RNA–Protein interactions for RNA: ENST00000469437.1

LRRC3B-206, Transcript of leucine rich repeat containing 3B, humanhuman

TSL 5

Gene LRRC3B, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-206ENST00000469437 NISCHQ9Y2I1 1504 aa29.73■■■□□ 2.35
LRRC3B-206ENST00000469437 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
LRRC3B-206ENST00000469437 ABCC9O60706 1549 aa26.37■■□□□ 1.81
LRRC3B-206ENST00000469437 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
LRRC3B-206ENST00000469437 NACADO15069 1562 aa25.12■■□□□ 1.61
LRRC3B-206ENST00000469437 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
LRRC3B-206ENST00000469437 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
LRRC3B-206ENST00000469437 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
LRRC3B-206ENST00000469437 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
LRRC3B-206ENST00000469437 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
LRRC3B-206ENST00000469437 PABPN1Q86U42 306 aaKnown RBP eCLIP24.56■■□□□ 1.52
LRRC3B-206ENST00000469437 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
LRRC3B-206ENST00000469437 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
LRRC3B-206ENST00000469437 SHROOM4Q9ULL8 1493 aa24.23■■□□□ 1.47
LRRC3B-206ENST00000469437 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
LRRC3B-206ENST00000469437 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
LRRC3B-206ENST00000469437 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
LRRC3B-206ENST00000469437 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
LRRC3B-206ENST00000469437 NCAPD3P42695 1498 aa23.19■■□□□ 1.3
LRRC3B-206ENST00000469437 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
LRRC3B-206ENST00000469437 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
LRRC3B-206ENST00000469437 SMARCA2P51531 1590 aa23.08■■□□□ 1.29
LRRC3B-206ENST00000469437 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
LRRC3B-206ENST00000469437 HMGXB3Q12766 1538 aa23.04■■□□□ 1.28
LRRC3B-206ENST00000469437 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
LRRC3B-206ENST00000469437 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
LRRC3B-206ENST00000469437 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.25
LRRC3B-206ENST00000469437 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
LRRC3B-206ENST00000469437 NESP48681 1621 aa22.71■■□□□ 1.23
LRRC3B-206ENST00000469437 CUX2O14529 1486 aa22.7■■□□□ 1.22
LRRC3B-206ENST00000469437 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
LRRC3B-206ENST00000469437 WIZO95785 1651 aa22.62■■□□□ 1.21
LRRC3B-206ENST00000469437 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
LRRC3B-206ENST00000469437 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
LRRC3B-206ENST00000469437 CADPSQ9ULU8 1353 aa22.48■■□□□ 1.19
LRRC3B-206ENST00000469437 THOC2Q8NI27 1593 aaKnown RBP22.47■■□□□ 1.19
LRRC3B-206ENST00000469437 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
LRRC3B-206ENST00000469437 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
LRRC3B-206ENST00000469437 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
LRRC3B-206ENST00000469437 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
LRRC3B-206ENST00000469437 CFTRP13569 1480 aa22.27■■□□□ 1.16
LRRC3B-206ENST00000469437 WDR62O43379 1518 aa22.22■■□□□ 1.15
LRRC3B-206ENST00000469437 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
LRRC3B-206ENST00000469437 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
LRRC3B-206ENST00000469437 CCDC88BA6NC98 1476 aa22.1■■□□□ 1.13
LRRC3B-206ENST00000469437 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
LRRC3B-206ENST00000469437 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
LRRC3B-206ENST00000469437 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
LRRC3B-206ENST00000469437 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
LRRC3B-206ENST00000469437 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
LRRC3B-206ENST00000469437 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
LRRC3B-206ENST00000469437 ZNF608Q9ULD9 1512 aaPredicted RBP21.69■■□□□ 1.06
LRRC3B-206ENST00000469437 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
LRRC3B-206ENST00000469437 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
LRRC3B-206ENST00000469437 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
LRRC3B-206ENST00000469437 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
LRRC3B-206ENST00000469437 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
LRRC3B-206ENST00000469437 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.04
LRRC3B-206ENST00000469437 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
LRRC3B-206ENST00000469437 SOGA1O94964 1423 aa21.5■■□□□ 1.03
LRRC3B-206ENST00000469437 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
LRRC3B-206ENST00000469437 CUX1P39880 1505 aa21.5■■□□□ 1.03
LRRC3B-206ENST00000469437 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
LRRC3B-206ENST00000469437 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
LRRC3B-206ENST00000469437 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
LRRC3B-206ENST00000469437 CHD1O14646 1710 aa21.38■■□□□ 1.01
LRRC3B-206ENST00000469437 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
LRRC3B-206ENST00000469437 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
LRRC3B-206ENST00000469437 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
LRRC3B-206ENST00000469437 ARHGEF11O15085 1522 aa21.32■■□□□ 1
LRRC3B-206ENST00000469437 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
LRRC3B-206ENST00000469437 FBLN2P98095 1184 aa21.31■■□□□ 1
LRRC3B-206ENST00000469437 GRIN2BQ13224 1484 aa21.31■■□□□ 1
LRRC3B-206ENST00000469437 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
LRRC3B-206ENST00000469437 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
LRRC3B-206ENST00000469437 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
LRRC3B-206ENST00000469437 WRNQ14191 1432 aaPredicted RBP eCLIP21.23■□□□□ 0.99
LRRC3B-206ENST00000469437 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
LRRC3B-206ENST00000469437 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
LRRC3B-206ENST00000469437 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
LRRC3B-206ENST00000469437 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
LRRC3B-206ENST00000469437 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
LRRC3B-206ENST00000469437 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
LRRC3B-206ENST00000469437 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
LRRC3B-206ENST00000469437 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
LRRC3B-206ENST00000469437 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
LRRC3B-206ENST00000469437 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
LRRC3B-206ENST00000469437 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
LRRC3B-206ENST00000469437 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
LRRC3B-206ENST00000469437 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
LRRC3B-206ENST00000469437 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
LRRC3B-206ENST00000469437 NUP160Q12769 1436 aa20.97■□□□□ 0.95
LRRC3B-206ENST00000469437 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
LRRC3B-206ENST00000469437 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
LRRC3B-206ENST00000469437 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
LRRC3B-206ENST00000469437 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
LRRC3B-206ENST00000469437 TRHP20396 242 aaPredicted RBP20.82■□□□□ 0.92
LRRC3B-206ENST00000469437 IGF1RP08069 1367 aa20.78■□□□□ 0.92
LRRC3B-206ENST00000469437 RUSC2Q8N2Y8 1516 aa20.74■□□□□ 0.91
LRRC3B-206ENST00000469437 CUL7Q14999 1698 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms