RNA–Protein interactions for RNA: ENST00000468880.1

KRT19-204, Transcript of keratin 19, humanhuman

TSL 2

Gene KRT19, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT19-204ENST00000468880 NISCHQ9Y2I1 1504 aa38.37■■■■□ 3.73
KRT19-204ENST00000468880 ABCC9O60706 1549 aa34.65■■■■□ 3.14
KRT19-204ENST00000468880 CCDC180Q9P1Z9 1646 aa34.47■■■■□ 3.11
KRT19-204ENST00000468880 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
KRT19-204ENST00000468880 NACADO15069 1562 aa32.65■■■□□ 2.82
KRT19-204ENST00000468880 DCAF8L2P0C7V8 631 aa32.56■■■□□ 2.8
KRT19-204ENST00000468880 DNAJC5BQ9UF47 199 aa32.5■■■□□ 2.79
KRT19-204ENST00000468880 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
KRT19-204ENST00000468880 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
KRT19-204ENST00000468880 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
KRT19-204ENST00000468880 BICRAQ9NZM4 1560 aa31.87■■■□□ 2.69
KRT19-204ENST00000468880 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
KRT19-204ENST00000468880 DCAF1Q9Y4B6 1507 aa31.66■■■□□ 2.66
KRT19-204ENST00000468880 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
KRT19-204ENST00000468880 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
KRT19-204ENST00000468880 CC2D2AQ9P2K1 1620 aa31.25■■■□□ 2.59
KRT19-204ENST00000468880 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
KRT19-204ENST00000468880 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
KRT19-204ENST00000468880 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
KRT19-204ENST00000468880 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
KRT19-204ENST00000468880 ERCC6Q03468 1493 aa30■■■□□ 2.39
KRT19-204ENST00000468880 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
KRT19-204ENST00000468880 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
KRT19-204ENST00000468880 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
KRT19-204ENST00000468880 CUX2O14529 1486 aa29.92■■■□□ 2.38
KRT19-204ENST00000468880 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
KRT19-204ENST00000468880 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
KRT19-204ENST00000468880 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
KRT19-204ENST00000468880 NESP48681 1621 aa29.69■■■□□ 2.34
KRT19-204ENST00000468880 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.33
KRT19-204ENST00000468880 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
KRT19-204ENST00000468880 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
KRT19-204ENST00000468880 THOC2Q8NI27 1593 aaKnown RBP29.41■■■□□ 2.3
KRT19-204ENST00000468880 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
KRT19-204ENST00000468880 KIF21AQ7Z4S6 1674 aa29.28■■■□□ 2.28
KRT19-204ENST00000468880 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
KRT19-204ENST00000468880 WIZO95785 1651 aa29.18■■■□□ 2.26
KRT19-204ENST00000468880 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
KRT19-204ENST00000468880 WDR62O43379 1518 aa29.01■■■□□ 2.23
KRT19-204ENST00000468880 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
KRT19-204ENST00000468880 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
KRT19-204ENST00000468880 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
KRT19-204ENST00000468880 CFTRP13569 1480 aa28.85■■■□□ 2.21
KRT19-204ENST00000468880 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
KRT19-204ENST00000468880 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
KRT19-204ENST00000468880 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.18
KRT19-204ENST00000468880 OSCARQ8IYS5 282 aa28.53■■■□□ 2.16
KRT19-204ENST00000468880 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
KRT19-204ENST00000468880 PRDM2Q13029 1718 aa28.5■■■□□ 2.15
KRT19-204ENST00000468880 IFT140Q96RY7 1462 aa28.39■■■□□ 2.13
KRT19-204ENST00000468880 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
KRT19-204ENST00000468880 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
KRT19-204ENST00000468880 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
KRT19-204ENST00000468880 DNMBPQ6XZF7 1577 aa28.23■■■□□ 2.11
KRT19-204ENST00000468880 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
KRT19-204ENST00000468880 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.09
KRT19-204ENST00000468880 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.09
KRT19-204ENST00000468880 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.09
KRT19-204ENST00000468880 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.08
KRT19-204ENST00000468880 ARHGEF11O15085 1522 aa28.07■■■□□ 2.08
KRT19-204ENST00000468880 TARBP1Q13395 1621 aaKnown RBP28.04■■■□□ 2.08
KRT19-204ENST00000468880 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
KRT19-204ENST00000468880 FBLN2P98095 1184 aa28■■■□□ 2.07
KRT19-204ENST00000468880 CHD1O14646 1710 aa27.95■■■□□ 2.06
KRT19-204ENST00000468880 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
KRT19-204ENST00000468880 SOGA1O94964 1423 aa27.93■■■□□ 2.06
KRT19-204ENST00000468880 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
KRT19-204ENST00000468880 CYB5RLQ6IPT4 315 aa27.89■■■□□ 2.06
KRT19-204ENST00000468880 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
KRT19-204ENST00000468880 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
KRT19-204ENST00000468880 WDR97A6NE52 1622 aa27.8■■■□□ 2.04
KRT19-204ENST00000468880 CUX1P39880 1505 aa27.79■■■□□ 2.04
KRT19-204ENST00000468880 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
KRT19-204ENST00000468880 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
KRT19-204ENST00000468880 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
KRT19-204ENST00000468880 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
KRT19-204ENST00000468880 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
KRT19-204ENST00000468880 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
KRT19-204ENST00000468880 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
KRT19-204ENST00000468880 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
KRT19-204ENST00000468880 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
KRT19-204ENST00000468880 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
KRT19-204ENST00000468880 PBRM1Q86U86 1689 aa27.54■■■□□ 2
KRT19-204ENST00000468880 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
KRT19-204ENST00000468880 ABCA5Q8WWZ7 1642 aa27.48■■□□□ 1.99
KRT19-204ENST00000468880 WRNQ14191 1432 aaPredicted RBP eCLIP27.43■■□□□ 1.98
KRT19-204ENST00000468880 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
KRT19-204ENST00000468880 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
KRT19-204ENST00000468880 TOP2BQ02880 1626 aa27.31■■□□□ 1.96
KRT19-204ENST00000468880 BIVM-ERCC5R4GMW8 1640 aa27.29■■□□□ 1.96
KRT19-204ENST00000468880 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
KRT19-204ENST00000468880 NUP160Q12769 1436 aa27.23■■□□□ 1.95
KRT19-204ENST00000468880 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
KRT19-204ENST00000468880 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
KRT19-204ENST00000468880 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
KRT19-204ENST00000468880 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
KRT19-204ENST00000468880 PRG4Q92954 1404 aaPredicted RBP27.02■■□□□ 1.92
KRT19-204ENST00000468880 AEBP2Q6ZN18 517 aaPredicted RBP26.99■■□□□ 1.91
KRT19-204ENST00000468880 JPH4Q96JJ6 628 aa26.97■■□□□ 1.91
KRT19-204ENST00000468880 RUSC2Q8N2Y8 1516 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms