379 1518 aa25.07■■□□□ 1.6
CASP9-208ENST00000469637 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
CASP9-208ENST00000469637 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
CASP9-208ENST00000469637 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
CASP9-208ENST00000469637 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
CASP9-208ENST00000469637 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
CASP9-208ENST00000469637 CUX1P39880 1505 aa24.6■■□□□ 1.53
CASP9-208ENST00000469637 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
CASP9-208ENST00000469637 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
CASP9-208ENST00000469637 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
CASP9-208ENST00000469637 WRNQ14191 1432 aaPredicted RBP eCLIP24.51■■□□□ 1.51
CASP9-208ENST00000469637 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
CASP9-208ENST00000469637 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
CASP9-208ENST00000469637 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
CASP9-208ENST00000469637 SOGA1O94964 1423 aa24.46■■□□□ 1.51
CASP9-208ENST00000469637 ZNF608Q9ULD9 1512 aaPredicted RBP24.4■■□□□ 1.5
CASP9-208ENST00000469637 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
CASP9-208ENST00000469637 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
CASP9-208ENST00000469637 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
CASP9-208ENST00000469637 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
CASP9-208ENST00000469637 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
CASP9-208ENST00000469637 AQRO60306 1485 aaKnown RBP eCLIP24.28■■□□□ 1.48
CASP9-208ENST00000469637 TDRD9Q8NDG6 1382 aaKnown RBP24.24■■□□□ 1.47
CASP9-208ENST00000469637 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
CASP9-208ENST00000469637 ABCA5Q8WWZ7 1642 aa24.22■■□□□ 1.47
CASP9-208ENST00000469637 GAPVD1Q14C86 1478 aa24.21■■□□□ 1.47
CASP9-208ENST00000469637 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
CASP9-208ENST00000469637 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
CASP9-208ENST00000469637 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
CASP9-208ENST00000469637 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
CASP9-208ENST00000469637 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
CASP9-208ENST00000469637 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
CASP9-208ENST00000469637 KIF27Q86VH2 1401 aa24.02■■□□□ 1.44
CASP9-208ENST00000469637 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
CASP9-208ENST00000469637 CHD1O14646 1710 aa23.98■■□□□ 1.43
CASP9-208ENST00000469637 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
CASP9-208ENST00000469637 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
CASP9-208ENST00000469637 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
CASP9-208ENST00000469637 FBLN2P98095 1184 aa23.89■■□□□ 1.41
CASP9-208ENST00000469637 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
CASP9-208ENST00000469637 IGF1RP08069 1367 aa23.89■■□□□ 1.41
CASP9-208ENST00000469637 CUL7Q14999 1698 aa23.87■■□□□ 1.41
CASP9-208ENST00000469637 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
CASP9-208ENST00000469637 NUP160Q12769 1436 aa23.84■■□□□ 1.41
CASP9-208ENST00000469637 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
CASP9-208ENST00000469637 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
CASP9-208ENST00000469637 EEA1Q15075 1411 aa23.72■■□□□ 1.39
CASP9-208ENST00000469637 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
CASP9-208ENST00000469637 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
CASP9-208ENST00000469637 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
CASP9-208ENST00000469637 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
CASP9-208ENST00000469637 RAPGEF2Q9Y4G8 1499 aa23.63■■□□□ 1.37
CASP9-208ENST00000469637 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
CASP9-208ENST00000469637 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
CASP9-208ENST00000469637 KIAA0586Q9BVV6 1533 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms