RNA–Protein interactions for RNA: ENST00000468606.5

NMD3-205, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 5

Gene NMD3, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-205ENST00000468606 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
NMD3-205ENST00000468606 ABCC9O60706 1549 aa28.23■■■□□ 2.11
NMD3-205ENST00000468606 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
NMD3-205ENST00000468606 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
NMD3-205ENST00000468606 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
NMD3-205ENST00000468606 NACADO15069 1562 aa26.58■■□□□ 1.85
NMD3-205ENST00000468606 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
NMD3-205ENST00000468606 PABPN1Q86U42 306 aaKnown RBP eCLIP26.29■■□□□ 1.8
NMD3-205ENST00000468606 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
NMD3-205ENST00000468606 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
NMD3-205ENST00000468606 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
NMD3-205ENST00000468606 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
NMD3-205ENST00000468606 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
NMD3-205ENST00000468606 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
NMD3-205ENST00000468606 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
NMD3-205ENST00000468606 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
NMD3-205ENST00000468606 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
NMD3-205ENST00000468606 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
NMD3-205ENST00000468606 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
NMD3-205ENST00000468606 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
NMD3-205ENST00000468606 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
NMD3-205ENST00000468606 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
NMD3-205ENST00000468606 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
NMD3-205ENST00000468606 CUX2O14529 1486 aa24.38■■□□□ 1.49
NMD3-205ENST00000468606 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
NMD3-205ENST00000468606 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
NMD3-205ENST00000468606 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
NMD3-205ENST00000468606 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
NMD3-205ENST00000468606 NESP48681 1621 aa24.21■■□□□ 1.47
NMD3-205ENST00000468606 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
NMD3-205ENST00000468606 MROH2BQ7Z745 1585 aa24.06■■□□□ 1.44
NMD3-205ENST00000468606 LAMC3Q9Y6N6 1575 aa24■■□□□ 1.43
NMD3-205ENST00000468606 THOC2Q8NI27 1593 aaKnown RBP23.96■■□□□ 1.43
NMD3-205ENST00000468606 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
NMD3-205ENST00000468606 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
NMD3-205ENST00000468606 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
NMD3-205ENST00000468606 WIZO95785 1651 aa23.76■■□□□ 1.39
NMD3-205ENST00000468606 MRC2Q9UBG0 1479 aa23.69■■□□□ 1.38
NMD3-205ENST00000468606 WDR62O43379 1518 aa23.62■■□□□ 1.37
NMD3-205ENST00000468606 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
NMD3-205ENST00000468606 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
NMD3-205ENST00000468606 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
NMD3-205ENST00000468606 CFTRP13569 1480 aa23.49■■□□□ 1.35
NMD3-205ENST00000468606 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
NMD3-205ENST00000468606 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
NMD3-205ENST00000468606 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
NMD3-205ENST00000468606 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
NMD3-205ENST00000468606 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
NMD3-205ENST00000468606 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
NMD3-205ENST00000468606 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
NMD3-205ENST00000468606 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
NMD3-205ENST00000468606 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
NMD3-205ENST00000468606 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
NMD3-205ENST00000468606 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
NMD3-205ENST00000468606 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
NMD3-205ENST00000468606 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
NMD3-205ENST00000468606 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
NMD3-205ENST00000468606 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
NMD3-205ENST00000468606 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
NMD3-205ENST00000468606 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.255e-8■■■□□ 17.4
NMD3-205ENST00000468606 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
NMD3-205ENST00000468606 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
NMD3-205ENST00000468606 CHD1O14646 1710 aa22.78■■□□□ 1.24
NMD3-205ENST00000468606 FBLN2P98095 1184 aa22.78■■□□□ 1.24
NMD3-205ENST00000468606 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
NMD3-205ENST00000468606 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
NMD3-205ENST00000468606 SOGA1O94964 1423 aa22.74■■□□□ 1.23
NMD3-205ENST00000468606 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
NMD3-205ENST00000468606 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
NMD3-205ENST00000468606 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
NMD3-205ENST00000468606 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
NMD3-205ENST00000468606 CUX1P39880 1505 aa22.62■■□□□ 1.21
NMD3-205ENST00000468606 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
NMD3-205ENST00000468606 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
NMD3-205ENST00000468606 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
NMD3-205ENST00000468606 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
NMD3-205ENST00000468606 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
NMD3-205ENST00000468606 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
NMD3-205ENST00000468606 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.19
NMD3-205ENST00000468606 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
NMD3-205ENST00000468606 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
NMD3-205ENST00000468606 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
NMD3-205ENST00000468606 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
NMD3-205ENST00000468606 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
NMD3-205ENST00000468606 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
NMD3-205ENST00000468606 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
NMD3-205ENST00000468606 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
NMD3-205ENST00000468606 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
NMD3-205ENST00000468606 TOP2BQ02880 1626 aa22.2■■□□□ 1.15
NMD3-205ENST00000468606 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
NMD3-205ENST00000468606 NUP160Q12769 1436 aa22.18■■□□□ 1.14
NMD3-205ENST00000468606 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
NMD3-205ENST00000468606 ERCC6L2Q5T890 1561 aa22.16■■□□□ 1.14
NMD3-205ENST00000468606 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
NMD3-205ENST00000468606 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
NMD3-205ENST00000468606 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
NMD3-205ENST00000468606 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
NMD3-205ENST00000468606 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
NMD3-205ENST00000468606 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
NMD3-205ENST00000468606 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 829.1 ms