RNA–Protein interactions for RNA: ENST00000468589.5

DENND1B-207, Transcript of DENN domain containing 1B, humanhuman

TSL 1 (best)

Gene DENND1B, Length 2,141 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-207ENST00000468589 NISCHQ9Y2I1 1504 aa55■■■■■ 6.4
DENND1B-207ENST00000468589 CCDC180Q9P1Z9 1646 aa47.49■■■■■ 5.19
DENND1B-207ENST00000468589 ZCCHC6Q5VYS8 1495 aaKnown RBP46.27■■■■■ 5
DENND1B-207ENST00000468589 DCAF8L2P0C7V8 631 aa45.75■■■■■ 4.91
DENND1B-207ENST00000468589 SHROOM4Q9ULL8 1493 aa45.7■■■■■ 4.91
DENND1B-207ENST00000468589 DCAF1Q9Y4B6 1507 aa45.23■■■■■ 4.83
DENND1B-207ENST00000468589 ABCC9O60706 1549 aa44.93■■■■■ 4.78
DENND1B-207ENST00000468589 MYO15BQ96JP2 1530 aa44.45■■■■■ 4.71
DENND1B-207ENST00000468589 SUPT5HO00267 1087 aaKnown RBP44.2■■■■■ 4.67
DENND1B-207ENST00000468589 NACADO15069 1562 aa44.18■■■■■ 4.66
DENND1B-207ENST00000468589 SCRIBQ14160 1630 aa44.13■■■■■ 4.65
DENND1B-207ENST00000468589 RB1CC1Q8TDY2 1594 aa43.73■■■■■ 4.59
DENND1B-207ENST00000468589 UNC13AQ9UPW8 1703 aa43.03■■■■■ 4.48
DENND1B-207ENST00000468589 RSF1Q96T23 1441 aaPredicted RBP42.97■■■■■ 4.47
DENND1B-207ENST00000468589 CECR2Q9BXF3 1484 aa42.93■■■■■ 4.46
DENND1B-207ENST00000468589 MROH2BQ7Z745 1585 aa42.66■■■■■ 4.42
DENND1B-207ENST00000468589 PABPN1Q86U42 306 aaKnown RBP eCLIP42.64■■■■■ 4.42
DENND1B-207ENST00000468589 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
DENND1B-207ENST00000468589 CHIC1Q5VXU3 224 aa42.43■■■■■ 4.38
DENND1B-207ENST00000468589 WIZO95785 1651 aa42.36■■■■■ 4.37
DENND1B-207ENST00000468589 BAZ1AQ9NRL2 1556 aaPredicted RBP42.35■■■■■ 4.37
DENND1B-207ENST00000468589 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
DENND1B-207ENST00000468589 TOP2AP11388 1531 aaKnown RBP41.73■■■■■ 4.27
DENND1B-207ENST00000468589 PEG3Q9GZU2 1588 aa41.48■■■■■ 4.23
DENND1B-207ENST00000468589 CCDC88BA6NC98 1476 aa41.48■■■■■ 4.23
DENND1B-207ENST00000468589 SMARCA2P51531 1590 aa41.44■■■■■ 4.22
DENND1B-207ENST00000468589 ATAD2BQ9ULI0 1458 aa41.39■■■■■ 4.22
DENND1B-207ENST00000468589 TRIM41Q8WV44 630 aa41.34■■■■■ 4.21
DENND1B-207ENST00000468589 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
DENND1B-207ENST00000468589 BAZ1BQ9UIG0 1483 aaKnown RBP41.19■■■■■ 4.18
DENND1B-207ENST00000468589 LOC105371045A0A1W2PR82 267 aa41.05■■■■■ 4.16
DENND1B-207ENST00000468589 ABCC8Q09428 1581 aa40.88■■■■■ 4.14
DENND1B-207ENST00000468589 FAM9AQ8IZU1 332 aaPredicted RBP40.86■■■■■ 4.13
DENND1B-207ENST00000468589 NCAPD3P42695 1498 aa40.86■■■■■ 4.13
DENND1B-207ENST00000468589 HMGXB3Q12766 1538 aa40.76■■■■■ 4.12
DENND1B-207ENST00000468589 CC2D2AQ9P2K1 1620 aa40.52■■■■■ 4.08
DENND1B-207ENST00000468589 EHMT2Q96KQ7 1210 aa40.47■■■■■ 4.07
DENND1B-207ENST00000468589 WRNQ14191 1432 aaPredicted RBP eCLIP40.39■■■■■ 4.06
DENND1B-207ENST00000468589 SYNJ1O43426 1573 aa40.26■■■■■ 4.04
DENND1B-207ENST00000468589 SOGA1O94964 1423 aa40.23■■■■■ 4.03
DENND1B-207ENST00000468589 CFTRP13569 1480 aa40.14■■■■■ 4.02
DENND1B-207ENST00000468589 RUSC2Q8N2Y8 1516 aa40.11■■■■■ 4.01
DENND1B-207ENST00000468589 CADPSQ9ULU8 1353 aa39.94■■■■□ 3.98
DENND1B-207ENST00000468589 TOP2BQ02880 1626 aa39.92■■■■□ 3.98
DENND1B-207ENST00000468589 CSRNP3Q8WYN3 585 aa39.9■■■■□ 3.98
DENND1B-207ENST00000468589 EEA1Q15075 1411 aa39.87■■■■□ 3.97
DENND1B-207ENST00000468589 BIVM-ERCC5R4GMW8 1640 aa39.82■■■■□ 3.97
DENND1B-207ENST00000468589 CUX1P39880 1505 aa39.82■■■■□ 3.96
DENND1B-207ENST00000468589 PRDM2Q13029 1718 aa39.81■■■■□ 3.96
DENND1B-207ENST00000468589 DNAJC5BQ9UF47 199 aa39.78■■■■□ 3.96
DENND1B-207ENST00000468589 PCGF6Q9BYE7 350 aa39.64■■■■□ 3.94
DENND1B-207ENST00000468589 NESP48681 1621 aa39.64■■■■□ 3.94
DENND1B-207ENST00000468589 UBTFP17480 764 aaKnown RBP39.55■■■■□ 3.92
DENND1B-207ENST00000468589 FANCD2Q9BXW9 1451 aa39.53■■■■□ 3.92
DENND1B-207ENST00000468589 GOLGA3Q08378 1498 aa39.5■■■■□ 3.91
DENND1B-207ENST00000468589 TNIKQ9UKE5 1360 aa39.5■■■■□ 3.91
DENND1B-207ENST00000468589 CEP164Q9UPV0 1460 aa39.43■■■■□ 3.9
DENND1B-207ENST00000468589 CEP162Q5TB80 1403 aa39.41■■■■□ 3.9
DENND1B-207ENST00000468589 KIF21BO75037 1637 aa39.4■■■■□ 3.9
DENND1B-207ENST00000468589 RAPGEF2Q9Y4G8 1499 aa39.33■■■■□ 3.89
DENND1B-207ENST00000468589 LAMC3Q9Y6N6 1575 aa39.33■■■■□ 3.89
DENND1B-207ENST00000468589 FGD5Q6ZNL6 1462 aa39.29■■■■□ 3.88
DENND1B-207ENST00000468589 TRIM26Q12899 539 aaPredicted RBP39.28■■■■□ 3.88
DENND1B-207ENST00000468589 KIF27Q86VH2 1401 aa39.28■■■■□ 3.88
DENND1B-207ENST00000468589 PPARGC1BQ86YN6 1023 aaKnown RBP39.22■■■■□ 3.87
DENND1B-207ENST00000468589 CUX2O14529 1486 aa39.17■■■■□ 3.86
DENND1B-207ENST00000468589 DNMBPQ6XZF7 1577 aa39.16■■■■□ 3.86
DENND1B-207ENST00000468589 PRXQ9BXM0 1461 aa39.15■■■■□ 3.86
DENND1B-207ENST00000468589 TOPBP1Q92547 1522 aa39.15■■■■□ 3.86
DENND1B-207ENST00000468589 PDS5BQ9NTI5 1447 aa39.08■■■■□ 3.85
DENND1B-207ENST00000468589 URB2Q14146 1524 aaKnown RBP39.05■■■■□ 3.84
DENND1B-207ENST00000468589 RANGAP1P46060 587 aaPredicted RBP39.04■■■■□ 3.84
DENND1B-207ENST00000468589 RAD54L2Q9Y4B4 1467 aa39.04■■■■□ 3.84
DENND1B-207ENST00000468589 POLA1P09884 1462 aaPredicted RBP39.02■■■■□ 3.84
DENND1B-207ENST00000468589 ERICH3Q5RHP9 1530 aa39.01■■■■□ 3.84
DENND1B-207ENST00000468589 KIF21AQ7Z4S6 1674 aa39■■■■□ 3.83
DENND1B-207ENST00000468589 IGF1RP08069 1367 aa38.99■■■■□ 3.83
DENND1B-207ENST00000468589 CLIP1P30622 1438 aa38.97■■■■□ 3.83
DENND1B-207ENST00000468589 ABCA10Q8WWZ4 1543 aa38.85■■■■□ 3.81
DENND1B-207ENST00000468589 TTBK1Q5TCY1 1321 aaPredicted RBP38.81■■■■□ 3.8
DENND1B-207ENST00000468589 CARMIL1Q5VZK9 1371 aa38.78■■■■□ 3.8
DENND1B-207ENST00000468589 HRCP23327 699 aa38.75■■■■□ 3.79
DENND1B-207ENST00000468589 VPS8Q8N3P4 1428 aa38.64■■■■□ 3.78
DENND1B-207ENST00000468589 TDRD9Q8NDG6 1382 aaKnown RBP38.64■■■■□ 3.78
DENND1B-207ENST00000468589 WDR97A6NE52 1622 aa38.64■■■■□ 3.78
DENND1B-207ENST00000468589 MRC2Q9UBG0 1479 aa38.57■■■■□ 3.77
DENND1B-207ENST00000468589 ARAP1Q96P48 1450 aa38.55■■■■□ 3.76
DENND1B-207ENST00000468589 TARBP1Q13395 1621 aaKnown RBP38.48■■■■□ 3.75
DENND1B-207ENST00000468589 ABCA5Q8WWZ7 1642 aa38.48■■■■□ 3.75
DENND1B-207ENST00000468589 GAPVD1Q14C86 1478 aa38.46■■■■□ 3.75
DENND1B-207ENST00000468589 ARHGAP35Q9NRY4 1499 aa38.44■■■■□ 3.74
DENND1B-207ENST00000468589 CUL7Q14999 1698 aa38.41■■■■□ 3.74
DENND1B-207ENST00000468589 ERCC6Q03468 1493 aa38.35■■■■□ 3.73
DENND1B-207ENST00000468589 APLP2Q06481 763 aa38.35■■■■□ 3.73
DENND1B-207ENST00000468589 WDR62O43379 1518 aa38.31■■■■□ 3.72
DENND1B-207ENST00000468589 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
DENND1B-207ENST00000468589 P3H3Q8IVL6 736 aa38.19■■■■□ 3.7
DENND1B-207ENST00000468589 ZNF608Q9ULD9 1512 aaPredicted RBP38.17■■■■□ 3.7
DENND1B-207ENST00000468589 IFT140Q96RY7 1462 aa38.15■■■■□ 3.7
DENND1B-207ENST00000468589 PBRM1Q86U86 1689 aa38.15■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms