RNA–Protein interactions for RNA: ENST00000469414.1

CIT-204, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-204ENST00000469414 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
CIT-204ENST00000469414 CCDC180Q9P1Z9 1646 aa21.04■□□□□ 0.96
CIT-204ENST00000469414 ABCC9O60706 1549 aa21■□□□□ 0.95
CIT-204ENST00000469414 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
CIT-204ENST00000469414 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
CIT-204ENST00000469414 NACADO15069 1562 aa19.93■□□□□ 0.78
CIT-204ENST00000469414 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
CIT-204ENST00000469414 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
CIT-204ENST00000469414 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
CIT-204ENST00000469414 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
CIT-204ENST00000469414 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
CIT-204ENST00000469414 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
CIT-204ENST00000469414 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
CIT-204ENST00000469414 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
CIT-204ENST00000469414 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
CIT-204ENST00000469414 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
CIT-204ENST00000469414 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
CIT-204ENST00000469414 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
CIT-204ENST00000469414 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
CIT-204ENST00000469414 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
CIT-204ENST00000469414 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
CIT-204ENST00000469414 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
CIT-204ENST00000469414 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
CIT-204ENST00000469414 SMARCA2P51531 1590 aa18.35■□□□□ 0.53
CIT-204ENST00000469414 AEBP2Q6ZN18 517 aaPredicted RBP18.32■□□□□ 0.52
CIT-204ENST00000469414 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
CIT-204ENST00000469414 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
CIT-204ENST00000469414 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
CIT-204ENST00000469414 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
CIT-204ENST00000469414 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
CIT-204ENST00000469414 NESP48681 1621 aa18.07■□□□□ 0.48
CIT-204ENST00000469414 WIZO95785 1651 aa18.03■□□□□ 0.48
CIT-204ENST00000469414 RSF1Q96T23 1441 aaPredicted RBP18.01■□□□□ 0.47
CIT-204ENST00000469414 CUX2O14529 1486 aa17.95■□□□□ 0.46
CIT-204ENST00000469414 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
CIT-204ENST00000469414 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
CIT-204ENST00000469414 PDS5BQ9NTI5 1447 aa17.92■□□□□ 0.46
CIT-204ENST00000469414 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
CIT-204ENST00000469414 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
CIT-204ENST00000469414 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
CIT-204ENST00000469414 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
CIT-204ENST00000469414 CFTRP13569 1480 aa17.72■□□□□ 0.43
CIT-204ENST00000469414 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
CIT-204ENST00000469414 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
CIT-204ENST00000469414 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
CIT-204ENST00000469414 CCDC88BA6NC98 1476 aa17.68■□□□□ 0.42
CIT-204ENST00000469414 WDR62O43379 1518 aa17.59■□□□□ 0.41
CIT-204ENST00000469414 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
CIT-204ENST00000469414 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
CIT-204ENST00000469414 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
CIT-204ENST00000469414 ABCC8Q09428 1581 aa17.37■□□□□ 0.37
CIT-204ENST00000469414 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
CIT-204ENST00000469414 IFT140Q96RY7 1462 aa17.33■□□□□ 0.37
CIT-204ENST00000469414 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
CIT-204ENST00000469414 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
CIT-204ENST00000469414 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
CIT-204ENST00000469414 SOGA1O94964 1423 aa17.21■□□□□ 0.34
CIT-204ENST00000469414 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
CIT-204ENST00000469414 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.341e-7■■■■■ 32.3
CIT-204ENST00000469414 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
CIT-204ENST00000469414 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
CIT-204ENST00000469414 FBLN2P98095 1184 aa17.16■□□□□ 0.34
CIT-204ENST00000469414 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
CIT-204ENST00000469414 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
CIT-204ENST00000469414 CUX1P39880 1505 aa17.14■□□□□ 0.33
CIT-204ENST00000469414 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
CIT-204ENST00000469414 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
CIT-204ENST00000469414 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
CIT-204ENST00000469414 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
CIT-204ENST00000469414 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
CIT-204ENST00000469414 SNAPC4Q5SXM2 1469 aa16.99■□□□□ 0.31
CIT-204ENST00000469414 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
CIT-204ENST00000469414 WDR97A6NE52 1622 aa16.96■□□□□ 0.3
CIT-204ENST00000469414 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
CIT-204ENST00000469414 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
CIT-204ENST00000469414 CHD1O14646 1710 aa16.91■□□□□ 0.3
CIT-204ENST00000469414 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
CIT-204ENST00000469414 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
CIT-204ENST00000469414 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
CIT-204ENST00000469414 SYNJ1O43426 1573 aa16.89■□□□□ 0.3
CIT-204ENST00000469414 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
CIT-204ENST00000469414 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
CIT-204ENST00000469414 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
CIT-204ENST00000469414 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
CIT-204ENST00000469414 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
CIT-204ENST00000469414 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
CIT-204ENST00000469414 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
CIT-204ENST00000469414 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
CIT-204ENST00000469414 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
CIT-204ENST00000469414 GRIN2AQ12879 1464 aa16.74■□□□□ 0.27
CIT-204ENST00000469414 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
CIT-204ENST00000469414 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
CIT-204ENST00000469414 ADAMTS12P58397 1594 aa16.71■□□□□ 0.27
CIT-204ENST00000469414 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
CIT-204ENST00000469414 KIF27Q86VH2 1401 aa16.69■□□□□ 0.26
CIT-204ENST00000469414 NUP160Q12769 1436 aa16.66■□□□□ 0.26
CIT-204ENST00000469414 IGF1RP08069 1367 aa16.65■□□□□ 0.26
CIT-204ENST00000469414 CEP170Q5SW79 1584 aa16.63■□□□□ 0.25
CIT-204ENST00000469414 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
CIT-204ENST00000469414 PRG4Q92954 1404 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms