RNA–Protein interactions for RNA: ENST00000468760.1

RABGAP1-207, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene RABGAP1, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-207ENST00000468760 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
RABGAP1-207ENST00000468760 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
RABGAP1-207ENST00000468760 ABCC9O60706 1549 aa24.5■■□□□ 1.51
RABGAP1-207ENST00000468760 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
RABGAP1-207ENST00000468760 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
RABGAP1-207ENST00000468760 NACADO15069 1562 aa23.27■■□□□ 1.32
RABGAP1-207ENST00000468760 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
RABGAP1-207ENST00000468760 MYO15BQ96JP2 1530 aa22.97■■□□□ 1.27
RABGAP1-207ENST00000468760 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
RABGAP1-207ENST00000468760 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
RABGAP1-207ENST00000468760 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
RABGAP1-207ENST00000468760 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
RABGAP1-207ENST00000468760 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
RABGAP1-207ENST00000468760 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
RABGAP1-207ENST00000468760 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
RABGAP1-207ENST00000468760 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
RABGAP1-207ENST00000468760 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
RABGAP1-207ENST00000468760 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
RABGAP1-207ENST00000468760 SMARCA4P51532 1647 aa21.54■■□□□ 1.04
RABGAP1-207ENST00000468760 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
RABGAP1-207ENST00000468760 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
RABGAP1-207ENST00000468760 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
RABGAP1-207ENST00000468760 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
RABGAP1-207ENST00000468760 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
RABGAP1-207ENST00000468760 HMGXB3Q12766 1538 aa21.33■■□□□ 1
RABGAP1-207ENST00000468760 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
RABGAP1-207ENST00000468760 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
RABGAP1-207ENST00000468760 WIZO95785 1651 aa21.15■□□□□ 0.98
RABGAP1-207ENST00000468760 NESP48681 1621 aa21.14■□□□□ 0.97
RABGAP1-207ENST00000468760 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
RABGAP1-207ENST00000468760 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
RABGAP1-207ENST00000468760 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
RABGAP1-207ENST00000468760 CUX2O14529 1486 aa20.92■□□□□ 0.94
RABGAP1-207ENST00000468760 KIF21AQ7Z4S6 1674 aa20.9■□□□□ 0.94
RABGAP1-207ENST00000468760 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
RABGAP1-207ENST00000468760 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
RABGAP1-207ENST00000468760 THOC2Q8NI27 1593 aaKnown RBP20.82■□□□□ 0.92
RABGAP1-207ENST00000468760 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
RABGAP1-207ENST00000468760 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
RABGAP1-207ENST00000468760 CFTRP13569 1480 aa20.65■□□□□ 0.9
RABGAP1-207ENST00000468760 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
RABGAP1-207ENST00000468760 MRC2Q9UBG0 1479 aa20.62■□□□□ 0.89
RABGAP1-207ENST00000468760 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
RABGAP1-207ENST00000468760 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
RABGAP1-207ENST00000468760 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
RABGAP1-207ENST00000468760 WDR62O43379 1518 aa20.56■□□□□ 0.88
RABGAP1-207ENST00000468760 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
RABGAP1-207ENST00000468760 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
RABGAP1-207ENST00000468760 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
RABGAP1-207ENST00000468760 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
RABGAP1-207ENST00000468760 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
RABGAP1-207ENST00000468760 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
RABGAP1-207ENST00000468760 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
RABGAP1-207ENST00000468760 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
RABGAP1-207ENST00000468760 OSCARQ8IYS5 282 aa20.08■□□□□ 0.81
RABGAP1-207ENST00000468760 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
RABGAP1-207ENST00000468760 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
RABGAP1-207ENST00000468760 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.8
RABGAP1-207ENST00000468760 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
RABGAP1-207ENST00000468760 CUX1P39880 1505 aa20.03■□□□□ 0.8
RABGAP1-207ENST00000468760 SOGA1O94964 1423 aa20.01■□□□□ 0.79
RABGAP1-207ENST00000468760 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
RABGAP1-207ENST00000468760 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.79
RABGAP1-207ENST00000468760 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
RABGAP1-207ENST00000468760 CHD1O14646 1710 aa19.93■□□□□ 0.78
RABGAP1-207ENST00000468760 FBLN2P98095 1184 aa19.89■□□□□ 0.77
RABGAP1-207ENST00000468760 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
RABGAP1-207ENST00000468760 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
RABGAP1-207ENST00000468760 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
RABGAP1-207ENST00000468760 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
RABGAP1-207ENST00000468760 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
RABGAP1-207ENST00000468760 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
RABGAP1-207ENST00000468760 BIVM-ERCC5R4GMW8 1640 aa19.79■□□□□ 0.76
RABGAP1-207ENST00000468760 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
RABGAP1-207ENST00000468760 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
RABGAP1-207ENST00000468760 TOP2BQ02880 1626 aa19.77■□□□□ 0.76
RABGAP1-207ENST00000468760 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
RABGAP1-207ENST00000468760 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
RABGAP1-207ENST00000468760 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
RABGAP1-207ENST00000468760 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
RABGAP1-207ENST00000468760 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
RABGAP1-207ENST00000468760 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
RABGAP1-207ENST00000468760 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
RABGAP1-207ENST00000468760 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
RABGAP1-207ENST00000468760 CYB5RLQ6IPT4 315 aa19.63■□□□□ 0.73
RABGAP1-207ENST00000468760 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
RABGAP1-207ENST00000468760 ARAP1Q96P48 1450 aa19.55■□□□□ 0.72
RABGAP1-207ENST00000468760 ADAMTS12P58397 1594 aa19.54■□□□□ 0.72
RABGAP1-207ENST00000468760 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
RABGAP1-207ENST00000468760 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
RABGAP1-207ENST00000468760 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
RABGAP1-207ENST00000468760 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
RABGAP1-207ENST00000468760 NUP160Q12769 1436 aa19.42■□□□□ 0.7
RABGAP1-207ENST00000468760 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
RABGAP1-207ENST00000468760 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
RABGAP1-207ENST00000468760 IGF1RP08069 1367 aa19.36■□□□□ 0.69
RABGAP1-207ENST00000468760 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
RABGAP1-207ENST00000468760 SHROOM2Q13796 1616 aa19.33■□□□□ 0.69
RABGAP1-207ENST00000468760 CUL7Q14999 1698 aa19.3■□□□□ 0.68
RABGAP1-207ENST00000468760 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms