RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
SDCCAG3-209ENST00000468963 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
SDCCAG3-209ENST00000468963 ABCC9O60706 1549 aa32.89■■■□□ 2.86
SDCCAG3-209ENST00000468963 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
SDCCAG3-209ENST00000468963 NACADO15069 1562 aa31.18■■■□□ 2.58
SDCCAG3-209ENST00000468963 DCAF8L2P0C7V8 631 aa31.13■■■□□ 2.57
SDCCAG3-209ENST00000468963 DNAJC5BQ9UF47 199 aa30.88■■■□□ 2.53
SDCCAG3-209ENST00000468963 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
SDCCAG3-209ENST00000468963 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
SDCCAG3-209ENST00000468963 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
SDCCAG3-209ENST00000468963 ZCCHC6Q5VYS8 1495 aaKnown RBP30.57■■■□□ 2.48
SDCCAG3-209ENST00000468963 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
SDCCAG3-209ENST00000468963 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
SDCCAG3-209ENST00000468963 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
SDCCAG3-209ENST00000468963 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
SDCCAG3-209ENST00000468963 CC2D2AQ9P2K1 1620 aa29.7■■■□□ 2.34
SDCCAG3-209ENST00000468963 EIF4G1Q04637 1599 aaKnown RBP29.68■■■□□ 2.34
SDCCAG3-209ENST00000468963 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
SDCCAG3-209ENST00000468963 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
SDCCAG3-209ENST00000468963 ATAD2BQ9ULI0 1458 aa28.76■■■□□ 2.19
SDCCAG3-209ENST00000468963 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
SDCCAG3-209ENST00000468963 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
SDCCAG3-209ENST00000468963 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
SDCCAG3-209ENST00000468963 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
SDCCAG3-209ENST00000468963 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
SDCCAG3-209ENST00000468963 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
SDCCAG3-209ENST00000468963 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-209ENST00000468963 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
SDCCAG3-209ENST00000468963 NESP48681 1621 aa28.31■■■□□ 2.12
SDCCAG3-209ENST00000468963 CUX2O14529 1486 aa28.27■■■□□ 2.12
SDCCAG3-209ENST00000468963 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
SDCCAG3-209ENST00000468963 LAMC3Q9Y6N6 1575 aa28.09■■■□□ 2.09
SDCCAG3-209ENST00000468963 WIZO95785 1651 aa28.05■■■□□ 2.08
SDCCAG3-209ENST00000468963 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
SDCCAG3-209ENST00000468963 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
SDCCAG3-209ENST00000468963 THOC2Q8NI27 1593 aaKnown RBP27.93■■■□□ 2.06
SDCCAG3-209ENST00000468963 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
SDCCAG3-209ENST00000468963 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
SDCCAG3-209ENST00000468963 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.02
SDCCAG3-209ENST00000468963 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
SDCCAG3-209ENST00000468963 CFTRP13569 1480 aa27.67■■■□□ 2.02
SDCCAG3-209ENST00000468963 FANCD2Q9BXW9 1451 aa27.61■■■□□ 2.01
SDCCAG3-209ENST00000468963 WDR62O43379 1518 aa27.61■■■□□ 2.01
SDCCAG3-209ENST00000468963 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
SDCCAG3-209ENST00000468963 CCDC88BA6NC98 1476 aa27.46■■□□□ 1.99
SDCCAG3-209ENST00000468963 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
SDCCAG3-209ENST00000468963 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
SDCCAG3-209ENST00000468963 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
SDCCAG3-209ENST00000468963 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
SDCCAG3-209ENST00000468963 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
SDCCAG3-209ENST00000468963 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
SDCCAG3-209ENST00000468963 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
SDCCAG3-209ENST00000468963 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
SDCCAG3-209ENST00000468963 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
SDCCAG3-209ENST00000468963 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
SDCCAG3-209ENST00000468963 AQRO60306 1485 aaKnown RBP eCLIP26.83■■□□□ 1.892e-6■■□□□ 13.2
SDCCAG3-209ENST00000468963 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
SDCCAG3-209ENST00000468963 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
SDCCAG3-209ENST00000468963 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
SDCCAG3-209ENST00000468963 RAD54L2Q9Y4B4 1467 aa26.76■■□□□ 1.87
SDCCAG3-209ENST00000468963 SOGA1O94964 1423 aa26.76■■□□□ 1.87
SDCCAG3-209ENST00000468963 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
SDCCAG3-209ENST00000468963 CUX1P39880 1505 aa26.69■■□□□ 1.86
SDCCAG3-209ENST00000468963 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
SDCCAG3-209ENST00000468963 RIMBP3CA6NJZ7 1639 aa26.62■■□□□ 1.85
SDCCAG3-209ENST00000468963 RIMBP3BA6NNM3 1639 aa26.62■■□□□ 1.85
SDCCAG3-209ENST00000468963 RIMBP3Q9UFD9 1639 aa26.62■■□□□ 1.85
SDCCAG3-209ENST00000468963 FBLN2P98095 1184 aa26.62■■□□□ 1.85
SDCCAG3-209ENST00000468963 ARHGEF11O15085 1522 aa26.57■■□□□ 1.84
SDCCAG3-209ENST00000468963 CHD1O14646 1710 aa26.56■■□□□ 1.84
SDCCAG3-209ENST00000468963 WDR97A6NE52 1622 aa26.54■■□□□ 1.84
SDCCAG3-209ENST00000468963 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
SDCCAG3-209ENST00000468963 GRIN2BQ13224 1484 aa26.47■■□□□ 1.83
SDCCAG3-209ENST00000468963 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
SDCCAG3-209ENST00000468963 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
SDCCAG3-209ENST00000468963 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
SDCCAG3-209ENST00000468963 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
SDCCAG3-209ENST00000468963 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
SDCCAG3-209ENST00000468963 SYNJ2O15056 1496 aa26.36■■□□□ 1.81
SDCCAG3-209ENST00000468963 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
SDCCAG3-209ENST00000468963 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
SDCCAG3-209ENST00000468963 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
SDCCAG3-209ENST00000468963 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
SDCCAG3-209ENST00000468963 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
SDCCAG3-209ENST00000468963 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
SDCCAG3-209ENST00000468963 TOP2BQ02880 1626 aa26.27■■□□□ 1.8
SDCCAG3-209ENST00000468963 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
SDCCAG3-209ENST00000468963 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
SDCCAG3-209ENST00000468963 FHAD1B1AJZ9 1412 aa26.08■■□□□ 1.77
SDCCAG3-209ENST00000468963 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
SDCCAG3-209ENST00000468963 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
SDCCAG3-209ENST00000468963 NUP160Q12769 1436 aa26.05■■□□□ 1.76
SDCCAG3-209ENST00000468963 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
SDCCAG3-209ENST00000468963 CEP170Q5SW79 1584 aa26■■□□□ 1.75
SDCCAG3-209ENST00000468963 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
SDCCAG3-209ENST00000468963 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
SDCCAG3-209ENST00000468963 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
SDCCAG3-209ENST00000468963 IGF1RP08069 1367 aa25.86■■□□□ 1.73
SDCCAG3-209ENST00000468963 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
SDCCAG3-209ENST00000468963 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms