RNA–Protein interactions for RNA: ENST00000469302.1

TUBGCP3-205, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 2

Gene TUBGCP3, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-205ENST00000469302 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.24
TUBGCP3-205ENST00000469302 ABCC9O60706 1549 aa21.19■□□□□ 0.98
TUBGCP3-205ENST00000469302 CCDC180Q9P1Z9 1646 aa20.82■□□□□ 0.92
TUBGCP3-205ENST00000469302 DNAJC5BQ9UF47 199 aa20.26■□□□□ 0.83
TUBGCP3-205ENST00000469302 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
TUBGCP3-205ENST00000469302 NACADO15069 1562 aa19.74■□□□□ 0.75
TUBGCP3-205ENST00000469302 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
TUBGCP3-205ENST00000469302 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
TUBGCP3-205ENST00000469302 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
TUBGCP3-205ENST00000469302 MYO15BQ96JP2 1530 aa19.3■□□□□ 0.68
TUBGCP3-205ENST00000469302 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
TUBGCP3-205ENST00000469302 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
TUBGCP3-205ENST00000469302 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
TUBGCP3-205ENST00000469302 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
TUBGCP3-205ENST00000469302 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.64
TUBGCP3-205ENST00000469302 EIF4G1Q04637 1599 aaKnown RBP19.01■□□□□ 0.63
TUBGCP3-205ENST00000469302 SCRIBQ14160 1630 aa18.83■□□□□ 0.61
TUBGCP3-205ENST00000469302 DCAF1Q9Y4B6 1507 aa18.83■□□□□ 0.6
TUBGCP3-205ENST00000469302 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
TUBGCP3-205ENST00000469302 CUX2O14529 1486 aa18.58■□□□□ 0.56
TUBGCP3-205ENST00000469302 ERCC6Q03468 1493 aa18.38■□□□□ 0.53
TUBGCP3-205ENST00000469302 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
TUBGCP3-205ENST00000469302 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.49
TUBGCP3-205ENST00000469302 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
TUBGCP3-205ENST00000469302 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
TUBGCP3-205ENST00000469302 NESP48681 1621 aa18.03■□□□□ 0.48
TUBGCP3-205ENST00000469302 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
TUBGCP3-205ENST00000469302 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
TUBGCP3-205ENST00000469302 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
TUBGCP3-205ENST00000469302 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
TUBGCP3-205ENST00000469302 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
TUBGCP3-205ENST00000469302 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
TUBGCP3-205ENST00000469302 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
TUBGCP3-205ENST00000469302 PDS5BQ9NTI5 1447 aa17.77■□□□□ 0.44
TUBGCP3-205ENST00000469302 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
TUBGCP3-205ENST00000469302 WDR62O43379 1518 aa17.68■□□□□ 0.42
TUBGCP3-205ENST00000469302 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
TUBGCP3-205ENST00000469302 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
TUBGCP3-205ENST00000469302 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
TUBGCP3-205ENST00000469302 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
TUBGCP3-205ENST00000469302 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
TUBGCP3-205ENST00000469302 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
TUBGCP3-205ENST00000469302 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
TUBGCP3-205ENST00000469302 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
TUBGCP3-205ENST00000469302 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
TUBGCP3-205ENST00000469302 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
TUBGCP3-205ENST00000469302 WIZO95785 1651 aa17.31■□□□□ 0.36
TUBGCP3-205ENST00000469302 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
TUBGCP3-205ENST00000469302 CFTRP13569 1480 aa17.27■□□□□ 0.36
TUBGCP3-205ENST00000469302 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
TUBGCP3-205ENST00000469302 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
TUBGCP3-205ENST00000469302 ZNF608Q9ULD9 1512 aaPredicted RBP17.14■□□□□ 0.33
TUBGCP3-205ENST00000469302 CHD1O14646 1710 aa17.13■□□□□ 0.33
TUBGCP3-205ENST00000469302 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
TUBGCP3-205ENST00000469302 TRHP20396 242 aaPredicted RBP17.11■□□□□ 0.33
TUBGCP3-205ENST00000469302 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
TUBGCP3-205ENST00000469302 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
TUBGCP3-205ENST00000469302 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
TUBGCP3-205ENST00000469302 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
TUBGCP3-205ENST00000469302 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
TUBGCP3-205ENST00000469302 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
TUBGCP3-205ENST00000469302 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
TUBGCP3-205ENST00000469302 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
TUBGCP3-205ENST00000469302 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
TUBGCP3-205ENST00000469302 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
TUBGCP3-205ENST00000469302 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
TUBGCP3-205ENST00000469302 FBLN2P98095 1184 aa16.85■□□□□ 0.29
TUBGCP3-205ENST00000469302 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
TUBGCP3-205ENST00000469302 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
TUBGCP3-205ENST00000469302 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
TUBGCP3-205ENST00000469302 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
TUBGCP3-205ENST00000469302 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
TUBGCP3-205ENST00000469302 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
TUBGCP3-205ENST00000469302 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
TUBGCP3-205ENST00000469302 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
TUBGCP3-205ENST00000469302 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
TUBGCP3-205ENST00000469302 SOGA1O94964 1423 aa16.66■□□□□ 0.26
TUBGCP3-205ENST00000469302 CHMP7Q8WUX9 453 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP3-205ENST00000469302 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
TUBGCP3-205ENST00000469302 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
TUBGCP3-205ENST00000469302 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
TUBGCP3-205ENST00000469302 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
TUBGCP3-205ENST00000469302 KIF13AQ9H1H9 1805 aa16.58■□□□□ 0.24
TUBGCP3-205ENST00000469302 CUX1P39880 1505 aa16.5■□□□□ 0.23
TUBGCP3-205ENST00000469302 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
TUBGCP3-205ENST00000469302 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
TUBGCP3-205ENST00000469302 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
TUBGCP3-205ENST00000469302 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
TUBGCP3-205ENST00000469302 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
TUBGCP3-205ENST00000469302 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
TUBGCP3-205ENST00000469302 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
TUBGCP3-205ENST00000469302 NUP160Q12769 1436 aa16.39■□□□□ 0.21
TUBGCP3-205ENST00000469302 ILDR1Q86SU0 546 aaPredicted RBP16.36■□□□□ 0.21
TUBGCP3-205ENST00000469302 KDM6BO15054 1643 aa16.34■□□□□ 0.21
TUBGCP3-205ENST00000469302 ABCC10Q5T3U5 1492 aa16.32■□□□□ 0.2
TUBGCP3-205ENST00000469302 DIP2BQ9P265 1576 aa16.32■□□□□ 0.2
TUBGCP3-205ENST00000469302 MAPKBP1O60336 1514 aa16.31■□□□□ 0.2
TUBGCP3-205ENST00000469302 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
TUBGCP3-205ENST00000469302 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
TUBGCP3-205ENST00000469302 TSPOAP1O95153 1857 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms