RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
TRAIP-202ENST00000469027 ABCC9O60706 1549 aa26.39■■□□□ 1.81
TRAIP-202ENST00000469027 DNAJC5BQ9UF47 199 aa25.62■■□□□ 1.69
TRAIP-202ENST00000469027 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
TRAIP-202ENST00000469027 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
TRAIP-202ENST00000469027 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
TRAIP-202ENST00000469027 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
TRAIP-202ENST00000469027 NACADO15069 1562 aa24.12■■□□□ 1.45
TRAIP-202ENST00000469027 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
TRAIP-202ENST00000469027 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
TRAIP-202ENST00000469027 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
TRAIP-202ENST00000469027 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
TRAIP-202ENST00000469027 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
TRAIP-202ENST00000469027 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
TRAIP-202ENST00000469027 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
TRAIP-202ENST00000469027 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
TRAIP-202ENST00000469027 CUX2O14529 1486 aa23.11■■□□□ 1.29
TRAIP-202ENST00000469027 SCRIBQ14160 1630 aa23.04■■□□□ 1.28
TRAIP-202ENST00000469027 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
TRAIP-202ENST00000469027 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
TRAIP-202ENST00000469027 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
TRAIP-202ENST00000469027 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
TRAIP-202ENST00000469027 NESP48681 1621 aa22.34■■□□□ 1.17
TRAIP-202ENST00000469027 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
TRAIP-202ENST00000469027 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
TRAIP-202ENST00000469027 SMARCA2P51531 1590 aa22.17■■□□□ 1.14
TRAIP-202ENST00000469027 ATAD2BQ9ULI0 1458 aa22.08■■□□□ 1.12
TRAIP-202ENST00000469027 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
TRAIP-202ENST00000469027 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
TRAIP-202ENST00000469027 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
TRAIP-202ENST00000469027 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
TRAIP-202ENST00000469027 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
TRAIP-202ENST00000469027 PDS5BQ9NTI5 1447 aa21.91■■□□□ 1.1
TRAIP-202ENST00000469027 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
TRAIP-202ENST00000469027 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
TRAIP-202ENST00000469027 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
TRAIP-202ENST00000469027 MRC2Q9UBG0 1479 aa21.78■■□□□ 1.08
TRAIP-202ENST00000469027 RIMBP3CA6NJZ7 1639 aa21.75■■□□□ 1.07
TRAIP-202ENST00000469027 RIMBP3BA6NNM3 1639 aa21.75■■□□□ 1.07
TRAIP-202ENST00000469027 RIMBP3Q9UFD9 1639 aa21.75■■□□□ 1.07
TRAIP-202ENST00000469027 WDR62O43379 1518 aa21.72■■□□□ 1.07
TRAIP-202ENST00000469027 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
TRAIP-202ENST00000469027 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.04
TRAIP-202ENST00000469027 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
TRAIP-202ENST00000469027 CYB5RLQ6IPT4 315 aa21.54■■□□□ 1.04
TRAIP-202ENST00000469027 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
TRAIP-202ENST00000469027 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
TRAIP-202ENST00000469027 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
TRAIP-202ENST00000469027 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
TRAIP-202ENST00000469027 ARAP1Q96P48 1450 aa21.27■■□□□ 1
TRAIP-202ENST00000469027 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
TRAIP-202ENST00000469027 ZNF608Q9ULD9 1512 aaPredicted RBP21.17■□□□□ 0.98
TRAIP-202ENST00000469027 CFTRP13569 1480 aa21.08■□□□□ 0.97
TRAIP-202ENST00000469027 IFT140Q96RY7 1462 aa21.08■□□□□ 0.97
TRAIP-202ENST00000469027 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
TRAIP-202ENST00000469027 CHD1O14646 1710 aa21.06■□□□□ 0.96
TRAIP-202ENST00000469027 FBLN2P98095 1184 aa21.05■□□□□ 0.96
TRAIP-202ENST00000469027 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
TRAIP-202ENST00000469027 WIZO95785 1651 aa21.01■□□□□ 0.95
TRAIP-202ENST00000469027 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
TRAIP-202ENST00000469027 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.936e-9■■■■■ 45.1
TRAIP-202ENST00000469027 TOPBP1Q92547 1522 aa20.83■□□□□ 0.92
TRAIP-202ENST00000469027 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
TRAIP-202ENST00000469027 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
TRAIP-202ENST00000469027 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
TRAIP-202ENST00000469027 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
TRAIP-202ENST00000469027 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
TRAIP-202ENST00000469027 CHMP7Q8WUX9 453 aaPredicted RBP20.66■□□□□ 0.9
TRAIP-202ENST00000469027 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
TRAIP-202ENST00000469027 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
TRAIP-202ENST00000469027 TOP2AP11388 1531 aaKnown RBP20.65■□□□□ 0.9
TRAIP-202ENST00000469027 SNAPC4Q5SXM2 1469 aa20.62■□□□□ 0.89
TRAIP-202ENST00000469027 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
TRAIP-202ENST00000469027 POLA1P09884 1462 aaPredicted RBP20.55■□□□□ 0.88
TRAIP-202ENST00000469027 RAD54L2Q9Y4B4 1467 aa20.52■□□□□ 0.88
TRAIP-202ENST00000469027 KDM4FA0A1W2PPD8 638 aa20.51■□□□□ 0.87
TRAIP-202ENST00000469027 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
TRAIP-202ENST00000469027 SOGA1O94964 1423 aa20.46■□□□□ 0.87
TRAIP-202ENST00000469027 KIF13AQ9H1H9 1805 aa20.45■□□□□ 0.86
TRAIP-202ENST00000469027 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
TRAIP-202ENST00000469027 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
TRAIP-202ENST00000469027 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
TRAIP-202ENST00000469027 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
TRAIP-202ENST00000469027 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
TRAIP-202ENST00000469027 FAM69CQ0P6D2 419 aa20.32■□□□□ 0.84
TRAIP-202ENST00000469027 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
TRAIP-202ENST00000469027 KDM6BO15054 1643 aa20.28■□□□□ 0.84
TRAIP-202ENST00000469027 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
TRAIP-202ENST00000469027 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
TRAIP-202ENST00000469027 ABCC10Q5T3U5 1492 aa20.2■□□□□ 0.82
TRAIP-202ENST00000469027 HECW2Q9P2P5 1572 aa20.2■□□□□ 0.82
TRAIP-202ENST00000469027 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
TRAIP-202ENST00000469027 NPM1P06748 294 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRAIP-202ENST00000469027 ADGRL1O94910 1474 aa20.13■□□□□ 0.81
TRAIP-202ENST00000469027 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
TRAIP-202ENST00000469027 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
TRAIP-202ENST00000469027 TSPOAP1O95153 1857 aa20.12■□□□□ 0.81
TRAIP-202ENST00000469027 CUX1P39880 1505 aa20.07■□□□□ 0.8
TRAIP-202ENST00000469027 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
TRAIP-202ENST00000469027 NUP160Q12769 1436 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms