RNA–Protein interactions for RNA: ENST00000469241.2

PKD1-205, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 659 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-205ENST00000469241 NISCHQ9Y2I1 1504 aa51.43■■■■■ 5.82
PKD1-205ENST00000469241 CCDC180Q9P1Z9 1646 aa46.13■■■■■ 4.97
PKD1-205ENST00000469241 ABCC9O60706 1549 aa45.95■■■■■ 4.95
PKD1-205ENST00000469241 RB1CC1Q8TDY2 1594 aa43.84■■■■■ 4.61
PKD1-205ENST00000469241 NACADO15069 1562 aa43.55■■■■■ 4.56
PKD1-205ENST00000469241 DCAF8L2P0C7V8 631 aa43.42■■■■■ 4.54
PKD1-205ENST00000469241 MYO15BQ96JP2 1530 aa42.98■■■■■ 4.47
PKD1-205ENST00000469241 DNAJC5BQ9UF47 199 aa42.85■■■■■ 4.45
PKD1-205ENST00000469241 UNC13AQ9UPW8 1703 aa42.8■■■■■ 4.44
PKD1-205ENST00000469241 PABPN1Q86U42 306 aaKnown RBP eCLIP42.78■■■■■ 4.44
PKD1-205ENST00000469241 ZCCHC6Q5VYS8 1495 aaKnown RBP42.67■■■■■ 4.42
PKD1-205ENST00000469241 DCAF1Q9Y4B6 1507 aa42.49■■■■■ 4.39
PKD1-205ENST00000469241 BICRAQ9NZM4 1560 aa42.47■■■■■ 4.39
PKD1-205ENST00000469241 SCRIBQ14160 1630 aa42.05■■■■■ 4.32
PKD1-205ENST00000469241 SHROOM4Q9ULL8 1493 aa41.98■■■■■ 4.31
PKD1-205ENST00000469241 CC2D2AQ9P2K1 1620 aa41.51■■■■■ 4.23
PKD1-205ENST00000469241 EIF4G1Q04637 1599 aaKnown RBP41.46■■■■■ 4.23
PKD1-205ENST00000469241 CECR2Q9BXF3 1484 aa41.38■■■■■ 4.21
PKD1-205ENST00000469241 NCAPD3P42695 1498 aa40.17■■■■■ 4.02
PKD1-205ENST00000469241 SMARCA4P51532 1647 aa40.1■■■■■ 4.01
PKD1-205ENST00000469241 ATAD2BQ9ULI0 1458 aa40.08■■■■■ 4.01
PKD1-205ENST00000469241 SMARCA2P51531 1590 aa40.03■■■■■ 4
PKD1-205ENST00000469241 BAZ1AQ9NRL2 1556 aaPredicted RBP39.96■■■■□ 3.99
PKD1-205ENST00000469241 HMGXB3Q12766 1538 aa39.92■■■■□ 3.98
PKD1-205ENST00000469241 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
PKD1-205ENST00000469241 ERCC6Q03468 1493 aa39.72■■■■□ 3.95
PKD1-205ENST00000469241 PEG3Q9GZU2 1588 aa39.69■■■■□ 3.94
PKD1-205ENST00000469241 MROH2BQ7Z745 1585 aa39.62■■■■□ 3.93
PKD1-205ENST00000469241 CUX2O14529 1486 aa39.54■■■■□ 3.92
PKD1-205ENST00000469241 NESP48681 1621 aa39.49■■■■□ 3.91
PKD1-205ENST00000469241 LAMC3Q9Y6N6 1575 aa39.29■■■■□ 3.88
PKD1-205ENST00000469241 DNAJC5Q9H3Z4 198 aa39.28■■■■□ 3.88
PKD1-205ENST00000469241 WIZO95785 1651 aa39.18■■■■□ 3.86
PKD1-205ENST00000469241 THOC2Q8NI27 1593 aaKnown RBP39.08■■■■□ 3.85
PKD1-205ENST00000469241 PDS5BQ9NTI5 1447 aa39.06■■■■□ 3.84
PKD1-205ENST00000469241 KIF21AQ7Z4S6 1674 aa39.02■■■■□ 3.84
PKD1-205ENST00000469241 CADPSQ9ULU8 1353 aa38.97■■■■□ 3.83
PKD1-205ENST00000469241 RSF1Q96T23 1441 aaPredicted RBP38.86■■■■□ 3.81
PKD1-205ENST00000469241 TOP2AP11388 1531 aaKnown RBP38.72■■■■□ 3.79
PKD1-205ENST00000469241 MRC2Q9UBG0 1479 aa38.71■■■■□ 3.79
PKD1-205ENST00000469241 CEP164Q9UPV0 1460 aa38.6■■■■□ 3.77
PKD1-205ENST00000469241 WDR62O43379 1518 aa38.58■■■■□ 3.77
PKD1-205ENST00000469241 CFTRP13569 1480 aa38.55■■■■□ 3.76
PKD1-205ENST00000469241 FANCD2Q9BXW9 1451 aa38.55■■■■□ 3.76
PKD1-205ENST00000469241 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
PKD1-205ENST00000469241 CCDC88BA6NC98 1476 aa38.24■■■■□ 3.71
PKD1-205ENST00000469241 URB2Q14146 1524 aaKnown RBP38.19■■■■□ 3.7
PKD1-205ENST00000469241 TOPBP1Q92547 1522 aa37.83■■■■□ 3.65
PKD1-205ENST00000469241 IFT140Q96RY7 1462 aa37.82■■■■□ 3.64
PKD1-205ENST00000469241 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
PKD1-205ENST00000469241 OSCARQ8IYS5 282 aa37.76■■■■□ 3.64
PKD1-205ENST00000469241 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
PKD1-205ENST00000469241 TRIM41Q8WV44 630 aa37.71■■■■□ 3.63
PKD1-205ENST00000469241 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
PKD1-205ENST00000469241 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
PKD1-205ENST00000469241 TARBP1Q13395 1621 aaKnown RBP37.47■■■■□ 3.59
PKD1-205ENST00000469241 POLA1P09884 1462 aaPredicted RBP37.45■■■■□ 3.59
PKD1-205ENST00000469241 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.58
PKD1-205ENST00000469241 SUPT5HO00267 1087 aaKnown RBP37.34■■■■□ 3.57
PKD1-205ENST00000469241 RAD54L2Q9Y4B4 1467 aa37.31■■■■□ 3.56
PKD1-205ENST00000469241 SOGA1O94964 1423 aa37.3■■■■□ 3.56
PKD1-205ENST00000469241 FGD5Q6ZNL6 1462 aa37.26■■■■□ 3.55
PKD1-205ENST00000469241 RIMBP3CA6NJZ7 1639 aa37.25■■■■□ 3.55
PKD1-205ENST00000469241 RIMBP3BA6NNM3 1639 aa37.25■■■■□ 3.55
PKD1-205ENST00000469241 RIMBP3Q9UFD9 1639 aa37.25■■■■□ 3.55
PKD1-205ENST00000469241 CHD1O14646 1710 aa37.23■■■■□ 3.55
PKD1-205ENST00000469241 CUX1P39880 1505 aa37.22■■■■□ 3.55
PKD1-205ENST00000469241 TDRD9Q8NDG6 1382 aaKnown RBP37.19■■■■□ 3.54
PKD1-205ENST00000469241 FBLN2P98095 1184 aa37.18■■■■□ 3.54
PKD1-205ENST00000469241 ARHGEF11O15085 1522 aa37.15■■■■□ 3.54
PKD1-205ENST00000469241 WDR97A6NE52 1622 aa37.14■■■■□ 3.54
PKD1-205ENST00000469241 SNAPC4Q5SXM2 1469 aa37.04■■■■□ 3.52
PKD1-205ENST00000469241 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
PKD1-205ENST00000469241 MAGI1Q96QZ7 1491 aaPredicted RBP36.95■■■■□ 3.51
PKD1-205ENST00000469241 CHMP7Q8WUX9 453 aaPredicted RBP36.92■■■■□ 3.5
PKD1-205ENST00000469241 CYB5RLQ6IPT4 315 aa36.87■■■■□ 3.49
PKD1-205ENST00000469241 PBRM1Q86U86 1689 aa36.86■■■■□ 3.49
PKD1-205ENST00000469241 GAPVD1Q14C86 1478 aa36.85■■■■□ 3.49
PKD1-205ENST00000469241 ABCA10Q8WWZ4 1543 aa36.84■■■■□ 3.49
PKD1-205ENST00000469241 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
PKD1-205ENST00000469241 SYNJ2O15056 1496 aa36.82■■■■□ 3.49
PKD1-205ENST00000469241 ARAP1Q96P48 1450 aa36.77■■■■□ 3.48
PKD1-205ENST00000469241 CLASP1Q7Z460 1538 aa36.77■■■■□ 3.48
PKD1-205ENST00000469241 ABCA5Q8WWZ7 1642 aa36.77■■■■□ 3.48
PKD1-205ENST00000469241 WRNQ14191 1432 aaPredicted RBP eCLIP36.75■■■■□ 3.47
PKD1-205ENST00000469241 BIVM-ERCC5R4GMW8 1640 aa36.7■■■■□ 3.47
PKD1-205ENST00000469241 TOP2BQ02880 1626 aa36.7■■■■□ 3.47
PKD1-205ENST00000469241 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
PKD1-205ENST00000469241 GRIN2AQ12879 1464 aa36.49■■■■□ 3.43
PKD1-205ENST00000469241 TRHP20396 242 aaPredicted RBP36.46■■■■□ 3.43
PKD1-205ENST00000469241 FHAD1B1AJZ9 1412 aa36.4■■■■□ 3.42
PKD1-205ENST00000469241 ERICH3Q5RHP9 1530 aa36.39■■■■□ 3.42
PKD1-205ENST00000469241 CEP170Q5SW79 1584 aa36.34■■■■□ 3.41
PKD1-205ENST00000469241 NUP160Q12769 1436 aa36.33■■■■□ 3.41
PKD1-205ENST00000469241 ERCC6L2Q5T890 1561 aa36.19■■■■□ 3.38
PKD1-205ENST00000469241 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
PKD1-205ENST00000469241 KIF27Q86VH2 1401 aa36.02■■■■□ 3.36
PKD1-205ENST00000469241 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
PKD1-205ENST00000469241 RUSC2Q8N2Y8 1516 aa35.98■■■■□ 3.35
PKD1-205ENST00000469241 JPH4Q96JJ6 628 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms