RNA–Protein interactions for RNA: ENST00000469366.1

MACF1-212, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-212ENST00000469366 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
MACF1-212ENST00000469366 CCDC180Q9P1Z9 1646 aa25.82■■□□□ 1.72
MACF1-212ENST00000469366 ABCC9O60706 1549 aa25.47■■□□□ 1.67
MACF1-212ENST00000469366 RB1CC1Q8TDY2 1594 aa24.38■■□□□ 1.49
MACF1-212ENST00000469366 NACADO15069 1562 aa24.32■■□□□ 1.48
MACF1-212ENST00000469366 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
MACF1-212ENST00000469366 MYO15BQ96JP2 1530 aa24.13■■□□□ 1.45
MACF1-212ENST00000469366 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
MACF1-212ENST00000469366 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
MACF1-212ENST00000469366 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
MACF1-212ENST00000469366 PABPN1Q86U42 306 aaKnown RBP eCLIP23.79■■□□□ 1.4
MACF1-212ENST00000469366 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
MACF1-212ENST00000469366 DNAJC5BQ9UF47 199 aa23.63■■□□□ 1.37
MACF1-212ENST00000469366 SCRIBQ14160 1630 aa23.56■■□□□ 1.36
MACF1-212ENST00000469366 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
MACF1-212ENST00000469366 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
MACF1-212ENST00000469366 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
MACF1-212ENST00000469366 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.25
MACF1-212ENST00000469366 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
MACF1-212ENST00000469366 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
MACF1-212ENST00000469366 ATAD2BQ9ULI0 1458 aa22.46■■□□□ 1.19
MACF1-212ENST00000469366 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
MACF1-212ENST00000469366 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
MACF1-212ENST00000469366 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
MACF1-212ENST00000469366 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
MACF1-212ENST00000469366 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
MACF1-212ENST00000469366 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
MACF1-212ENST00000469366 WIZO95785 1651 aa22.11■■□□□ 1.13
MACF1-212ENST00000469366 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
MACF1-212ENST00000469366 NESP48681 1621 aa22.02■■□□□ 1.11
MACF1-212ENST00000469366 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
MACF1-212ENST00000469366 LAMC3Q9Y6N6 1575 aa21.88■■□□□ 1.09
MACF1-212ENST00000469366 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.09
MACF1-212ENST00000469366 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
MACF1-212ENST00000469366 CUX2O14529 1486 aa21.77■■□□□ 1.07
MACF1-212ENST00000469366 KIF21AQ7Z4S6 1674 aa21.73■■□□□ 1.07
MACF1-212ENST00000469366 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
MACF1-212ENST00000469366 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
MACF1-212ENST00000469366 CFTRP13569 1480 aa21.64■■□□□ 1.05
MACF1-212ENST00000469366 CCDC88BA6NC98 1476 aa21.61■■□□□ 1.05
MACF1-212ENST00000469366 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
MACF1-212ENST00000469366 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
MACF1-212ENST00000469366 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
MACF1-212ENST00000469366 WDR62O43379 1518 aa21.47■■□□□ 1.03
MACF1-212ENST00000469366 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
MACF1-212ENST00000469366 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
MACF1-212ENST00000469366 DNAJC5Q9H3Z4 198 aa21.36■■□□□ 1.01
MACF1-212ENST00000469366 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
MACF1-212ENST00000469366 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
MACF1-212ENST00000469366 ABCC8Q09428 1581 aa21.14■□□□□ 0.97
MACF1-212ENST00000469366 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
MACF1-212ENST00000469366 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
MACF1-212ENST00000469366 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
MACF1-212ENST00000469366 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
MACF1-212ENST00000469366 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
MACF1-212ENST00000469366 CUX1P39880 1505 aa20.98■□□□□ 0.95
MACF1-212ENST00000469366 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
MACF1-212ENST00000469366 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
MACF1-212ENST00000469366 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
MACF1-212ENST00000469366 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.94
MACF1-212ENST00000469366 SOGA1O94964 1423 aa20.9■□□□□ 0.94
MACF1-212ENST00000469366 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
MACF1-212ENST00000469366 TDRD9Q8NDG6 1382 aaKnown RBP20.83■□□□□ 0.92
MACF1-212ENST00000469366 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
MACF1-212ENST00000469366 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
MACF1-212ENST00000469366 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
MACF1-212ENST00000469366 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
MACF1-212ENST00000469366 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
MACF1-212ENST00000469366 CHD1O14646 1710 aa20.7■□□□□ 0.9
MACF1-212ENST00000469366 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
MACF1-212ENST00000469366 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
MACF1-212ENST00000469366 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
MACF1-212ENST00000469366 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
MACF1-212ENST00000469366 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.9
MACF1-212ENST00000469366 FBLN2P98095 1184 aa20.64■□□□□ 0.89
MACF1-212ENST00000469366 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
MACF1-212ENST00000469366 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
MACF1-212ENST00000469366 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
MACF1-212ENST00000469366 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
MACF1-212ENST00000469366 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
MACF1-212ENST00000469366 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
MACF1-212ENST00000469366 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
MACF1-212ENST00000469366 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
MACF1-212ENST00000469366 ARHGEF11O15085 1522 aa20.52■□□□□ 0.87
MACF1-212ENST00000469366 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
MACF1-212ENST00000469366 ADAMTS12P58397 1594 aa20.44■□□□□ 0.86
MACF1-212ENST00000469366 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
MACF1-212ENST00000469366 GRIN2AQ12879 1464 aa20.41■□□□□ 0.86
MACF1-212ENST00000469366 FHAD1B1AJZ9 1412 aa20.4■□□□□ 0.86
MACF1-212ENST00000469366 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
MACF1-212ENST00000469366 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
MACF1-212ENST00000469366 NUP160Q12769 1436 aa20.34■□□□□ 0.85
MACF1-212ENST00000469366 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
MACF1-212ENST00000469366 IGF1RP08069 1367 aa20.32■□□□□ 0.84
MACF1-212ENST00000469366 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
MACF1-212ENST00000469366 ERCC6L2Q5T890 1561 aa20.22■□□□□ 0.83
MACF1-212ENST00000469366 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
MACF1-212ENST00000469366 CUL7Q14999 1698 aa20.2■□□□□ 0.82
MACF1-212ENST00000469366 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
MACF1-212ENST00000469366 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms