RNA–Protein interactions for RNA: ENST00000468978.2

MUC1-217, Transcript of mucin 1, cell surface associated, humanhuman

TSL 2

Gene MUC1, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-217ENST00000468978 NISCHQ9Y2I1 1504 aa35.12■■■■□ 3.21
MUC1-217ENST00000468978 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
MUC1-217ENST00000468978 ABCC9O60706 1549 aa30.93■■■□□ 2.54
MUC1-217ENST00000468978 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
MUC1-217ENST00000468978 NACADO15069 1562 aa29.55■■■□□ 2.32
MUC1-217ENST00000468978 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
MUC1-217ENST00000468978 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
MUC1-217ENST00000468978 DCAF8L2P0C7V8 631 aa29.19■■■□□ 2.26
MUC1-217ENST00000468978 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
MUC1-217ENST00000468978 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
MUC1-217ENST00000468978 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
MUC1-217ENST00000468978 PABPN1Q86U42 306 aaKnown RBP eCLIP28.8■■■□□ 2.2
MUC1-217ENST00000468978 DNAJC5BQ9UF47 199 aa28.74■■■□□ 2.19
MUC1-217ENST00000468978 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
MUC1-217ENST00000468978 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
MUC1-217ENST00000468978 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
MUC1-217ENST00000468978 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
MUC1-217ENST00000468978 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.05
MUC1-217ENST00000468978 SMARCA4P51532 1647 aa27.33■■□□□ 1.97
MUC1-217ENST00000468978 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
MUC1-217ENST00000468978 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
MUC1-217ENST00000468978 BAZ1AQ9NRL2 1556 aaPredicted RBP27.21■■□□□ 1.95
MUC1-217ENST00000468978 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
MUC1-217ENST00000468978 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
MUC1-217ENST00000468978 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
MUC1-217ENST00000468978 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
MUC1-217ENST00000468978 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
MUC1-217ENST00000468978 WIZO95785 1651 aa26.76■■□□□ 1.87
MUC1-217ENST00000468978 NESP48681 1621 aa26.72■■□□□ 1.87
MUC1-217ENST00000468978 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
MUC1-217ENST00000468978 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
MUC1-217ENST00000468978 LAMC3Q9Y6N6 1575 aa26.6■■□□□ 1.85
MUC1-217ENST00000468978 CUX2O14529 1486 aa26.55■■□□□ 1.84
MUC1-217ENST00000468978 THOC2Q8NI27 1593 aaKnown RBP26.45■■□□□ 1.82
MUC1-217ENST00000468978 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
MUC1-217ENST00000468978 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
MUC1-217ENST00000468978 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
MUC1-217ENST00000468978 PDS5BQ9NTI5 1447 aa26.36■■□□□ 1.81
MUC1-217ENST00000468978 CFTRP13569 1480 aa26.26■■□□□ 1.79
MUC1-217ENST00000468978 DNAJC5Q9H3Z4 198 aa26.25■■□□□ 1.79
MUC1-217ENST00000468978 MRC2Q9UBG0 1479 aa26.16■■□□□ 1.78
MUC1-217ENST00000468978 WDR62O43379 1518 aa26.14■■□□□ 1.78
MUC1-217ENST00000468978 FANCD2Q9BXW9 1451 aa26.12■■□□□ 1.77
MUC1-217ENST00000468978 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
MUC1-217ENST00000468978 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
MUC1-217ENST00000468978 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
MUC1-217ENST00000468978 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
MUC1-217ENST00000468978 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
MUC1-217ENST00000468978 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
MUC1-217ENST00000468978 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
MUC1-217ENST00000468978 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
MUC1-217ENST00000468978 ZNF608Q9ULD9 1512 aaPredicted RBP25.54■■□□□ 1.68
MUC1-217ENST00000468978 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
MUC1-217ENST00000468978 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
MUC1-217ENST00000468978 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
MUC1-217ENST00000468978 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
MUC1-217ENST00000468978 CUX1P39880 1505 aa25.42■■□□□ 1.66
MUC1-217ENST00000468978 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
MUC1-217ENST00000468978 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
MUC1-217ENST00000468978 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.64
MUC1-217ENST00000468978 SOGA1O94964 1423 aa25.29■■□□□ 1.64
MUC1-217ENST00000468978 OSCARQ8IYS5 282 aa25.27■■□□□ 1.64
MUC1-217ENST00000468978 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
MUC1-217ENST00000468978 TDRD9Q8NDG6 1382 aaKnown RBP25.19■■□□□ 1.62
MUC1-217ENST00000468978 CHD1O14646 1710 aa25.17■■□□□ 1.62
MUC1-217ENST00000468978 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
MUC1-217ENST00000468978 TOP2BQ02880 1626 aa25.11■■□□□ 1.61
MUC1-217ENST00000468978 ABCA10Q8WWZ4 1543 aa25.11■■□□□ 1.61
MUC1-217ENST00000468978 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
MUC1-217ENST00000468978 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
MUC1-217ENST00000468978 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
MUC1-217ENST00000468978 ABCA5Q8WWZ7 1642 aa25.07■■□□□ 1.6
MUC1-217ENST00000468978 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
MUC1-217ENST00000468978 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
MUC1-217ENST00000468978 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
MUC1-217ENST00000468978 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
MUC1-217ENST00000468978 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
MUC1-217ENST00000468978 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
MUC1-217ENST00000468978 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
MUC1-217ENST00000468978 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
MUC1-217ENST00000468978 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
MUC1-217ENST00000468978 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
MUC1-217ENST00000468978 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
MUC1-217ENST00000468978 FBLN2P98095 1184 aa24.9■■□□□ 1.58
MUC1-217ENST00000468978 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
MUC1-217ENST00000468978 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
MUC1-217ENST00000468978 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
MUC1-217ENST00000468978 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
MUC1-217ENST00000468978 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
MUC1-217ENST00000468978 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
MUC1-217ENST00000468978 NUP160Q12769 1436 aa24.7■■□□□ 1.55
MUC1-217ENST00000468978 CEP170Q5SW79 1584 aa24.69■■□□□ 1.54
MUC1-217ENST00000468978 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
MUC1-217ENST00000468978 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
MUC1-217ENST00000468978 ERCC6L2Q5T890 1561 aa24.56■■□□□ 1.52
MUC1-217ENST00000468978 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
MUC1-217ENST00000468978 IGF1RP08069 1367 aa24.53■■□□□ 1.52
MUC1-217ENST00000468978 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
MUC1-217ENST00000468978 CUL7Q14999 1698 aa24.49■■□□□ 1.51
MUC1-217ENST00000468978 PRG4Q92954 1404 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms