RNA–Protein interactions for RNA: ENST00000468841.3

RN7SL111P-201, Transcript of RNA, 7SL, cytoplasmic 111, pseudogene, humanhuman

BASIC

Gene RN7SL111P, Length 285 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL111P-201ENST00000468841 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
RN7SL111P-201ENST00000468841 ABCC9O60706 1549 aa27.24■■□□□ 1.95
RN7SL111P-201ENST00000468841 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
RN7SL111P-201ENST00000468841 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
RN7SL111P-201ENST00000468841 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
RN7SL111P-201ENST00000468841 NACADO15069 1562 aa25.69■■□□□ 1.7
RN7SL111P-201ENST00000468841 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
RN7SL111P-201ENST00000468841 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
RN7SL111P-201ENST00000468841 MYO15BQ96JP2 1530 aa25.36■■□□□ 1.65
RN7SL111P-201ENST00000468841 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
RN7SL111P-201ENST00000468841 UNC13AQ9UPW8 1703 aa25.13■■□□□ 1.61
RN7SL111P-201ENST00000468841 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
RN7SL111P-201ENST00000468841 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
RN7SL111P-201ENST00000468841 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
RN7SL111P-201ENST00000468841 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
RN7SL111P-201ENST00000468841 CC2D2AQ9P2K1 1620 aa24.51■■□□□ 1.51
RN7SL111P-201ENST00000468841 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
RN7SL111P-201ENST00000468841 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
RN7SL111P-201ENST00000468841 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
RN7SL111P-201ENST00000468841 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
RN7SL111P-201ENST00000468841 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
RN7SL111P-201ENST00000468841 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
RN7SL111P-201ENST00000468841 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
RN7SL111P-201ENST00000468841 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
RN7SL111P-201ENST00000468841 BAZ1BQ9UIG0 1483 aaKnown RBP23.51■■□□□ 1.35
RN7SL111P-201ENST00000468841 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
RN7SL111P-201ENST00000468841 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
RN7SL111P-201ENST00000468841 NESP48681 1621 aa23.44■■□□□ 1.34
RN7SL111P-201ENST00000468841 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
RN7SL111P-201ENST00000468841 CUX2O14529 1486 aa23.33■■□□□ 1.33
RN7SL111P-201ENST00000468841 DNAJC5Q9H3Z4 198 aa23.32■■□□□ 1.32
RN7SL111P-201ENST00000468841 WIZO95785 1651 aa23.17■■□□□ 1.3
RN7SL111P-201ENST00000468841 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.3
RN7SL111P-201ENST00000468841 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
RN7SL111P-201ENST00000468841 PDS5BQ9NTI5 1447 aa23.11■■□□□ 1.29
RN7SL111P-201ENST00000468841 RSF1Q96T23 1441 aaPredicted RBP23.1■■□□□ 1.29
RN7SL111P-201ENST00000468841 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
RN7SL111P-201ENST00000468841 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
RN7SL111P-201ENST00000468841 MRC2Q9UBG0 1479 aa22.88■■□□□ 1.25
RN7SL111P-201ENST00000468841 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
RN7SL111P-201ENST00000468841 CFTRP13569 1480 aa22.85■■□□□ 1.25
RN7SL111P-201ENST00000468841 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
RN7SL111P-201ENST00000468841 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
RN7SL111P-201ENST00000468841 WDR62O43379 1518 aa22.77■■□□□ 1.24
RN7SL111P-201ENST00000468841 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
RN7SL111P-201ENST00000468841 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
RN7SL111P-201ENST00000468841 OSCARQ8IYS5 282 aa22.43■■□□□ 1.18
RN7SL111P-201ENST00000468841 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
RN7SL111P-201ENST00000468841 TOPBP1Q92547 1522 aa22.4■■□□□ 1.18
RN7SL111P-201ENST00000468841 ZNF608Q9ULD9 1512 aaPredicted RBP22.37■■□□□ 1.17
RN7SL111P-201ENST00000468841 IFT140Q96RY7 1462 aa22.36■■□□□ 1.17
RN7SL111P-201ENST00000468841 PRDM2Q13029 1718 aa22.35■■□□□ 1.17
RN7SL111P-201ENST00000468841 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
RN7SL111P-201ENST00000468841 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
RN7SL111P-201ENST00000468841 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
RN7SL111P-201ENST00000468841 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
RN7SL111P-201ENST00000468841 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
RN7SL111P-201ENST00000468841 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
RN7SL111P-201ENST00000468841 SOGA1O94964 1423 aa22.14■■□□□ 1.14
RN7SL111P-201ENST00000468841 FBLN2P98095 1184 aa22.13■■□□□ 1.13
RN7SL111P-201ENST00000468841 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
RN7SL111P-201ENST00000468841 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
RN7SL111P-201ENST00000468841 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
RN7SL111P-201ENST00000468841 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
RN7SL111P-201ENST00000468841 CUX1P39880 1505 aa22.06■■□□□ 1.12
RN7SL111P-201ENST00000468841 RIMBP3CA6NJZ7 1639 aa21.97■■□□□ 1.11
RN7SL111P-201ENST00000468841 RIMBP3BA6NNM3 1639 aa21.97■■□□□ 1.11
RN7SL111P-201ENST00000468841 RIMBP3Q9UFD9 1639 aa21.97■■□□□ 1.11
RN7SL111P-201ENST00000468841 ARHGEF11O15085 1522 aa21.96■■□□□ 1.11
RN7SL111P-201ENST00000468841 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
RN7SL111P-201ENST00000468841 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
RN7SL111P-201ENST00000468841 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
RN7SL111P-201ENST00000468841 CHD1O14646 1710 aa21.89■■□□□ 1.09
RN7SL111P-201ENST00000468841 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
RN7SL111P-201ENST00000468841 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
RN7SL111P-201ENST00000468841 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.08
RN7SL111P-201ENST00000468841 WDR97A6NE52 1622 aa21.81■■□□□ 1.08
RN7SL111P-201ENST00000468841 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
RN7SL111P-201ENST00000468841 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
RN7SL111P-201ENST00000468841 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
RN7SL111P-201ENST00000468841 ARAP1Q96P48 1450 aa21.77■■□□□ 1.08
RN7SL111P-201ENST00000468841 CLASP1Q7Z460 1538 aa21.71■■□□□ 1.07
RN7SL111P-201ENST00000468841 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
RN7SL111P-201ENST00000468841 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
RN7SL111P-201ENST00000468841 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
RN7SL111P-201ENST00000468841 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
RN7SL111P-201ENST00000468841 PBRM1Q86U86 1689 aa21.64■■□□□ 1.05
RN7SL111P-201ENST00000468841 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
RN7SL111P-201ENST00000468841 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
RN7SL111P-201ENST00000468841 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
RN7SL111P-201ENST00000468841 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
RN7SL111P-201ENST00000468841 NUP160Q12769 1436 aa21.52■■□□□ 1.04
RN7SL111P-201ENST00000468841 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
RN7SL111P-201ENST00000468841 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
RN7SL111P-201ENST00000468841 ERCC6L2Q5T890 1561 aa21.46■■□□□ 1.03
RN7SL111P-201ENST00000468841 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
RN7SL111P-201ENST00000468841 IGF1RP08069 1367 aa21.39■■□□□ 1.02
RN7SL111P-201ENST00000468841 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
RN7SL111P-201ENST00000468841 KIF27Q86VH2 1401 aa21.34■■□□□ 1.01
RN7SL111P-201ENST00000468841 SHROOM2Q13796 1616 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms