RNA–Protein interactions for RNA: ENST00000468572.2

CPT2-202, Transcript of carnitine palmitoyltransferase 2, humanhuman

TSL 2

Gene CPT2, Length 772 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT2-202ENST00000468572 NISCHQ9Y2I1 1504 aa49.75■■■■■ 5.55
CPT2-202ENST00000468572 CCDC180Q9P1Z9 1646 aa44.46■■■■■ 4.71
CPT2-202ENST00000468572 ABCC9O60706 1549 aa43.78■■■■■ 4.6
CPT2-202ENST00000468572 RB1CC1Q8TDY2 1594 aa42.06■■■■■ 4.32
CPT2-202ENST00000468572 NACADO15069 1562 aa41.92■■■■■ 4.3
CPT2-202ENST00000468572 DCAF8L2P0C7V8 631 aa41.79■■■■■ 4.28
CPT2-202ENST00000468572 MYO15BQ96JP2 1530 aa41.54■■■■■ 4.24
CPT2-202ENST00000468572 ZCCHC6Q5VYS8 1495 aaKnown RBP41.34■■■■■ 4.21
CPT2-202ENST00000468572 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
CPT2-202ENST00000468572 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
CPT2-202ENST00000468572 PABPN1Q86U42 306 aaKnown RBP eCLIP40.83■■■■■ 4.13
CPT2-202ENST00000468572 BICRAQ9NZM4 1560 aa40.64■■■■■ 4.1
CPT2-202ENST00000468572 SCRIBQ14160 1630 aa40.45■■■■■ 4.07
CPT2-202ENST00000468572 DNAJC5BQ9UF47 199 aa40.42■■■■■ 4.06
CPT2-202ENST00000468572 SHROOM4Q9ULL8 1493 aa40.39■■■■■ 4.06
CPT2-202ENST00000468572 EIF4G1Q04637 1599 aaKnown RBP39.68■■■■□ 3.94
CPT2-202ENST00000468572 CC2D2AQ9P2K1 1620 aa39.61■■■■□ 3.93
CPT2-202ENST00000468572 CECR2Q9BXF3 1484 aa39.43■■■■□ 3.9
CPT2-202ENST00000468572 SMARCA4P51532 1647 aa38.68■■■■□ 3.78
CPT2-202ENST00000468572 BAZ1AQ9NRL2 1556 aaPredicted RBP38.65■■■■□ 3.78
CPT2-202ENST00000468572 NCAPD3P42695 1498 aa38.64■■■■□ 3.78
CPT2-202ENST00000468572 SMARCA2P51531 1590 aa38.59■■■■□ 3.77
CPT2-202ENST00000468572 ATAD2BQ9ULI0 1458 aa38.57■■■■□ 3.76
CPT2-202ENST00000468572 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
CPT2-202ENST00000468572 PEG3Q9GZU2 1588 aa38.32■■■■□ 3.73
CPT2-202ENST00000468572 BAZ1BQ9UIG0 1483 aaKnown RBP38.28■■■■□ 3.72
CPT2-202ENST00000468572 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
CPT2-202ENST00000468572 ERCC6Q03468 1493 aa37.88■■■■□ 3.65
CPT2-202ENST00000468572 WIZO95785 1651 aa37.85■■■■□ 3.65
CPT2-202ENST00000468572 LAMC3Q9Y6N6 1575 aa37.72■■■■□ 3.63
CPT2-202ENST00000468572 RSF1Q96T23 1441 aaPredicted RBP37.72■■■■□ 3.63
CPT2-202ENST00000468572 NESP48681 1621 aa37.72■■■■□ 3.63
CPT2-202ENST00000468572 CUX2O14529 1486 aa37.62■■■■□ 3.61
CPT2-202ENST00000468572 PDS5BQ9NTI5 1447 aa37.52■■■■□ 3.6
CPT2-202ENST00000468572 CADPSQ9ULU8 1353 aa37.51■■■■□ 3.59
CPT2-202ENST00000468572 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
CPT2-202ENST00000468572 KIF21AQ7Z4S6 1674 aa37.31■■■■□ 3.56
CPT2-202ENST00000468572 THOC2Q8NI27 1593 aaKnown RBP37.28■■■■□ 3.56
CPT2-202ENST00000468572 CFTRP13569 1480 aa37.18■■■■□ 3.54
CPT2-202ENST00000468572 MRC2Q9UBG0 1479 aa37.09■■■■□ 3.53
CPT2-202ENST00000468572 CEP164Q9UPV0 1460 aa37.08■■■■□ 3.53
CPT2-202ENST00000468572 FANCD2Q9BXW9 1451 aa37.06■■■■□ 3.52
CPT2-202ENST00000468572 CCDC88BA6NC98 1476 aa37.01■■■■□ 3.52
CPT2-202ENST00000468572 WDR62O43379 1518 aa36.95■■■■□ 3.51
CPT2-202ENST00000468572 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
CPT2-202ENST00000468572 DNAJC5Q9H3Z4 198 aa36.86■■■■□ 3.49
CPT2-202ENST00000468572 URB2Q14146 1524 aaKnown RBP36.64■■■■□ 3.46
CPT2-202ENST00000468572 ABCC8Q09428 1581 aa36.53■■■■□ 3.44
CPT2-202ENST00000468572 SUPT5HO00267 1087 aaKnown RBP36.52■■■■□ 3.44
CPT2-202ENST00000468572 TOPBP1Q92547 1522 aa36.4■■■■□ 3.42
CPT2-202ENST00000468572 DNMBPQ6XZF7 1577 aa36.36■■■■□ 3.41
CPT2-202ENST00000468572 IFT140Q96RY7 1462 aa36.33■■■■□ 3.41
CPT2-202ENST00000468572 ZNF608Q9ULD9 1512 aaPredicted RBP36.08■■■■□ 3.37
CPT2-202ENST00000468572 POLA1P09884 1462 aaPredicted RBP36.05■■■■□ 3.36
CPT2-202ENST00000468572 OSCARQ8IYS5 282 aa36.02■■■■□ 3.36
CPT2-202ENST00000468572 TARBP1Q13395 1621 aaKnown RBP36.01■■■■□ 3.35
CPT2-202ENST00000468572 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
CPT2-202ENST00000468572 SOGA1O94964 1423 aa35.96■■■■□ 3.35
CPT2-202ENST00000468572 CUX1P39880 1505 aa35.93■■■■□ 3.34
CPT2-202ENST00000468572 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
CPT2-202ENST00000468572 RAD54L2Q9Y4B4 1467 aa35.86■■■■□ 3.33
CPT2-202ENST00000468572 AQRO60306 1485 aaKnown RBP eCLIP35.86■■■■□ 3.33
CPT2-202ENST00000468572 WDR97A6NE52 1622 aa35.85■■■■□ 3.33
CPT2-202ENST00000468572 TDRD9Q8NDG6 1382 aaKnown RBP35.74■■■■□ 3.31
CPT2-202ENST00000468572 WRNQ14191 1432 aaPredicted RBP eCLIP35.65■■■■□ 3.3
CPT2-202ENST00000468572 FBLN2P98095 1184 aa35.6■■■■□ 3.29
CPT2-202ENST00000468572 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
CPT2-202ENST00000468572 TOP2BQ02880 1626 aa35.59■■■■□ 3.29
CPT2-202ENST00000468572 BIVM-ERCC5R4GMW8 1640 aa35.59■■■■□ 3.29
CPT2-202ENST00000468572 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
CPT2-202ENST00000468572 CHD1O14646 1710 aa35.58■■■■□ 3.29
CPT2-202ENST00000468572 SNAPC4Q5SXM2 1469 aa35.55■■■■□ 3.28
CPT2-202ENST00000468572 MAGI1Q96QZ7 1491 aaPredicted RBP35.55■■■■□ 3.28
CPT2-202ENST00000468572 GAPVD1Q14C86 1478 aa35.53■■■■□ 3.28
CPT2-202ENST00000468572 TRIM41Q8WV44 630 aa35.49■■■■□ 3.27
CPT2-202ENST00000468572 SYNJ1O43426 1573 aa35.48■■■■□ 3.27
CPT2-202ENST00000468572 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
CPT2-202ENST00000468572 PBRM1Q86U86 1689 aa35.46■■■■□ 3.27
CPT2-202ENST00000468572 ABCA5Q8WWZ7 1642 aa35.44■■■■□ 3.26
CPT2-202ENST00000468572 SYNJ2O15056 1496 aa35.4■■■■□ 3.26
CPT2-202ENST00000468572 RIMBP3CA6NJZ7 1639 aa35.37■■■■□ 3.25
CPT2-202ENST00000468572 RIMBP3BA6NNM3 1639 aa35.37■■■■□ 3.25
CPT2-202ENST00000468572 RIMBP3Q9UFD9 1639 aa35.37■■■■□ 3.25
CPT2-202ENST00000468572 ARHGEF11O15085 1522 aa35.34■■■■□ 3.25
CPT2-202ENST00000468572 CLASP1Q7Z460 1538 aa35.19■■■■□ 3.22
CPT2-202ENST00000468572 ERICH3Q5RHP9 1530 aa35.18■■■■□ 3.22
CPT2-202ENST00000468572 ADAMTS12P58397 1594 aa35.13■■■■□ 3.21
CPT2-202ENST00000468572 FHAD1B1AJZ9 1412 aa35.13■■■■□ 3.21
CPT2-202ENST00000468572 GRIN2AQ12879 1464 aa35.1■■■■□ 3.21
CPT2-202ENST00000468572 CYB5RLQ6IPT4 315 aa35.07■■■■□ 3.2
CPT2-202ENST00000468572 KIF27Q86VH2 1401 aa34.98■■■■□ 3.19
CPT2-202ENST00000468572 ARAP1Q96P48 1450 aa34.98■■■■□ 3.19
CPT2-202ENST00000468572 NUP160Q12769 1436 aa34.95■■■■□ 3.19
CPT2-202ENST00000468572 CEP170Q5SW79 1584 aa34.89■■■■□ 3.18
CPT2-202ENST00000468572 CUL7Q14999 1698 aa34.81■■■■□ 3.16
CPT2-202ENST00000468572 IGF1RP08069 1367 aa34.79■■■■□ 3.16
CPT2-202ENST00000468572 SHROOM2Q13796 1616 aa34.72■■■■□ 3.15
CPT2-202ENST00000468572 JPH4Q96JJ6 628 aa34.64■■■■□ 3.14
CPT2-202ENST00000468572 CARMIL1Q5VZK9 1371 aa34.63■■■■□ 3.13
CPT2-202ENST00000468572 RUSC2Q8N2Y8 1516 aa34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms