RNA–Protein interactions for RNA: ENST00000469065.1

SEMA4A-211, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-211ENST00000469065 NISCHQ9Y2I1 1504 aa27.28■■□□□ 1.96
SEMA4A-211ENST00000469065 ABCC9O60706 1549 aa25.95■■□□□ 1.74
SEMA4A-211ENST00000469065 DNAJC5BQ9UF47 199 aa25.18■■□□□ 1.62
SEMA4A-211ENST00000469065 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
SEMA4A-211ENST00000469065 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
SEMA4A-211ENST00000469065 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
SEMA4A-211ENST00000469065 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
SEMA4A-211ENST00000469065 NACADO15069 1562 aa23.95■■□□□ 1.43
SEMA4A-211ENST00000469065 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
SEMA4A-211ENST00000469065 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
SEMA4A-211ENST00000469065 UNC13AQ9UPW8 1703 aa23.49■■□□□ 1.35
SEMA4A-211ENST00000469065 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
SEMA4A-211ENST00000469065 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
SEMA4A-211ENST00000469065 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
SEMA4A-211ENST00000469065 MYO15BQ96JP2 1530 aa23.29■■□□□ 1.32
SEMA4A-211ENST00000469065 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
SEMA4A-211ENST00000469065 CUX2O14529 1486 aa22.98■■□□□ 1.27
SEMA4A-211ENST00000469065 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
SEMA4A-211ENST00000469065 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
SEMA4A-211ENST00000469065 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
SEMA4A-211ENST00000469065 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
SEMA4A-211ENST00000469065 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
SEMA4A-211ENST00000469065 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
SEMA4A-211ENST00000469065 THOC2Q8NI27 1593 aaKnown RBP21.89■■□□□ 1.09
SEMA4A-211ENST00000469065 NESP48681 1621 aa21.88■■□□□ 1.09
SEMA4A-211ENST00000469065 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
SEMA4A-211ENST00000469065 AEBP2Q6ZN18 517 aaPredicted RBP21.84■■□□□ 1.09
SEMA4A-211ENST00000469065 PDS5BQ9NTI5 1447 aa21.82■■□□□ 1.08
SEMA4A-211ENST00000469065 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
SEMA4A-211ENST00000469065 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
SEMA4A-211ENST00000469065 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
SEMA4A-211ENST00000469065 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
SEMA4A-211ENST00000469065 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
SEMA4A-211ENST00000469065 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
SEMA4A-211ENST00000469065 KIF21AQ7Z4S6 1674 aa21.56■■□□□ 1.04
SEMA4A-211ENST00000469065 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
SEMA4A-211ENST00000469065 TRHP20396 242 aaPredicted RBP21.54■■□□□ 1.04
SEMA4A-211ENST00000469065 SMARCA4P51532 1647 aa21.46■■□□□ 1.03
SEMA4A-211ENST00000469065 WDR62O43379 1518 aa21.45■■□□□ 1.02
SEMA4A-211ENST00000469065 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
SEMA4A-211ENST00000469065 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
SEMA4A-211ENST00000469065 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
SEMA4A-211ENST00000469065 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
SEMA4A-211ENST00000469065 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
SEMA4A-211ENST00000469065 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
SEMA4A-211ENST00000469065 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
SEMA4A-211ENST00000469065 ARHGEF11O15085 1522 aa21.27■■□□□ 1
SEMA4A-211ENST00000469065 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
SEMA4A-211ENST00000469065 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
SEMA4A-211ENST00000469065 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
SEMA4A-211ENST00000469065 IFT140Q96RY7 1462 aa20.92■□□□□ 0.94
SEMA4A-211ENST00000469065 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
SEMA4A-211ENST00000469065 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
SEMA4A-211ENST00000469065 CFTRP13569 1480 aa20.88■□□□□ 0.93
SEMA4A-211ENST00000469065 FBLN2P98095 1184 aa20.82■□□□□ 0.92
SEMA4A-211ENST00000469065 ILDR1Q86SU0 546 aaPredicted RBP20.81■□□□□ 0.92
SEMA4A-211ENST00000469065 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
SEMA4A-211ENST00000469065 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
SEMA4A-211ENST00000469065 CHD1O14646 1710 aa20.64■□□□□ 0.9
SEMA4A-211ENST00000469065 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
SEMA4A-211ENST00000469065 WIZO95785 1651 aa20.57■□□□□ 0.88
SEMA4A-211ENST00000469065 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
SEMA4A-211ENST00000469065 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
SEMA4A-211ENST00000469065 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.88
SEMA4A-211ENST00000469065 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
SEMA4A-211ENST00000469065 PRDM2Q13029 1718 aa20.48■□□□□ 0.87
SEMA4A-211ENST00000469065 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
SEMA4A-211ENST00000469065 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
SEMA4A-211ENST00000469065 DNMBPQ6XZF7 1577 aa20.39■□□□□ 0.85
SEMA4A-211ENST00000469065 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
SEMA4A-211ENST00000469065 TOP2AP11388 1531 aaKnown RBP20.36■□□□□ 0.85
SEMA4A-211ENST00000469065 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
SEMA4A-211ENST00000469065 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
SEMA4A-211ENST00000469065 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
SEMA4A-211ENST00000469065 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
SEMA4A-211ENST00000469065 SOGA1O94964 1423 aa20.27■□□□□ 0.83
SEMA4A-211ENST00000469065 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
SEMA4A-211ENST00000469065 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
SEMA4A-211ENST00000469065 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
SEMA4A-211ENST00000469065 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
SEMA4A-211ENST00000469065 NPM1P06748 294 aaKnown RBP eCLIP20.17■□□□□ 0.82
SEMA4A-211ENST00000469065 FAM69CQ0P6D2 419 aa20.15■□□□□ 0.82
SEMA4A-211ENST00000469065 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
SEMA4A-211ENST00000469065 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
SEMA4A-211ENST00000469065 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
SEMA4A-211ENST00000469065 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
SEMA4A-211ENST00000469065 KIF13AQ9H1H9 1805 aa20.07■□□□□ 0.8
SEMA4A-211ENST00000469065 KDM6BO15054 1643 aa20.03■□□□□ 0.8
SEMA4A-211ENST00000469065 ABCC10Q5T3U5 1492 aa20.02■□□□□ 0.8
SEMA4A-211ENST00000469065 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
SEMA4A-211ENST00000469065 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
SEMA4A-211ENST00000469065 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
SEMA4A-211ENST00000469065 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
SEMA4A-211ENST00000469065 MAPKBP1O60336 1514 aa19.87■□□□□ 0.77
SEMA4A-211ENST00000469065 GRIN2AQ12879 1464 aa19.87■□□□□ 0.77
SEMA4A-211ENST00000469065 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
SEMA4A-211ENST00000469065 LMTK3Q96Q04 1460 aa19.85■□□□□ 0.77
SEMA4A-211ENST00000469065 NUP160Q12769 1436 aa19.84■□□□□ 0.77
SEMA4A-211ENST00000469065 DIP2BQ9P265 1576 aa19.82■□□□□ 0.76
SEMA4A-211ENST00000469065 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms