RNA–Protein interactions for RNA: ENST00000468626.2

LYST-207, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 1,140 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-207ENST00000468626 NISCHQ9Y2I1 1504 aa30.08■■■□□ 2.41
LYST-207ENST00000468626 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
LYST-207ENST00000468626 CCDC180Q9P1Z9 1646 aa26.56■■□□□ 1.84
LYST-207ENST00000468626 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
LYST-207ENST00000468626 ABCC9O60706 1549 aa25.41■■□□□ 1.66
LYST-207ENST00000468626 ZCCHC6Q5VYS8 1495 aaKnown RBP25.17■■□□□ 1.62
LYST-207ENST00000468626 DCAF8L2P0C7V8 631 aa24.93■■□□□ 1.58
LYST-207ENST00000468626 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
LYST-207ENST00000468626 NACADO15069 1562 aa24.79■■□□□ 1.56
LYST-207ENST00000468626 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
LYST-207ENST00000468626 RB1CC1Q8TDY2 1594 aa24.7■■□□□ 1.54
LYST-207ENST00000468626 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
LYST-207ENST00000468626 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
LYST-207ENST00000468626 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
LYST-207ENST00000468626 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
LYST-207ENST00000468626 PABPN1Q86U42 306 aaKnown RBP eCLIP23.82■■□□□ 1.4
LYST-207ENST00000468626 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
LYST-207ENST00000468626 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
LYST-207ENST00000468626 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
LYST-207ENST00000468626 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
LYST-207ENST00000468626 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
LYST-207ENST00000468626 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
LYST-207ENST00000468626 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
LYST-207ENST00000468626 WIZO95785 1651 aa23.03■■□□□ 1.28
LYST-207ENST00000468626 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
LYST-207ENST00000468626 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
LYST-207ENST00000468626 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
LYST-207ENST00000468626 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
LYST-207ENST00000468626 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
LYST-207ENST00000468626 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
LYST-207ENST00000468626 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
LYST-207ENST00000468626 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
LYST-207ENST00000468626 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
LYST-207ENST00000468626 DNAJC5BQ9UF47 199 aa22.76■■□□□ 1.23
LYST-207ENST00000468626 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
LYST-207ENST00000468626 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
LYST-207ENST00000468626 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
LYST-207ENST00000468626 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
LYST-207ENST00000468626 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
LYST-207ENST00000468626 CFTRP13569 1480 aa22.19■■□□□ 1.14
LYST-207ENST00000468626 NESP48681 1621 aa22.15■■□□□ 1.14
LYST-207ENST00000468626 PDS5BQ9NTI5 1447 aa21.99■■□□□ 1.11
LYST-207ENST00000468626 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
LYST-207ENST00000468626 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
LYST-207ENST00000468626 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
LYST-207ENST00000468626 ABCC8Q09428 1581 aa21.88■■□□□ 1.09
LYST-207ENST00000468626 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
LYST-207ENST00000468626 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
LYST-207ENST00000468626 MRC2Q9UBG0 1479 aa21.75■■□□□ 1.07
LYST-207ENST00000468626 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
LYST-207ENST00000468626 CUX1P39880 1505 aa21.74■■□□□ 1.07
LYST-207ENST00000468626 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
LYST-207ENST00000468626 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
LYST-207ENST00000468626 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
LYST-207ENST00000468626 TOP2BQ02880 1626 aa21.72■■□□□ 1.07
LYST-207ENST00000468626 URB2Q14146 1524 aaKnown RBP21.71■■□□□ 1.07
LYST-207ENST00000468626 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
LYST-207ENST00000468626 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
LYST-207ENST00000468626 WDR62O43379 1518 aa21.66■■□□□ 1.06
LYST-207ENST00000468626 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
LYST-207ENST00000468626 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
LYST-207ENST00000468626 FOXD1Q16676 465 aa21.46■■□□□ 1.03
LYST-207ENST00000468626 SOGA1O94964 1423 aa21.45■■□□□ 1.02
LYST-207ENST00000468626 RAD54L2Q9Y4B4 1467 aa21.45■■□□□ 1.02
LYST-207ENST00000468626 CUX2O14529 1486 aa21.44■■□□□ 1.02
LYST-207ENST00000468626 WDR97A6NE52 1622 aa21.43■■□□□ 1.02
LYST-207ENST00000468626 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
LYST-207ENST00000468626 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
LYST-207ENST00000468626 ABCA10Q8WWZ4 1543 aa21.38■■□□□ 1.01
LYST-207ENST00000468626 KIF27Q86VH2 1401 aa21.29■■□□□ 1
LYST-207ENST00000468626 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
LYST-207ENST00000468626 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
LYST-207ENST00000468626 ZNF608Q9ULD9 1512 aaPredicted RBP21.26■□□□□ 0.99
LYST-207ENST00000468626 EEA1Q15075 1411 aa21.26■□□□□ 0.99
LYST-207ENST00000468626 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
LYST-207ENST00000468626 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
LYST-207ENST00000468626 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
LYST-207ENST00000468626 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
LYST-207ENST00000468626 GAPVD1Q14C86 1478 aa21.23■□□□□ 0.99
LYST-207ENST00000468626 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.99
LYST-207ENST00000468626 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.98
LYST-207ENST00000468626 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
LYST-207ENST00000468626 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
LYST-207ENST00000468626 CUL7Q14999 1698 aa21.11■□□□□ 0.97
LYST-207ENST00000468626 IGF1RP08069 1367 aa21.1■□□□□ 0.97
LYST-207ENST00000468626 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
LYST-207ENST00000468626 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
LYST-207ENST00000468626 KIF21BO75037 1637 aa21.04■□□□□ 0.96
LYST-207ENST00000468626 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
LYST-207ENST00000468626 CARMIL1Q5VZK9 1371 aa21.02■□□□□ 0.96
LYST-207ENST00000468626 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
LYST-207ENST00000468626 FHAD1B1AJZ9 1412 aa20.98■□□□□ 0.95
LYST-207ENST00000468626 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
LYST-207ENST00000468626 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
LYST-207ENST00000468626 CHD1O14646 1710 aa20.93■□□□□ 0.94
LYST-207ENST00000468626 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
LYST-207ENST00000468626 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
LYST-207ENST00000468626 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
LYST-207ENST00000468626 CHMP7Q8WUX9 453 aaPredicted RBP20.88■□□□□ 0.93
LYST-207ENST00000468626 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms