RNA–Protein interactions for RNA: ENST00000469380.1

CSF3R-209, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-209ENST00000469380 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
CSF3R-209ENST00000469380 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
CSF3R-209ENST00000469380 ZCCHC6Q5VYS8 1495 aaKnown RBP21.87■■□□□ 1.09
CSF3R-209ENST00000469380 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
CSF3R-209ENST00000469380 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
CSF3R-209ENST00000469380 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
CSF3R-209ENST00000469380 SHROOM4Q9ULL8 1493 aa21.18■□□□□ 0.98
CSF3R-209ENST00000469380 ABCC9O60706 1549 aa21.08■□□□□ 0.96
CSF3R-209ENST00000469380 NACADO15069 1562 aa21.01■□□□□ 0.95
CSF3R-209ENST00000469380 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
CSF3R-209ENST00000469380 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
CSF3R-209ENST00000469380 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
CSF3R-209ENST00000469380 RSF1Q96T23 1441 aaPredicted RBP20.24■□□□□ 0.83
CSF3R-209ENST00000469380 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
CSF3R-209ENST00000469380 CECR2Q9BXF3 1484 aa20.12■□□□□ 0.81
CSF3R-209ENST00000469380 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.81
CSF3R-209ENST00000469380 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
CSF3R-209ENST00000469380 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
CSF3R-209ENST00000469380 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.785e-7■■□□□ 13.9
CSF3R-209ENST00000469380 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
CSF3R-209ENST00000469380 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
CSF3R-209ENST00000469380 WIZO95785 1651 aa19.83■□□□□ 0.76
CSF3R-209ENST00000469380 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
CSF3R-209ENST00000469380 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
CSF3R-209ENST00000469380 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
CSF3R-209ENST00000469380 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
CSF3R-209ENST00000469380 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
CSF3R-209ENST00000469380 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
CSF3R-209ENST00000469380 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
CSF3R-209ENST00000469380 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
CSF3R-209ENST00000469380 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
CSF3R-209ENST00000469380 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
CSF3R-209ENST00000469380 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
CSF3R-209ENST00000469380 CC2D2AQ9P2K1 1620 aa19.1■□□□□ 0.65
CSF3R-209ENST00000469380 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
CSF3R-209ENST00000469380 WRNQ14191 1432 aaPredicted RBP eCLIP19.03■□□□□ 0.64
CSF3R-209ENST00000469380 LOC105371045A0A1W2PR82 267 aa19.02■□□□□ 0.64
CSF3R-209ENST00000469380 CFTRP13569 1480 aa19.01■□□□□ 0.63
CSF3R-209ENST00000469380 EEA1Q15075 1411 aa18.95■□□□□ 0.62
CSF3R-209ENST00000469380 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
CSF3R-209ENST00000469380 CADPSQ9ULU8 1353 aa18.91■□□□□ 0.62
CSF3R-209ENST00000469380 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
CSF3R-209ENST00000469380 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
CSF3R-209ENST00000469380 PRDM2Q13029 1718 aa18.82■□□□□ 0.6
CSF3R-209ENST00000469380 SOGA1O94964 1423 aa18.82■□□□□ 0.6
CSF3R-209ENST00000469380 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
CSF3R-209ENST00000469380 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
CSF3R-209ENST00000469380 CUX1P39880 1505 aa18.72■□□□□ 0.59
CSF3R-209ENST00000469380 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
CSF3R-209ENST00000469380 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
CSF3R-209ENST00000469380 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
CSF3R-209ENST00000469380 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
CSF3R-209ENST00000469380 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
CSF3R-209ENST00000469380 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
CSF3R-209ENST00000469380 KIF21BO75037 1637 aa18.6■□□□□ 0.57
CSF3R-209ENST00000469380 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
CSF3R-209ENST00000469380 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
CSF3R-209ENST00000469380 NESP48681 1621 aa18.56■□□□□ 0.56
CSF3R-209ENST00000469380 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
CSF3R-209ENST00000469380 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
CSF3R-209ENST00000469380 UBTFP17480 764 aaKnown RBP18.5■□□□□ 0.55
CSF3R-209ENST00000469380 FGD5Q6ZNL6 1462 aa18.49■□□□□ 0.55
CSF3R-209ENST00000469380 PRXQ9BXM0 1461 aa18.49■□□□□ 0.55
CSF3R-209ENST00000469380 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
CSF3R-209ENST00000469380 ERICH3Q5RHP9 1530 aa18.48■□□□□ 0.55
CSF3R-209ENST00000469380 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
CSF3R-209ENST00000469380 RAPGEF2Q9Y4G8 1499 aa18.43■□□□□ 0.54
CSF3R-209ENST00000469380 CUX2O14529 1486 aa18.42■□□□□ 0.54
CSF3R-209ENST00000469380 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
CSF3R-209ENST00000469380 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
CSF3R-209ENST00000469380 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
CSF3R-209ENST00000469380 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
CSF3R-209ENST00000469380 IGF1RP08069 1367 aa18.39■□□□□ 0.53
CSF3R-209ENST00000469380 PCGF6Q9BYE7 350 aa18.35■□□□□ 0.53
CSF3R-209ENST00000469380 CLIP1P30622 1438 aa18.32■□□□□ 0.52
CSF3R-209ENST00000469380 KIF21AQ7Z4S6 1674 aa18.3■□□□□ 0.52
CSF3R-209ENST00000469380 RAD54L2Q9Y4B4 1467 aa18.29■□□□□ 0.52
CSF3R-209ENST00000469380 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
CSF3R-209ENST00000469380 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
CSF3R-209ENST00000469380 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
CSF3R-209ENST00000469380 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
CSF3R-209ENST00000469380 CUL7Q14999 1698 aa18.18■□□□□ 0.5
CSF3R-209ENST00000469380 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
CSF3R-209ENST00000469380 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
CSF3R-209ENST00000469380 WDR62O43379 1518 aa18.16■□□□□ 0.5
CSF3R-209ENST00000469380 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
CSF3R-209ENST00000469380 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
CSF3R-209ENST00000469380 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
CSF3R-209ENST00000469380 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
CSF3R-209ENST00000469380 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
CSF3R-209ENST00000469380 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
CSF3R-209ENST00000469380 HRCP23327 699 aa18.05■□□□□ 0.48
CSF3R-209ENST00000469380 APLP2Q06481 763 aa18.03■□□□□ 0.48
CSF3R-209ENST00000469380 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
CSF3R-209ENST00000469380 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
CSF3R-209ENST00000469380 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
CSF3R-209ENST00000469380 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
CSF3R-209ENST00000469380 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
CSF3R-209ENST00000469380 AQRO60306 1485 aaKnown RBP eCLIP17.97■□□□□ 0.47
CSF3R-209ENST00000469380 EFCAB5A4FU69 1503 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms