RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
SNU13-207ENST00000469522 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.77
SNU13-207ENST00000469522 ABCC9O60706 1549 aa25.83■■□□□ 1.73
SNU13-207ENST00000469522 RB1CC1Q8TDY2 1594 aa24.68■■□□□ 1.54
SNU13-207ENST00000469522 NACADO15069 1562 aa24.59■■□□□ 1.53
SNU13-207ENST00000469522 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.49
SNU13-207ENST00000469522 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
SNU13-207ENST00000469522 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
SNU13-207ENST00000469522 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
SNU13-207ENST00000469522 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
SNU13-207ENST00000469522 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
SNU13-207ENST00000469522 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
SNU13-207ENST00000469522 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
SNU13-207ENST00000469522 SCRIBQ14160 1630 aa23.84■■□□□ 1.41
SNU13-207ENST00000469522 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
SNU13-207ENST00000469522 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
SNU13-207ENST00000469522 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
SNU13-207ENST00000469522 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
SNU13-207ENST00000469522 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
SNU13-207ENST00000469522 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
SNU13-207ENST00000469522 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
SNU13-207ENST00000469522 BAZ1AQ9NRL2 1556 aaPredicted RBP22.64■■□□□ 1.22
SNU13-207ENST00000469522 SMARCA2P51531 1590 aa22.6■■□□□ 1.21
SNU13-207ENST00000469522 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
SNU13-207ENST00000469522 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
SNU13-207ENST00000469522 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
SNU13-207ENST00000469522 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
SNU13-207ENST00000469522 NESP48681 1621 aa22.33■■□□□ 1.17
SNU13-207ENST00000469522 WIZO95785 1651 aa22.33■■□□□ 1.16
SNU13-207ENST00000469522 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
SNU13-207ENST00000469522 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
SNU13-207ENST00000469522 LAMC3Q9Y6N6 1575 aa22.15■■□□□ 1.14
SNU13-207ENST00000469522 CUX2O14529 1486 aa22.1■■□□□ 1.13
SNU13-207ENST00000469522 THOC2Q8NI27 1593 aaKnown RBP22.07■■□□□ 1.12
SNU13-207ENST00000469522 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
SNU13-207ENST00000469522 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
SNU13-207ENST00000469522 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
SNU13-207ENST00000469522 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
SNU13-207ENST00000469522 CFTRP13569 1480 aa21.86■■□□□ 1.09
SNU13-207ENST00000469522 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
SNU13-207ENST00000469522 WDR62O43379 1518 aa21.78■■□□□ 1.08
SNU13-207ENST00000469522 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
SNU13-207ENST00000469522 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
SNU13-207ENST00000469522 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.07
SNU13-207ENST00000469522 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
SNU13-207ENST00000469522 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
SNU13-207ENST00000469522 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
SNU13-207ENST00000469522 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
SNU13-207ENST00000469522 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
SNU13-207ENST00000469522 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1
SNU13-207ENST00000469522 IFT140Q96RY7 1462 aa21.3■■□□□ 1
SNU13-207ENST00000469522 ABCC8Q09428 1581 aa21.29■■□□□ 1
SNU13-207ENST00000469522 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
SNU13-207ENST00000469522 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
SNU13-207ENST00000469522 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
SNU13-207ENST00000469522 EIF4G3O43432 1585 aaKnown RBP21.22■□□□□ 0.99
SNU13-207ENST00000469522 CUX1P39880 1505 aa21.19■□□□□ 0.98
SNU13-207ENST00000469522 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
SNU13-207ENST00000469522 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.971e-20■■■■■ 27.6
SNU13-207ENST00000469522 FGD5Q6ZNL6 1462 aa21.13■□□□□ 0.97
SNU13-207ENST00000469522 OSCARQ8IYS5 282 aa21.07■□□□□ 0.96
SNU13-207ENST00000469522 SOGA1O94964 1423 aa21.06■□□□□ 0.96
SNU13-207ENST00000469522 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
SNU13-207ENST00000469522 CHD1O14646 1710 aa21.02■□□□□ 0.96
SNU13-207ENST00000469522 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
SNU13-207ENST00000469522 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
SNU13-207ENST00000469522 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
SNU13-207ENST00000469522 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
SNU13-207ENST00000469522 RIMBP3CA6NJZ7 1639 aa20.91■□□□□ 0.94
SNU13-207ENST00000469522 RIMBP3BA6NNM3 1639 aa20.91■□□□□ 0.94
SNU13-207ENST00000469522 RIMBP3Q9UFD9 1639 aa20.91■□□□□ 0.94
SNU13-207ENST00000469522 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
SNU13-207ENST00000469522 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
SNU13-207ENST00000469522 ABCA10Q8WWZ4 1543 aa20.89■□□□□ 0.94
SNU13-207ENST00000469522 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
SNU13-207ENST00000469522 PBRM1Q86U86 1689 aa20.88■□□□□ 0.93
SNU13-207ENST00000469522 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
SNU13-207ENST00000469522 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
SNU13-207ENST00000469522 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
SNU13-207ENST00000469522 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
SNU13-207ENST00000469522 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
SNU13-207ENST00000469522 FBLN2P98095 1184 aa20.8■□□□□ 0.92
SNU13-207ENST00000469522 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
SNU13-207ENST00000469522 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
SNU13-207ENST00000469522 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
SNU13-207ENST00000469522 ADAMTS12P58397 1594 aa20.7■□□□□ 0.9
SNU13-207ENST00000469522 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SNU13-207ENST00000469522 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
SNU13-207ENST00000469522 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
SNU13-207ENST00000469522 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
SNU13-207ENST00000469522 CYB5RLQ6IPT4 315 aa20.59■□□□□ 0.89
SNU13-207ENST00000469522 FHAD1B1AJZ9 1412 aa20.57■□□□□ 0.88
SNU13-207ENST00000469522 NUP160Q12769 1436 aa20.57■□□□□ 0.88
SNU13-207ENST00000469522 ERCC6L2Q5T890 1561 aa20.52■□□□□ 0.88
SNU13-207ENST00000469522 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
SNU13-207ENST00000469522 IGF1RP08069 1367 aa20.43■□□□□ 0.86
SNU13-207ENST00000469522 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
SNU13-207ENST00000469522 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
SNU13-207ENST00000469522 CUL7Q14999 1698 aa20.38■□□□□ 0.85
SNU13-207ENST00000469522 PRG4Q92954 1404 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms