RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
TGFBR3-205ENST00000468996 ABCC9O60706 1549 aa23.29■■□□□ 1.32
TGFBR3-205ENST00000468996 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
TGFBR3-205ENST00000468996 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
TGFBR3-205ENST00000468996 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
TGFBR3-205ENST00000468996 NACADO15069 1562 aa22.02■■□□□ 1.12
TGFBR3-205ENST00000468996 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
TGFBR3-205ENST00000468996 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
TGFBR3-205ENST00000468996 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
TGFBR3-205ENST00000468996 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
TGFBR3-205ENST00000468996 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
TGFBR3-205ENST00000468996 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
TGFBR3-205ENST00000468996 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
TGFBR3-205ENST00000468996 SCRIBQ14160 1630 aa21.32■■□□□ 1
TGFBR3-205ENST00000468996 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
TGFBR3-205ENST00000468996 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
TGFBR3-205ENST00000468996 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
TGFBR3-205ENST00000468996 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
TGFBR3-205ENST00000468996 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
TGFBR3-205ENST00000468996 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
TGFBR3-205ENST00000468996 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
TGFBR3-205ENST00000468996 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
TGFBR3-205ENST00000468996 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
TGFBR3-205ENST00000468996 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
TGFBR3-205ENST00000468996 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
TGFBR3-205ENST00000468996 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
TGFBR3-205ENST00000468996 ERCC6Q03468 1493 aa20.11■□□□□ 0.81
TGFBR3-205ENST00000468996 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
TGFBR3-205ENST00000468996 NESP48681 1621 aa20.04■□□□□ 0.8
TGFBR3-205ENST00000468996 CUX2O14529 1486 aa19.92■□□□□ 0.78
TGFBR3-205ENST00000468996 WIZO95785 1651 aa19.9■□□□□ 0.78
TGFBR3-205ENST00000468996 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
TGFBR3-205ENST00000468996 LAMC3Q9Y6N6 1575 aa19.84■□□□□ 0.77
TGFBR3-205ENST00000468996 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
TGFBR3-205ENST00000468996 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
TGFBR3-205ENST00000468996 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
TGFBR3-205ENST00000468996 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
TGFBR3-205ENST00000468996 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
TGFBR3-205ENST00000468996 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
TGFBR3-205ENST00000468996 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
TGFBR3-205ENST00000468996 CFTRP13569 1480 aa19.56■□□□□ 0.72
TGFBR3-205ENST00000468996 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
TGFBR3-205ENST00000468996 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
TGFBR3-205ENST00000468996 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
TGFBR3-205ENST00000468996 WDR62O43379 1518 aa19.48■□□□□ 0.71
TGFBR3-205ENST00000468996 URB2Q14146 1524 aaKnown RBP19.36■□□□□ 0.69
TGFBR3-205ENST00000468996 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
TGFBR3-205ENST00000468996 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
TGFBR3-205ENST00000468996 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
TGFBR3-205ENST00000468996 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
TGFBR3-205ENST00000468996 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
TGFBR3-205ENST00000468996 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
TGFBR3-205ENST00000468996 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
TGFBR3-205ENST00000468996 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
TGFBR3-205ENST00000468996 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
TGFBR3-205ENST00000468996 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.641e-6■■□□□ 14.5
TGFBR3-205ENST00000468996 SOGA1O94964 1423 aa19■□□□□ 0.63
TGFBR3-205ENST00000468996 FBLN2P98095 1184 aa19■□□□□ 0.63
TGFBR3-205ENST00000468996 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
TGFBR3-205ENST00000468996 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
TGFBR3-205ENST00000468996 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
TGFBR3-205ENST00000468996 TARBP1Q13395 1621 aaKnown RBP18.95■□□□□ 0.62
TGFBR3-205ENST00000468996 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
TGFBR3-205ENST00000468996 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
TGFBR3-205ENST00000468996 CUX1P39880 1505 aa18.9■□□□□ 0.62
TGFBR3-205ENST00000468996 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
TGFBR3-205ENST00000468996 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
TGFBR3-205ENST00000468996 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
TGFBR3-205ENST00000468996 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
TGFBR3-205ENST00000468996 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
TGFBR3-205ENST00000468996 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
TGFBR3-205ENST00000468996 CHD1O14646 1710 aa18.77■□□□□ 0.59
TGFBR3-205ENST00000468996 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
TGFBR3-205ENST00000468996 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
TGFBR3-205ENST00000468996 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
TGFBR3-205ENST00000468996 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.59
TGFBR3-205ENST00000468996 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
TGFBR3-205ENST00000468996 WDR97A6NE52 1622 aa18.71■□□□□ 0.58
TGFBR3-205ENST00000468996 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
TGFBR3-205ENST00000468996 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
TGFBR3-205ENST00000468996 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
TGFBR3-205ENST00000468996 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
TGFBR3-205ENST00000468996 PBRM1Q86U86 1689 aa18.59■□□□□ 0.57
TGFBR3-205ENST00000468996 ARAP1Q96P48 1450 aa18.58■□□□□ 0.57
TGFBR3-205ENST00000468996 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.56
TGFBR3-205ENST00000468996 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
TGFBR3-205ENST00000468996 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
TGFBR3-205ENST00000468996 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
TGFBR3-205ENST00000468996 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
TGFBR3-205ENST00000468996 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
TGFBR3-205ENST00000468996 ADAMTS12P58397 1594 aa18.44■□□□□ 0.54
TGFBR3-205ENST00000468996 ERICH3Q5RHP9 1530 aa18.44■□□□□ 0.54
TGFBR3-205ENST00000468996 NUP160Q12769 1436 aa18.4■□□□□ 0.54
TGFBR3-205ENST00000468996 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
TGFBR3-205ENST00000468996 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
TGFBR3-205ENST00000468996 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
TGFBR3-205ENST00000468996 IGF1RP08069 1367 aa18.35■□□□□ 0.53
TGFBR3-205ENST00000468996 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
TGFBR3-205ENST00000468996 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
TGFBR3-205ENST00000468996 SHROOM2Q13796 1616 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms