RNA–Protein interactions for RNA: ENST00000468512.1

CDC42BPG-202, Transcript of CDC42 binding protein kinase gamma, humanhuman

TSL 5

Gene CDC42BPG, Length 294 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-202ENST00000468512 NISCHQ9Y2I1 1504 aa36.74■■■■□ 3.47
CDC42BPG-202ENST00000468512 CCDC180Q9P1Z9 1646 aa32.75■■■□□ 2.83
CDC42BPG-202ENST00000468512 ABCC9O60706 1549 aa32.09■■■□□ 2.73
CDC42BPG-202ENST00000468512 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
CDC42BPG-202ENST00000468512 NACADO15069 1562 aa30.78■■■□□ 2.52
CDC42BPG-202ENST00000468512 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
CDC42BPG-202ENST00000468512 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
CDC42BPG-202ENST00000468512 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
CDC42BPG-202ENST00000468512 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
CDC42BPG-202ENST00000468512 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
CDC42BPG-202ENST00000468512 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
CDC42BPG-202ENST00000468512 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
CDC42BPG-202ENST00000468512 SCRIBQ14160 1630 aa29.88■■■□□ 2.37
CDC42BPG-202ENST00000468512 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
CDC42BPG-202ENST00000468512 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
CDC42BPG-202ENST00000468512 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
CDC42BPG-202ENST00000468512 CC2D2AQ9P2K1 1620 aa29.03■■■□□ 2.24
CDC42BPG-202ENST00000468512 CECR2Q9BXF3 1484 aa28.83■■■□□ 2.21
CDC42BPG-202ENST00000468512 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
CDC42BPG-202ENST00000468512 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
CDC42BPG-202ENST00000468512 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
CDC42BPG-202ENST00000468512 ATAD2BQ9ULI0 1458 aa28.37■■■□□ 2.13
CDC42BPG-202ENST00000468512 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
CDC42BPG-202ENST00000468512 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
CDC42BPG-202ENST00000468512 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
CDC42BPG-202ENST00000468512 PEG3Q9GZU2 1588 aa28.24■■■□□ 2.11
CDC42BPG-202ENST00000468512 BAZ1BQ9UIG0 1483 aaKnown RBP28.18■■■□□ 2.1
CDC42BPG-202ENST00000468512 WIZO95785 1651 aa28.04■■■□□ 2.08
CDC42BPG-202ENST00000468512 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
CDC42BPG-202ENST00000468512 NESP48681 1621 aa27.74■■■□□ 2.03
CDC42BPG-202ENST00000468512 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
CDC42BPG-202ENST00000468512 ERCC6Q03468 1493 aa27.7■■■□□ 2.02
CDC42BPG-202ENST00000468512 LAMC3Q9Y6N6 1575 aa27.68■■■□□ 2.02
CDC42BPG-202ENST00000468512 CADPSQ9ULU8 1353 aa27.54■■■□□ 2
CDC42BPG-202ENST00000468512 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
CDC42BPG-202ENST00000468512 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
CDC42BPG-202ENST00000468512 CUX2O14529 1486 aa27.39■■□□□ 1.98
CDC42BPG-202ENST00000468512 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
CDC42BPG-202ENST00000468512 CFTRP13569 1480 aa27.36■■□□□ 1.97
CDC42BPG-202ENST00000468512 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
CDC42BPG-202ENST00000468512 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
CDC42BPG-202ENST00000468512 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
CDC42BPG-202ENST00000468512 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
CDC42BPG-202ENST00000468512 SUPT5HO00267 1087 aaKnown RBP27.23■■□□□ 1.95
CDC42BPG-202ENST00000468512 MRC2Q9UBG0 1479 aa27.2■■□□□ 1.95
CDC42BPG-202ENST00000468512 WDR62O43379 1518 aa27.11■■□□□ 1.93
CDC42BPG-202ENST00000468512 URB2Q14146 1524 aaKnown RBP26.97■■□□□ 1.91
CDC42BPG-202ENST00000468512 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
CDC42BPG-202ENST00000468512 ABCC8Q09428 1581 aa26.8■■□□□ 1.88
CDC42BPG-202ENST00000468512 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
CDC42BPG-202ENST00000468512 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
CDC42BPG-202ENST00000468512 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
CDC42BPG-202ENST00000468512 CUX1P39880 1505 aa26.57■■□□□ 1.84
CDC42BPG-202ENST00000468512 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
CDC42BPG-202ENST00000468512 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
CDC42BPG-202ENST00000468512 TARBP1Q13395 1621 aaKnown RBP26.52■■□□□ 1.84
CDC42BPG-202ENST00000468512 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
CDC42BPG-202ENST00000468512 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
CDC42BPG-202ENST00000468512 SOGA1O94964 1423 aa26.46■■□□□ 1.83
CDC42BPG-202ENST00000468512 RAD54L2Q9Y4B4 1467 aa26.45■■□□□ 1.82
CDC42BPG-202ENST00000468512 WRNQ14191 1432 aaPredicted RBP eCLIP26.38■■□□□ 1.81
CDC42BPG-202ENST00000468512 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.812e-8■■■■■ 35.8
CDC42BPG-202ENST00000468512 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
CDC42BPG-202ENST00000468512 TOP2BQ02880 1626 aa26.34■■□□□ 1.81
CDC42BPG-202ENST00000468512 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
CDC42BPG-202ENST00000468512 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
CDC42BPG-202ENST00000468512 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
CDC42BPG-202ENST00000468512 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
CDC42BPG-202ENST00000468512 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
CDC42BPG-202ENST00000468512 CHD1O14646 1710 aa26.19■■□□□ 1.78
CDC42BPG-202ENST00000468512 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
CDC42BPG-202ENST00000468512 GRIN2BQ13224 1484 aa26.17■■□□□ 1.78
CDC42BPG-202ENST00000468512 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
CDC42BPG-202ENST00000468512 ABCA5Q8WWZ7 1642 aa26.16■■□□□ 1.78
CDC42BPG-202ENST00000468512 SNAPC4Q5SXM2 1469 aa26.15■■□□□ 1.78
CDC42BPG-202ENST00000468512 FBLN2P98095 1184 aa26.12■■□□□ 1.77
CDC42BPG-202ENST00000468512 MAGI1Q96QZ7 1491 aaPredicted RBP26.11■■□□□ 1.77
CDC42BPG-202ENST00000468512 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
CDC42BPG-202ENST00000468512 SYNJ2O15056 1496 aa26■■□□□ 1.75
CDC42BPG-202ENST00000468512 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
CDC42BPG-202ENST00000468512 ADAMTS12P58397 1594 aa25.91■■□□□ 1.74
CDC42BPG-202ENST00000468512 RIMBP3CA6NJZ7 1639 aa25.86■■□□□ 1.73
CDC42BPG-202ENST00000468512 RIMBP3BA6NNM3 1639 aa25.86■■□□□ 1.73
CDC42BPG-202ENST00000468512 RIMBP3Q9UFD9 1639 aa25.86■■□□□ 1.73
CDC42BPG-202ENST00000468512 FHAD1B1AJZ9 1412 aa25.85■■□□□ 1.73
CDC42BPG-202ENST00000468512 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
CDC42BPG-202ENST00000468512 GRIN2AQ12879 1464 aa25.83■■□□□ 1.73
CDC42BPG-202ENST00000468512 ARHGEF11O15085 1522 aa25.83■■□□□ 1.72
CDC42BPG-202ENST00000468512 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.72
CDC42BPG-202ENST00000468512 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
CDC42BPG-202ENST00000468512 CUL7Q14999 1698 aa25.72■■□□□ 1.71
CDC42BPG-202ENST00000468512 CEP170Q5SW79 1584 aa25.71■■□□□ 1.71
CDC42BPG-202ENST00000468512 IGF1RP08069 1367 aa25.69■■□□□ 1.7
CDC42BPG-202ENST00000468512 NUP160Q12769 1436 aa25.69■■□□□ 1.7
CDC42BPG-202ENST00000468512 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
CDC42BPG-202ENST00000468512 CYB5RLQ6IPT4 315 aa25.59■■□□□ 1.69
CDC42BPG-202ENST00000468512 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
CDC42BPG-202ENST00000468512 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
CDC42BPG-202ENST00000468512 SHROOM2Q13796 1616 aa25.54■■□□□ 1.68
CDC42BPG-202ENST00000468512 ERCC6L2Q5T890 1561 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms