RNA–Protein interactions for RNA: ENST00000469307.4

PGAP2-215, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3

Gene PGAP2, Length 798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-215ENST00000469307 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
PGAP2-215ENST00000469307 CCDC180Q9P1Z9 1646 aa27.63■■■□□ 2.01
PGAP2-215ENST00000469307 ABCC9O60706 1549 aa27.23■■□□□ 1.95
PGAP2-215ENST00000469307 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.78
PGAP2-215ENST00000469307 NACADO15069 1562 aa26.08■■□□□ 1.77
PGAP2-215ENST00000469307 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
PGAP2-215ENST00000469307 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
PGAP2-215ENST00000469307 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
PGAP2-215ENST00000469307 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
PGAP2-215ENST00000469307 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
PGAP2-215ENST00000469307 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
PGAP2-215ENST00000469307 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
PGAP2-215ENST00000469307 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
PGAP2-215ENST00000469307 SHROOM4Q9ULL8 1493 aa25.24■■□□□ 1.63
PGAP2-215ENST00000469307 SCRIBQ14160 1630 aa25.01■■□□□ 1.59
PGAP2-215ENST00000469307 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
PGAP2-215ENST00000469307 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
PGAP2-215ENST00000469307 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.52
PGAP2-215ENST00000469307 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
PGAP2-215ENST00000469307 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
PGAP2-215ENST00000469307 SMARCA4P51532 1647 aa24■■□□□ 1.43
PGAP2-215ENST00000469307 SMARCA2P51531 1590 aa23.95■■□□□ 1.43
PGAP2-215ENST00000469307 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
PGAP2-215ENST00000469307 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
PGAP2-215ENST00000469307 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
PGAP2-215ENST00000469307 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
PGAP2-215ENST00000469307 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
PGAP2-215ENST00000469307 CUX2O14529 1486 aa23.54■■□□□ 1.36
PGAP2-215ENST00000469307 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
PGAP2-215ENST00000469307 NESP48681 1621 aa23.48■■□□□ 1.35
PGAP2-215ENST00000469307 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
PGAP2-215ENST00000469307 WIZO95785 1651 aa23.4■■□□□ 1.34
PGAP2-215ENST00000469307 RSF1Q96T23 1441 aaPredicted RBP23.38■■□□□ 1.33
PGAP2-215ENST00000469307 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
PGAP2-215ENST00000469307 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
PGAP2-215ENST00000469307 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
PGAP2-215ENST00000469307 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
PGAP2-215ENST00000469307 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
PGAP2-215ENST00000469307 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
PGAP2-215ENST00000469307 CFTRP13569 1480 aa23.15■■□□□ 1.3
PGAP2-215ENST00000469307 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.29
PGAP2-215ENST00000469307 WDR62O43379 1518 aa23.05■■□□□ 1.28
PGAP2-215ENST00000469307 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
PGAP2-215ENST00000469307 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
PGAP2-215ENST00000469307 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
PGAP2-215ENST00000469307 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
PGAP2-215ENST00000469307 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
PGAP2-215ENST00000469307 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
PGAP2-215ENST00000469307 TOPBP1Q92547 1522 aa22.62■■□□□ 1.21
PGAP2-215ENST00000469307 IFT140Q96RY7 1462 aa22.59■■□□□ 1.21
PGAP2-215ENST00000469307 DNMBPQ6XZF7 1577 aa22.56■■□□□ 1.2
PGAP2-215ENST00000469307 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
PGAP2-215ENST00000469307 TARBP1Q13395 1621 aaKnown RBP22.42■■□□□ 1.18
PGAP2-215ENST00000469307 POLA1P09884 1462 aaPredicted RBP22.41■■□□□ 1.18
PGAP2-215ENST00000469307 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
PGAP2-215ENST00000469307 EIF4G3O43432 1585 aaKnown RBP22.35■■□□□ 1.17
PGAP2-215ENST00000469307 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
PGAP2-215ENST00000469307 CUX1P39880 1505 aa22.31■■□□□ 1.16
PGAP2-215ENST00000469307 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
PGAP2-215ENST00000469307 SOGA1O94964 1423 aa22.27■■□□□ 1.16
PGAP2-215ENST00000469307 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.16
PGAP2-215ENST00000469307 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
PGAP2-215ENST00000469307 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
PGAP2-215ENST00000469307 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
PGAP2-215ENST00000469307 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
PGAP2-215ENST00000469307 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
PGAP2-215ENST00000469307 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
PGAP2-215ENST00000469307 CHD1O14646 1710 aa22.08■■□□□ 1.12
PGAP2-215ENST00000469307 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
PGAP2-215ENST00000469307 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
PGAP2-215ENST00000469307 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
PGAP2-215ENST00000469307 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
PGAP2-215ENST00000469307 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
PGAP2-215ENST00000469307 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
PGAP2-215ENST00000469307 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
PGAP2-215ENST00000469307 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
PGAP2-215ENST00000469307 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.129e-6■■■■■ 50.1
PGAP2-215ENST00000469307 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
PGAP2-215ENST00000469307 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.11
PGAP2-215ENST00000469307 SYNJ2O15056 1496 aa22■■□□□ 1.11
PGAP2-215ENST00000469307 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
PGAP2-215ENST00000469307 SYNJ1O43426 1573 aa21.95■■□□□ 1.11
PGAP2-215ENST00000469307 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
PGAP2-215ENST00000469307 FBLN2P98095 1184 aa21.93■■□□□ 1.1
PGAP2-215ENST00000469307 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
PGAP2-215ENST00000469307 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
PGAP2-215ENST00000469307 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
PGAP2-215ENST00000469307 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
PGAP2-215ENST00000469307 GRIN2AQ12879 1464 aa21.8■■□□□ 1.08
PGAP2-215ENST00000469307 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
PGAP2-215ENST00000469307 NUP160Q12769 1436 aa21.79■■□□□ 1.08
PGAP2-215ENST00000469307 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
PGAP2-215ENST00000469307 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
PGAP2-215ENST00000469307 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
PGAP2-215ENST00000469307 IGF1RP08069 1367 aa21.59■■□□□ 1.05
PGAP2-215ENST00000469307 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
PGAP2-215ENST00000469307 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
PGAP2-215ENST00000469307 CUL7Q14999 1698 aa21.51■■□□□ 1.03
PGAP2-215ENST00000469307 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
PGAP2-215ENST00000469307 JPH4Q96JJ6 628 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms