RNA–Protein interactions for RNA: ENST00000469142.1

DMD-218, Transcript of dystrophin, humanhuman

TSL 4

Gene DMD, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-218ENST00000469142 NISCHQ9Y2I1 1504 aa21.1■□□□□ 0.97
DMD-218ENST00000469142 ABCC9O60706 1549 aa19.41■□□□□ 0.7
DMD-218ENST00000469142 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
DMD-218ENST00000469142 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
DMD-218ENST00000469142 DCAF8L2P0C7V8 631 aa18.24■□□□□ 0.51
DMD-218ENST00000469142 RB1CC1Q8TDY2 1594 aa18.2■□□□□ 0.5
DMD-218ENST00000469142 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
DMD-218ENST00000469142 NACADO15069 1562 aa18.01■□□□□ 0.47
DMD-218ENST00000469142 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
DMD-218ENST00000469142 UNC13AQ9UPW8 1703 aa17.66■□□□□ 0.42
DMD-218ENST00000469142 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
DMD-218ENST00000469142 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
DMD-218ENST00000469142 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
DMD-218ENST00000469142 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
DMD-218ENST00000469142 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
DMD-218ENST00000469142 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
DMD-218ENST00000469142 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
DMD-218ENST00000469142 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
DMD-218ENST00000469142 DNAJC5Q9H3Z4 198 aa17.21■□□□□ 0.35
DMD-218ENST00000469142 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
DMD-218ENST00000469142 CUX2O14529 1486 aa16.72■□□□□ 0.27
DMD-218ENST00000469142 NCAPD3P42695 1498 aa16.72■□□□□ 0.27
DMD-218ENST00000469142 ATAD2BQ9ULI0 1458 aa16.64■□□□□ 0.25
DMD-218ENST00000469142 NESP48681 1621 aa16.59■□□□□ 0.25
DMD-218ENST00000469142 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
DMD-218ENST00000469142 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
DMD-218ENST00000469142 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
DMD-218ENST00000469142 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
DMD-218ENST00000469142 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
DMD-218ENST00000469142 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
DMD-218ENST00000469142 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
DMD-218ENST00000469142 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
DMD-218ENST00000469142 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
DMD-218ENST00000469142 LAMC3Q9Y6N6 1575 aa16.27■□□□□ 0.2
DMD-218ENST00000469142 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
DMD-218ENST00000469142 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
DMD-218ENST00000469142 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
DMD-218ENST00000469142 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
DMD-218ENST00000469142 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
DMD-218ENST00000469142 WDR62O43379 1518 aa16.05■□□□□ 0.16
DMD-218ENST00000469142 WIZO95785 1651 aa16.03■□□□□ 0.16
DMD-218ENST00000469142 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
DMD-218ENST00000469142 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
DMD-218ENST00000469142 CFTRP13569 1480 aa15.95■□□□□ 0.14
DMD-218ENST00000469142 RSF1Q96T23 1441 aaPredicted RBP15.91■□□□□ 0.14
DMD-218ENST00000469142 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
DMD-218ENST00000469142 CYB5RLQ6IPT4 315 aa15.8■□□□□ 0.12
DMD-218ENST00000469142 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
DMD-218ENST00000469142 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
DMD-218ENST00000469142 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
DMD-218ENST00000469142 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
DMD-218ENST00000469142 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
DMD-218ENST00000469142 CCDC88BA6NC98 1476 aa15.72■□□□□ 0.11
DMD-218ENST00000469142 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
DMD-218ENST00000469142 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
DMD-218ENST00000469142 FBLN2P98095 1184 aa15.71■□□□□ 0.11
DMD-218ENST00000469142 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
DMD-218ENST00000469142 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
DMD-218ENST00000469142 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.1
DMD-218ENST00000469142 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
DMD-218ENST00000469142 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
DMD-218ENST00000469142 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
DMD-218ENST00000469142 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
DMD-218ENST00000469142 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.08
DMD-218ENST00000469142 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
DMD-218ENST00000469142 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
DMD-218ENST00000469142 SOGA1O94964 1423 aa15.51■□□□□ 0.07
DMD-218ENST00000469142 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
DMD-218ENST00000469142 TARBP1Q13395 1621 aaKnown RBP15.48■□□□□ 0.07
DMD-218ENST00000469142 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
DMD-218ENST00000469142 CHD1O14646 1710 aa15.43■□□□□ 0.06
DMD-218ENST00000469142 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
DMD-218ENST00000469142 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
DMD-218ENST00000469142 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
DMD-218ENST00000469142 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
DMD-218ENST00000469142 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
DMD-218ENST00000469142 CUX1P39880 1505 aa15.3■□□□□ 0.04
DMD-218ENST00000469142 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
DMD-218ENST00000469142 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
DMD-218ENST00000469142 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
DMD-218ENST00000469142 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.03
DMD-218ENST00000469142 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
DMD-218ENST00000469142 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
DMD-218ENST00000469142 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
DMD-218ENST00000469142 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
DMD-218ENST00000469142 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
DMD-218ENST00000469142 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
DMD-218ENST00000469142 JPH4Q96JJ6 628 aa15.08■□□□□ 0
DMD-218ENST00000469142 PBRM1Q86U86 1689 aa15.07■□□□□ 0
DMD-218ENST00000469142 NUP160Q12769 1436 aa15.07■□□□□ 0
DMD-218ENST00000469142 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
DMD-218ENST00000469142 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
DMD-218ENST00000469142 CEP170Q5SW79 1584 aa15.05■□□□□ -0
DMD-218ENST00000469142 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
DMD-218ENST00000469142 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
DMD-218ENST00000469142 NPM1P06748 294 aaKnown RBP eCLIP15.02■□□□□ -0
DMD-218ENST00000469142 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
DMD-218ENST00000469142 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
DMD-218ENST00000469142 KDM4FA0A1W2PPD8 638 aa14.92□□□□□ -0.02
DMD-218ENST00000469142 TOP2BQ02880 1626 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms