RNA–Protein interactions for RNA: ENST00000468727.5

ARHGEF3-206, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-206ENST00000468727 NISCHQ9Y2I1 1504 aa32.05■■■□□ 2.72
ARHGEF3-206ENST00000468727 ABCC9O60706 1549 aa29.17■■■□□ 2.26
ARHGEF3-206ENST00000468727 CCDC180Q9P1Z9 1646 aa28.97■■■□□ 2.23
ARHGEF3-206ENST00000468727 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
ARHGEF3-206ENST00000468727 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
ARHGEF3-206ENST00000468727 NACADO15069 1562 aa27.34■■□□□ 1.97
ARHGEF3-206ENST00000468727 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
ARHGEF3-206ENST00000468727 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
ARHGEF3-206ENST00000468727 DCAF8L2P0C7V8 631 aa27.03■■□□□ 1.92
ARHGEF3-206ENST00000468727 BICRAQ9NZM4 1560 aa26.94■■□□□ 1.9
ARHGEF3-206ENST00000468727 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
ARHGEF3-206ENST00000468727 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
ARHGEF3-206ENST00000468727 DCAF1Q9Y4B6 1507 aa26.42■■□□□ 1.82
ARHGEF3-206ENST00000468727 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
ARHGEF3-206ENST00000468727 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
ARHGEF3-206ENST00000468727 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
ARHGEF3-206ENST00000468727 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
ARHGEF3-206ENST00000468727 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
ARHGEF3-206ENST00000468727 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
ARHGEF3-206ENST00000468727 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
ARHGEF3-206ENST00000468727 CUX2O14529 1486 aa25.17■■□□□ 1.62
ARHGEF3-206ENST00000468727 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
ARHGEF3-206ENST00000468727 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.61
ARHGEF3-206ENST00000468727 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
ARHGEF3-206ENST00000468727 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
ARHGEF3-206ENST00000468727 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
ARHGEF3-206ENST00000468727 NESP48681 1621 aa25.03■■□□□ 1.6
ARHGEF3-206ENST00000468727 THOC2Q8NI27 1593 aaKnown RBP24.88■■□□□ 1.57
ARHGEF3-206ENST00000468727 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
ARHGEF3-206ENST00000468727 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
ARHGEF3-206ENST00000468727 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
ARHGEF3-206ENST00000468727 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
ARHGEF3-206ENST00000468727 MROH2BQ7Z745 1585 aa24.75■■□□□ 1.55
ARHGEF3-206ENST00000468727 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
ARHGEF3-206ENST00000468727 WIZO95785 1651 aa24.52■■□□□ 1.52
ARHGEF3-206ENST00000468727 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
ARHGEF3-206ENST00000468727 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
ARHGEF3-206ENST00000468727 WDR62O43379 1518 aa24.4■■□□□ 1.5
ARHGEF3-206ENST00000468727 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
ARHGEF3-206ENST00000468727 CEP164Q9UPV0 1460 aa24.24■■□□□ 1.47
ARHGEF3-206ENST00000468727 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
ARHGEF3-206ENST00000468727 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
ARHGEF3-206ENST00000468727 CFTRP13569 1480 aa24.12■■□□□ 1.45
ARHGEF3-206ENST00000468727 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
ARHGEF3-206ENST00000468727 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
ARHGEF3-206ENST00000468727 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
ARHGEF3-206ENST00000468727 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
ARHGEF3-206ENST00000468727 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
ARHGEF3-206ENST00000468727 RIMBP3CA6NJZ7 1639 aa23.84■■□□□ 1.41
ARHGEF3-206ENST00000468727 RIMBP3BA6NNM3 1639 aa23.84■■□□□ 1.41
ARHGEF3-206ENST00000468727 RIMBP3Q9UFD9 1639 aa23.84■■□□□ 1.41
ARHGEF3-206ENST00000468727 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
ARHGEF3-206ENST00000468727 CCDC88BA6NC98 1476 aa23.78■■□□□ 1.4
ARHGEF3-206ENST00000468727 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
ARHGEF3-206ENST00000468727 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
ARHGEF3-206ENST00000468727 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
ARHGEF3-206ENST00000468727 CHD1O14646 1710 aa23.7■■□□□ 1.38
ARHGEF3-206ENST00000468727 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
ARHGEF3-206ENST00000468727 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
ARHGEF3-206ENST00000468727 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
ARHGEF3-206ENST00000468727 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
ARHGEF3-206ENST00000468727 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.35
ARHGEF3-206ENST00000468727 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF3-206ENST00000468727 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
ARHGEF3-206ENST00000468727 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
ARHGEF3-206ENST00000468727 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
ARHGEF3-206ENST00000468727 FBLN2P98095 1184 aa23.31■■□□□ 1.32
ARHGEF3-206ENST00000468727 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
ARHGEF3-206ENST00000468727 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
ARHGEF3-206ENST00000468727 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
ARHGEF3-206ENST00000468727 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
ARHGEF3-206ENST00000468727 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
ARHGEF3-206ENST00000468727 SOGA1O94964 1423 aa23.27■■□□□ 1.32
ARHGEF3-206ENST00000468727 CUX1P39880 1505 aa23.27■■□□□ 1.32
ARHGEF3-206ENST00000468727 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
ARHGEF3-206ENST00000468727 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
ARHGEF3-206ENST00000468727 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
ARHGEF3-206ENST00000468727 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF3-206ENST00000468727 GRIN2BQ13224 1484 aa23.12■■□□□ 1.29
ARHGEF3-206ENST00000468727 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
ARHGEF3-206ENST00000468727 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
ARHGEF3-206ENST00000468727 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
ARHGEF3-206ENST00000468727 GAPVD1Q14C86 1478 aa23.03■■□□□ 1.28
ARHGEF3-206ENST00000468727 ABCA10Q8WWZ4 1543 aa22.98■■□□□ 1.27
ARHGEF3-206ENST00000468727 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
ARHGEF3-206ENST00000468727 ADAMTS12P58397 1594 aa22.92■■□□□ 1.26
ARHGEF3-206ENST00000468727 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
ARHGEF3-206ENST00000468727 GRIN2AQ12879 1464 aa22.87■■□□□ 1.25
ARHGEF3-206ENST00000468727 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
ARHGEF3-206ENST00000468727 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
ARHGEF3-206ENST00000468727 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
ARHGEF3-206ENST00000468727 NUP160Q12769 1436 aa22.79■■□□□ 1.24
ARHGEF3-206ENST00000468727 KIF13AQ9H1H9 1805 aa22.78■■□□□ 1.24
ARHGEF3-206ENST00000468727 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
ARHGEF3-206ENST00000468727 SUPT5HO00267 1087 aaKnown RBP22.73■■□□□ 1.23
ARHGEF3-206ENST00000468727 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
ARHGEF3-206ENST00000468727 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
ARHGEF3-206ENST00000468727 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF3-206ENST00000468727 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
ARHGEF3-206ENST00000468727 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms