RNA–Protein interactions for RNA: ENST00000469111.5

TPRA1-207, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 5

Gene TPRA1, Length 1,007 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-207ENST00000469111 NISCHQ9Y2I1 1504 aa71.37■■■■■ 9.02
TPRA1-207ENST00000469111 CCDC180Q9P1Z9 1646 aa63.9■■■■■ 7.82
TPRA1-207ENST00000469111 ABCC9O60706 1549 aa63.46■■■■■ 7.75
TPRA1-207ENST00000469111 RB1CC1Q8TDY2 1594 aa60.6■■■■■ 7.29
TPRA1-207ENST00000469111 NACADO15069 1562 aa60.29■■■■■ 7.24
TPRA1-207ENST00000469111 DCAF8L2P0C7V8 631 aa60.01■■■■■ 7.2
TPRA1-207ENST00000469111 MYO15BQ96JP2 1530 aa59.59■■■■■ 7.13
TPRA1-207ENST00000469111 UNC13AQ9UPW8 1703 aa59.3■■■■■ 7.08
TPRA1-207ENST00000469111 ZCCHC6Q5VYS8 1495 aaKnown RBP59.25■■■■■ 7.07
TPRA1-207ENST00000469111 DNAJC5BQ9UF47 199 aa59.15■■■■■ 7.06
TPRA1-207ENST00000469111 PABPN1Q86U42 306 aaKnown RBP eCLIP59.13■■■■■ 7.06
TPRA1-207ENST00000469111 DCAF1Q9Y4B6 1507 aa58.98■■■■■ 7.03
TPRA1-207ENST00000469111 BICRAQ9NZM4 1560 aa58.84■■■■■ 7.01
TPRA1-207ENST00000469111 SCRIBQ14160 1630 aa58.24■■■■■ 6.91
TPRA1-207ENST00000469111 SHROOM4Q9ULL8 1493 aa58.08■■■■■ 6.89
TPRA1-207ENST00000469111 CC2D2AQ9P2K1 1620 aa57.38■■■■■ 6.78
TPRA1-207ENST00000469111 EIF4G1Q04637 1599 aaKnown RBP57.35■■■■■ 6.77
TPRA1-207ENST00000469111 CECR2Q9BXF3 1484 aa57.13■■■■■ 6.74
TPRA1-207ENST00000469111 NCAPD3P42695 1498 aa55.63■■■■■ 6.5
TPRA1-207ENST00000469111 SMARCA4P51532 1647 aa55.61■■■■■ 6.49
TPRA1-207ENST00000469111 ATAD2BQ9ULI0 1458 aa55.54■■■■■ 6.48
TPRA1-207ENST00000469111 SMARCA2P51531 1590 aa55.41■■■■■ 6.46
TPRA1-207ENST00000469111 BAZ1AQ9NRL2 1556 aaPredicted RBP55.38■■■■■ 6.46
TPRA1-207ENST00000469111 HMGXB3Q12766 1538 aa55.29■■■■■ 6.44
TPRA1-207ENST00000469111 PEG3Q9GZU2 1588 aa55.06■■■■■ 6.41
TPRA1-207ENST00000469111 BAZ1BQ9UIG0 1483 aaKnown RBP55.02■■■■■ 6.4
TPRA1-207ENST00000469111 MROH2BQ7Z745 1585 aa55■■■■■ 6.39
TPRA1-207ENST00000469111 ERCC6Q03468 1493 aa54.76■■■■■ 6.36
TPRA1-207ENST00000469111 NESP48681 1621 aa54.65■■■■■ 6.34
TPRA1-207ENST00000469111 CUX2O14529 1486 aa54.54■■■■■ 6.32
TPRA1-207ENST00000469111 WIZO95785 1651 aa54.39■■■■■ 6.3
TPRA1-207ENST00000469111 LAMC3Q9Y6N6 1575 aa54.34■■■■■ 6.29
TPRA1-207ENST00000469111 THOC2Q8NI27 1593 aaKnown RBP54.04■■■■■ 6.24
TPRA1-207ENST00000469111 DNAJC5Q9H3Z4 198 aa54.01■■■■■ 6.24
TPRA1-207ENST00000469111 KIF21AQ7Z4S6 1674 aa54■■■■■ 6.23
TPRA1-207ENST00000469111 RSF1Q96T23 1441 aaPredicted RBP54■■■■■ 6.23
TPRA1-207ENST00000469111 PDS5BQ9NTI5 1447 aa53.99■■■■■ 6.23
TPRA1-207ENST00000469111 CADPSQ9ULU8 1353 aa53.97■■■■■ 6.23
TPRA1-207ENST00000469111 TOP2AP11388 1531 aaKnown RBP53.71■■■■■ 6.19
TPRA1-207ENST00000469111 MRC2Q9UBG0 1479 aa53.51■■■■■ 6.16
TPRA1-207ENST00000469111 CFTRP13569 1480 aa53.45■■■■■ 6.15
TPRA1-207ENST00000469111 WDR62O43379 1518 aa53.38■■■■■ 6.14
TPRA1-207ENST00000469111 CEP164Q9UPV0 1460 aa53.38■■■■■ 6.14
TPRA1-207ENST00000469111 FANCD2Q9BXW9 1451 aa53.36■■■■■ 6.13
TPRA1-207ENST00000469111 CCDC88BA6NC98 1476 aa53.09■■■■■ 6.09
TPRA1-207ENST00000469111 PRDM2Q13029 1718 aa53.02■■■■■ 6.08
TPRA1-207ENST00000469111 URB2Q14146 1524 aaKnown RBP52.91■■■■■ 6.06
TPRA1-207ENST00000469111 TOPBP1Q92547 1522 aa52.4■■■■■ 5.98
TPRA1-207ENST00000469111 ABCC8Q09428 1581 aa52.3■■■■■ 5.96
TPRA1-207ENST00000469111 IFT140Q96RY7 1462 aa52.3■■■■■ 5.96
TPRA1-207ENST00000469111 DNMBPQ6XZF7 1577 aa52.25■■■■■ 5.96
TPRA1-207ENST00000469111 ZNF608Q9ULD9 1512 aaPredicted RBP52.18■■■■■ 5.94
TPRA1-207ENST00000469111 OSCARQ8IYS5 282 aa52.08■■■■■ 5.93
TPRA1-207ENST00000469111 EIF4G3O43432 1585 aaKnown RBP51.94■■■■■ 5.91
TPRA1-207ENST00000469111 TARBP1Q13395 1621 aaKnown RBP51.93■■■■■ 5.9
TPRA1-207ENST00000469111 POLA1P09884 1462 aaPredicted RBP51.9■■■■■ 5.9
TPRA1-207ENST00000469111 SUPT5HO00267 1087 aaKnown RBP51.89■■■■■ 5.9
TPRA1-207ENST00000469111 TRIM41Q8WV44 630 aa51.81■■■■■ 5.88
TPRA1-207ENST00000469111 AQRO60306 1485 aaKnown RBP eCLIP51.75■■■■■ 5.887e-7■■■■□ 26.4
TPRA1-207ENST00000469111 RAD54L2Q9Y4B4 1467 aa51.69■■■■■ 5.87
TPRA1-207ENST00000469111 CUX1P39880 1505 aa51.66■■■■■ 5.86
TPRA1-207ENST00000469111 SOGA1O94964 1423 aa51.64■■■■■ 5.86
TPRA1-207ENST00000469111 FGD5Q6ZNL6 1462 aa51.63■■■■■ 5.86
TPRA1-207ENST00000469111 CHD1O14646 1710 aa51.5■■■■■ 5.83
TPRA1-207ENST00000469111 TDRD9Q8NDG6 1382 aaKnown RBP51.49■■■■■ 5.83
TPRA1-207ENST00000469111 WDR97A6NE52 1622 aa51.43■■■■■ 5.82
TPRA1-207ENST00000469111 RIMBP3CA6NJZ7 1639 aa51.42■■■■■ 5.82
TPRA1-207ENST00000469111 RIMBP3BA6NNM3 1639 aa51.42■■■■■ 5.82
TPRA1-207ENST00000469111 RIMBP3Q9UFD9 1639 aa51.42■■■■■ 5.82
TPRA1-207ENST00000469111 FBLN2P98095 1184 aa51.3■■■■■ 5.8
TPRA1-207ENST00000469111 ARHGEF11O15085 1522 aa51.28■■■■■ 5.8
TPRA1-207ENST00000469111 SNAPC4Q5SXM2 1469 aa51.25■■■■■ 5.79
TPRA1-207ENST00000469111 GRIN2BQ13224 1484 aa51.16■■■■■ 5.78
TPRA1-207ENST00000469111 MAGI1Q96QZ7 1491 aaPredicted RBP51.13■■■■■ 5.78
TPRA1-207ENST00000469111 ABCA10Q8WWZ4 1543 aa51.08■■■■■ 5.77
TPRA1-207ENST00000469111 PBRM1Q86U86 1689 aa51.05■■■■■ 5.76
TPRA1-207ENST00000469111 GAPVD1Q14C86 1478 aa51.04■■■■■ 5.76
TPRA1-207ENST00000469111 CHMP7Q8WUX9 453 aaPredicted RBP51■■■■■ 5.75
TPRA1-207ENST00000469111 ABCA5Q8WWZ7 1642 aa50.98■■■■■ 5.75
TPRA1-207ENST00000469111 BIVM-ERCC5R4GMW8 1640 aa50.96■■■■■ 5.75
TPRA1-207ENST00000469111 TOP2BQ02880 1626 aa50.95■■■■■ 5.75
TPRA1-207ENST00000469111 SYNJ2O15056 1496 aa50.95■■■■■ 5.75
TPRA1-207ENST00000469111 WRNQ14191 1432 aaPredicted RBP eCLIP50.94■■■■■ 5.74
TPRA1-207ENST00000469111 SYNJ1O43426 1573 aa50.9■■■■■ 5.74
TPRA1-207ENST00000469111 CLASP1Q7Z460 1538 aa50.89■■■■■ 5.74
TPRA1-207ENST00000469111 CYB5RLQ6IPT4 315 aa50.84■■■■■ 5.73
TPRA1-207ENST00000469111 ARAP1Q96P48 1450 aa50.81■■■■■ 5.72
TPRA1-207ENST00000469111 ADAMTS12P58397 1594 aa50.56■■■■■ 5.68
TPRA1-207ENST00000469111 GRIN2AQ12879 1464 aa50.52■■■■■ 5.68
TPRA1-207ENST00000469111 ERICH3Q5RHP9 1530 aa50.44■■■■■ 5.67
TPRA1-207ENST00000469111 FHAD1B1AJZ9 1412 aa50.4■■■■■ 5.66
TPRA1-207ENST00000469111 CEP170Q5SW79 1584 aa50.34■■■■■ 5.65
TPRA1-207ENST00000469111 NUP160Q12769 1436 aa50.33■■■■■ 5.65
TPRA1-207ENST00000469111 TRHP20396 242 aaPredicted RBP50.14■■■■■ 5.62
TPRA1-207ENST00000469111 ERCC6L2Q5T890 1561 aa50.13■■■■■ 5.62
TPRA1-207ENST00000469111 SHROOM2Q13796 1616 aa50.09■■■■■ 5.61
TPRA1-207ENST00000469111 KIF27Q86VH2 1401 aa49.94■■■■■ 5.58
TPRA1-207ENST00000469111 IGF1RP08069 1367 aa49.87■■■■■ 5.57
TPRA1-207ENST00000469111 RUSC2Q8N2Y8 1516 aa49.84■■■■■ 5.57
TPRA1-207ENST00000469111 CUL7Q14999 1698 aa49.8■■■■■ 5.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms