RNA–Protein interactions for RNA: ENST00000468516.1

FOXN4-204, Transcript of forkhead box N4, humanhuman

TSL 2

Gene FOXN4, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-204ENST00000468516 NISCHQ9Y2I1 1504 aa28.76■■■□□ 2.19
FOXN4-204ENST00000468516 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
FOXN4-204ENST00000468516 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
FOXN4-204ENST00000468516 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
FOXN4-204ENST00000468516 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
FOXN4-204ENST00000468516 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
FOXN4-204ENST00000468516 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
FOXN4-204ENST00000468516 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
FOXN4-204ENST00000468516 NACADO15069 1562 aa23.09■■□□□ 1.29
FOXN4-204ENST00000468516 ABCC9O60706 1549 aa23■■□□□ 1.27
FOXN4-204ENST00000468516 SCRIBQ14160 1630 aa22.89■■□□□ 1.25
FOXN4-204ENST00000468516 SUPT5HO00267 1087 aaKnown RBP22.83■■□□□ 1.25
FOXN4-204ENST00000468516 RB1CC1Q8TDY2 1594 aa22.77■■□□□ 1.24
FOXN4-204ENST00000468516 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
FOXN4-204ENST00000468516 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
FOXN4-204ENST00000468516 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
FOXN4-204ENST00000468516 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
FOXN4-204ENST00000468516 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
FOXN4-204ENST00000468516 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
FOXN4-204ENST00000468516 BICRAQ9NZM4 1560 aa22.1■■□□□ 1.13
FOXN4-204ENST00000468516 WIZO95785 1651 aa22.05■■□□□ 1.12
FOXN4-204ENST00000468516 SMARCA4P51532 1647 aa22.04■■□□□ 1.12
FOXN4-204ENST00000468516 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
FOXN4-204ENST00000468516 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
FOXN4-204ENST00000468516 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
FOXN4-204ENST00000468516 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
FOXN4-204ENST00000468516 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
FOXN4-204ENST00000468516 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
FOXN4-204ENST00000468516 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.04
FOXN4-204ENST00000468516 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
FOXN4-204ENST00000468516 BAZ1BQ9UIG0 1483 aaKnown RBP21.41■■□□□ 1.02
FOXN4-204ENST00000468516 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
FOXN4-204ENST00000468516 NCAPD3P42695 1498 aa21.29■■□□□ 1
FOXN4-204ENST00000468516 LOC105371045A0A1W2PR82 267 aa21.27■□□□□ 0.99
FOXN4-204ENST00000468516 ABCC8Q09428 1581 aa21.27■□□□□ 0.99
FOXN4-204ENST00000468516 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
FOXN4-204ENST00000468516 EEA1Q15075 1411 aa21.09■□□□□ 0.97
FOXN4-204ENST00000468516 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
FOXN4-204ENST00000468516 FAM9AQ8IZU1 332 aaPredicted RBP21.02■□□□□ 0.95
FOXN4-204ENST00000468516 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
FOXN4-204ENST00000468516 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
FOXN4-204ENST00000468516 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
FOXN4-204ENST00000468516 CFTRP13569 1480 aa20.93■□□□□ 0.94
FOXN4-204ENST00000468516 SOGA1O94964 1423 aa20.93■□□□□ 0.94
FOXN4-204ENST00000468516 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
FOXN4-204ENST00000468516 KIF21BO75037 1637 aa20.83■□□□□ 0.93
FOXN4-204ENST00000468516 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
FOXN4-204ENST00000468516 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
FOXN4-204ENST00000468516 TNIKQ9UKE5 1360 aa20.79■□□□□ 0.92
FOXN4-204ENST00000468516 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
FOXN4-204ENST00000468516 CUX1P39880 1505 aa20.74■□□□□ 0.91
FOXN4-204ENST00000468516 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
FOXN4-204ENST00000468516 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
FOXN4-204ENST00000468516 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
FOXN4-204ENST00000468516 CADPSQ9ULU8 1353 aa20.71■□□□□ 0.91
FOXN4-204ENST00000468516 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
FOXN4-204ENST00000468516 HRCP23327 699 aa20.62■□□□□ 0.89
FOXN4-204ENST00000468516 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
FOXN4-204ENST00000468516 ERICH3Q5RHP9 1530 aa20.61■□□□□ 0.89
FOXN4-204ENST00000468516 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
FOXN4-204ENST00000468516 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
FOXN4-204ENST00000468516 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
FOXN4-204ENST00000468516 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
FOXN4-204ENST00000468516 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
FOXN4-204ENST00000468516 UBTFP17480 764 aaKnown RBP20.47■□□□□ 0.87
FOXN4-204ENST00000468516 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
FOXN4-204ENST00000468516 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
FOXN4-204ENST00000468516 CLIP1P30622 1438 aa20.41■□□□□ 0.86
FOXN4-204ENST00000468516 NESP48681 1621 aa20.36■□□□□ 0.85
FOXN4-204ENST00000468516 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
FOXN4-204ENST00000468516 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
FOXN4-204ENST00000468516 CUX2O14529 1486 aa20.34■□□□□ 0.85
FOXN4-204ENST00000468516 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
FOXN4-204ENST00000468516 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
FOXN4-204ENST00000468516 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
FOXN4-204ENST00000468516 IGF1RP08069 1367 aa20.27■□□□□ 0.84
FOXN4-204ENST00000468516 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
FOXN4-204ENST00000468516 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
FOXN4-204ENST00000468516 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
FOXN4-204ENST00000468516 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
FOXN4-204ENST00000468516 CUL7Q14999 1698 aa20.21■□□□□ 0.83
FOXN4-204ENST00000468516 ZEB1P37275 1124 aaPredicted RBP20.17■□□□□ 0.82
FOXN4-204ENST00000468516 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
FOXN4-204ENST00000468516 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
FOXN4-204ENST00000468516 ABCA5Q8WWZ7 1642 aa20.15■□□□□ 0.82
FOXN4-204ENST00000468516 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
FOXN4-204ENST00000468516 ARHGAP35Q9NRY4 1499 aa20.12■□□□□ 0.81
FOXN4-204ENST00000468516 DNAJC5BQ9UF47 199 aa20.08■□□□□ 0.81
FOXN4-204ENST00000468516 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
FOXN4-204ENST00000468516 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
FOXN4-204ENST00000468516 MRC2Q9UBG0 1479 aa20.02■□□□□ 0.8
FOXN4-204ENST00000468516 MAP3K1Q13233 1512 aa20■□□□□ 0.79
FOXN4-204ENST00000468516 EFCAB5A4FU69 1503 aa19.99■□□□□ 0.79
FOXN4-204ENST00000468516 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
FOXN4-204ENST00000468516 APLP2Q06481 763 aa19.97■□□□□ 0.79
FOXN4-204ENST00000468516 WDR62O43379 1518 aa19.95■□□□□ 0.78
FOXN4-204ENST00000468516 PBRM1Q86U86 1689 aa19.93■□□□□ 0.78
FOXN4-204ENST00000468516 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
FOXN4-204ENST00000468516 RANGAP1P46060 587 aaPredicted RBP19.89■□□□□ 0.77
FOXN4-204ENST00000468516 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms