RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
SYN3-210ENST00000468922 ABCC9O60706 1549 aa19.31■□□□□ 0.68
SYN3-210ENST00000468922 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
SYN3-210ENST00000468922 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
SYN3-210ENST00000468922 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
SYN3-210ENST00000468922 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYN3-210ENST00000468922 NACADO15069 1562 aa17.86■□□□□ 0.45
SYN3-210ENST00000468922 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
SYN3-210ENST00000468922 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
SYN3-210ENST00000468922 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
SYN3-210ENST00000468922 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
SYN3-210ENST00000468922 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
SYN3-210ENST00000468922 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
SYN3-210ENST00000468922 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
SYN3-210ENST00000468922 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
SYN3-210ENST00000468922 ZCCHC6Q5VYS8 1495 aaKnown RBP17.29■□□□□ 0.36
SYN3-210ENST00000468922 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
SYN3-210ENST00000468922 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
SYN3-210ENST00000468922 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
SYN3-210ENST00000468922 CUX2O14529 1486 aa16.86■□□□□ 0.29
SYN3-210ENST00000468922 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
SYN3-210ENST00000468922 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
SYN3-210ENST00000468922 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
SYN3-210ENST00000468922 NESP48681 1621 aa16.41■□□□□ 0.22
SYN3-210ENST00000468922 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
SYN3-210ENST00000468922 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
SYN3-210ENST00000468922 HMGXB3Q12766 1538 aa16.29■□□□□ 0.2
SYN3-210ENST00000468922 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
SYN3-210ENST00000468922 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
SYN3-210ENST00000468922 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
SYN3-210ENST00000468922 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
SYN3-210ENST00000468922 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
SYN3-210ENST00000468922 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
SYN3-210ENST00000468922 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
SYN3-210ENST00000468922 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
SYN3-210ENST00000468922 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
SYN3-210ENST00000468922 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
SYN3-210ENST00000468922 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.16
SYN3-210ENST00000468922 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
SYN3-210ENST00000468922 WDR62O43379 1518 aa15.99■□□□□ 0.15
SYN3-210ENST00000468922 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
SYN3-210ENST00000468922 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
SYN3-210ENST00000468922 WIZO95785 1651 aa15.8■□□□□ 0.12
SYN3-210ENST00000468922 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
SYN3-210ENST00000468922 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
SYN3-210ENST00000468922 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
SYN3-210ENST00000468922 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
SYN3-210ENST00000468922 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
SYN3-210ENST00000468922 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
SYN3-210ENST00000468922 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
SYN3-210ENST00000468922 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
SYN3-210ENST00000468922 CFTRP13569 1480 aa15.7■□□□□ 0.1
SYN3-210ENST00000468922 URB2Q14146 1524 aaKnown RBP15.68■□□□□ 0.1
SYN3-210ENST00000468922 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
SYN3-210ENST00000468922 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
SYN3-210ENST00000468922 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
SYN3-210ENST00000468922 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
SYN3-210ENST00000468922 FBLN2P98095 1184 aa15.51■□□□□ 0.07
SYN3-210ENST00000468922 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
SYN3-210ENST00000468922 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
SYN3-210ENST00000468922 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.06
SYN3-210ENST00000468922 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
SYN3-210ENST00000468922 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
SYN3-210ENST00000468922 CHD1O14646 1710 aa15.37■□□□□ 0.05
SYN3-210ENST00000468922 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
SYN3-210ENST00000468922 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
SYN3-210ENST00000468922 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
SYN3-210ENST00000468922 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
SYN3-210ENST00000468922 TDRD9Q8NDG6 1382 aaKnown RBP15.27■□□□□ 0.04
SYN3-210ENST00000468922 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
SYN3-210ENST00000468922 CLASP1Q7Z460 1538 aa15.24■□□□□ 0.03
SYN3-210ENST00000468922 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
SYN3-210ENST00000468922 SOGA1O94964 1423 aa15.24■□□□□ 0.03
SYN3-210ENST00000468922 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
SYN3-210ENST00000468922 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
SYN3-210ENST00000468922 SYNJ1O43426 1573 aa15.21■□□□□ 0.03
SYN3-210ENST00000468922 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
SYN3-210ENST00000468922 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
SYN3-210ENST00000468922 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
SYN3-210ENST00000468922 GRIN2BQ13224 1484 aa15.13■□□□□ 0.01
SYN3-210ENST00000468922 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
SYN3-210ENST00000468922 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
SYN3-210ENST00000468922 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
SYN3-210ENST00000468922 CUX1P39880 1505 aa15.02□□□□□ -0.01
SYN3-210ENST00000468922 ERCC6L2Q5T890 1561 aa14.97□□□□□ -0.01
SYN3-210ENST00000468922 KDM4FA0A1W2PPD8 638 aa14.95□□□□□ -0.02
SYN3-210ENST00000468922 FAM69CQ0P6D2 419 aa14.94□□□□□ -0.02
SYN3-210ENST00000468922 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
SYN3-210ENST00000468922 GRIN2AQ12879 1464 aa14.91□□□□□ -0.02
SYN3-210ENST00000468922 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
SYN3-210ENST00000468922 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
SYN3-210ENST00000468922 NUP160Q12769 1436 aa14.88□□□□□ -0.03
SYN3-210ENST00000468922 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
SYN3-210ENST00000468922 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
SYN3-210ENST00000468922 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
SYN3-210ENST00000468922 TOP2BQ02880 1626 aa14.86□□□□□ -0.03
SYN3-210ENST00000468922 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
SYN3-210ENST00000468922 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
SYN3-210ENST00000468922 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
SYN3-210ENST00000468922 JPH4Q96JJ6 628 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms