RNA–Protein interactions for RNA: ENST00000468491.1

PDZD4-203, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 665 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-203ENST00000468491 NISCHQ9Y2I1 1504 aa46.15■■■■■ 4.98
PDZD4-203ENST00000468491 CCDC180Q9P1Z9 1646 aa41.25■■■■■ 4.19
PDZD4-203ENST00000468491 ABCC9O60706 1549 aa40.52■■■■■ 4.08
PDZD4-203ENST00000468491 RB1CC1Q8TDY2 1594 aa38.88■■■■□ 3.81
PDZD4-203ENST00000468491 NACADO15069 1562 aa38.75■■■■□ 3.79
PDZD4-203ENST00000468491 DCAF8L2P0C7V8 631 aa38.55■■■■□ 3.76
PDZD4-203ENST00000468491 MYO15BQ96JP2 1530 aa38.42■■■■□ 3.74
PDZD4-203ENST00000468491 ZCCHC6Q5VYS8 1495 aaKnown RBP38.41■■■■□ 3.74
PDZD4-203ENST00000468491 UNC13AQ9UPW8 1703 aa38.18■■■■□ 3.7
PDZD4-203ENST00000468491 DCAF1Q9Y4B6 1507 aa38.17■■■■□ 3.7
PDZD4-203ENST00000468491 BICRAQ9NZM4 1560 aa37.76■■■■□ 3.64
PDZD4-203ENST00000468491 PABPN1Q86U42 306 aaKnown RBP eCLIP37.75■■■■□ 3.63
PDZD4-203ENST00000468491 SCRIBQ14160 1630 aa37.59■■■■□ 3.61
PDZD4-203ENST00000468491 DNAJC5BQ9UF47 199 aa37.38■■■■□ 3.57
PDZD4-203ENST00000468491 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
PDZD4-203ENST00000468491 EIF4G1Q04637 1599 aaKnown RBP36.76■■■■□ 3.48
PDZD4-203ENST00000468491 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
PDZD4-203ENST00000468491 CECR2Q9BXF3 1484 aa36.42■■■■□ 3.42
PDZD4-203ENST00000468491 SMARCA4P51532 1647 aa35.93■■■■□ 3.34
PDZD4-203ENST00000468491 BAZ1AQ9NRL2 1556 aaPredicted RBP35.8■■■■□ 3.32
PDZD4-203ENST00000468491 NCAPD3P42695 1498 aa35.72■■■■□ 3.31
PDZD4-203ENST00000468491 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
PDZD4-203ENST00000468491 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
PDZD4-203ENST00000468491 HMGXB3Q12766 1538 aa35.58■■■■□ 3.29
PDZD4-203ENST00000468491 MROH2BQ7Z745 1585 aa35.58■■■■□ 3.29
PDZD4-203ENST00000468491 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
PDZD4-203ENST00000468491 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
PDZD4-203ENST00000468491 WIZO95785 1651 aa35.25■■■■□ 3.23
PDZD4-203ENST00000468491 RSF1Q96T23 1441 aaPredicted RBP35.02■■■■□ 3.2
PDZD4-203ENST00000468491 NESP48681 1621 aa35.01■■■■□ 3.19
PDZD4-203ENST00000468491 ERCC6Q03468 1493 aa34.92■■■■□ 3.18
PDZD4-203ENST00000468491 LAMC3Q9Y6N6 1575 aa34.89■■■■□ 3.18
PDZD4-203ENST00000468491 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
PDZD4-203ENST00000468491 KIF21AQ7Z4S6 1674 aa34.7■■■■□ 3.14
PDZD4-203ENST00000468491 CUX2O14529 1486 aa34.65■■■■□ 3.14
PDZD4-203ENST00000468491 CADPSQ9ULU8 1353 aa34.64■■■■□ 3.14
PDZD4-203ENST00000468491 THOC2Q8NI27 1593 aaKnown RBP34.6■■■■□ 3.13
PDZD4-203ENST00000468491 PDS5BQ9NTI5 1447 aa34.57■■■■□ 3.13
PDZD4-203ENST00000468491 CFTRP13569 1480 aa34.41■■■■□ 3.1
PDZD4-203ENST00000468491 CCDC88BA6NC98 1476 aa34.35■■■■□ 3.09
PDZD4-203ENST00000468491 PRDM2Q13029 1718 aa34.35■■■■□ 3.09
PDZD4-203ENST00000468491 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
PDZD4-203ENST00000468491 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
PDZD4-203ENST00000468491 CEP164Q9UPV0 1460 aa34.28■■■■□ 3.08
PDZD4-203ENST00000468491 WDR62O43379 1518 aa34.22■■■■□ 3.07
PDZD4-203ENST00000468491 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
PDZD4-203ENST00000468491 SUPT5HO00267 1087 aaKnown RBP33.88■■■■□ 3.01
PDZD4-203ENST00000468491 DNAJC5Q9H3Z4 198 aa33.84■■■■□ 3.01
PDZD4-203ENST00000468491 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
PDZD4-203ENST00000468491 DNMBPQ6XZF7 1577 aa33.7■■■□□ 2.99
PDZD4-203ENST00000468491 ABCC8Q09428 1581 aa33.67■■■□□ 2.98
PDZD4-203ENST00000468491 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
PDZD4-203ENST00000468491 ZNF608Q9ULD9 1512 aaPredicted RBP33.46■■■□□ 2.95
PDZD4-203ENST00000468491 TARBP1Q13395 1621 aaKnown RBP33.44■■■□□ 2.94
PDZD4-203ENST00000468491 POLA1P09884 1462 aaPredicted RBP33.43■■■□□ 2.94
PDZD4-203ENST00000468491 CUX1P39880 1505 aa33.4■■■□□ 2.94
PDZD4-203ENST00000468491 EIF4G3O43432 1585 aaKnown RBP33.38■■■□□ 2.93
PDZD4-203ENST00000468491 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
PDZD4-203ENST00000468491 RAD54L2Q9Y4B4 1467 aa33.28■■■□□ 2.92
PDZD4-203ENST00000468491 SOGA1O94964 1423 aa33.23■■■□□ 2.91
PDZD4-203ENST00000468491 AQRO60306 1485 aaKnown RBP eCLIP33.2■■■□□ 2.91
PDZD4-203ENST00000468491 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
PDZD4-203ENST00000468491 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
PDZD4-203ENST00000468491 OSCARQ8IYS5 282 aa33.08■■■□□ 2.89
PDZD4-203ENST00000468491 CHD1O14646 1710 aa33.08■■■□□ 2.89
PDZD4-203ENST00000468491 TDRD9Q8NDG6 1382 aaKnown RBP33.08■■■□□ 2.89
PDZD4-203ENST00000468491 TOP2BQ02880 1626 aa33.06■■■□□ 2.88
PDZD4-203ENST00000468491 SYNJ1O43426 1573 aa33.05■■■□□ 2.88
PDZD4-203ENST00000468491 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
PDZD4-203ENST00000468491 PBRM1Q86U86 1689 aa32.97■■■□□ 2.87
PDZD4-203ENST00000468491 ABCA10Q8WWZ4 1543 aa32.96■■■□□ 2.87
PDZD4-203ENST00000468491 ABCA5Q8WWZ7 1642 aa32.93■■■□□ 2.86
PDZD4-203ENST00000468491 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
PDZD4-203ENST00000468491 GRIN2BQ13224 1484 aa32.9■■■□□ 2.86
PDZD4-203ENST00000468491 GAPVD1Q14C86 1478 aa32.87■■■□□ 2.85
PDZD4-203ENST00000468491 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
PDZD4-203ENST00000468491 FBLN2P98095 1184 aa32.8■■■□□ 2.84
PDZD4-203ENST00000468491 RIMBP3CA6NJZ7 1639 aa32.76■■■□□ 2.83
PDZD4-203ENST00000468491 RIMBP3BA6NNM3 1639 aa32.76■■■□□ 2.83
PDZD4-203ENST00000468491 RIMBP3Q9UFD9 1639 aa32.76■■■□□ 2.83
PDZD4-203ENST00000468491 SYNJ2O15056 1496 aa32.73■■■□□ 2.83
PDZD4-203ENST00000468491 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
PDZD4-203ENST00000468491 CHMP7Q8WUX9 453 aaPredicted RBP32.66■■■□□ 2.82
PDZD4-203ENST00000468491 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
PDZD4-203ENST00000468491 CLASP1Q7Z460 1538 aa32.62■■■□□ 2.81
PDZD4-203ENST00000468491 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
PDZD4-203ENST00000468491 ERICH3Q5RHP9 1530 aa32.57■■■□□ 2.8
PDZD4-203ENST00000468491 GRIN2AQ12879 1464 aa32.5■■■□□ 2.79
PDZD4-203ENST00000468491 FHAD1B1AJZ9 1412 aa32.46■■■□□ 2.79
PDZD4-203ENST00000468491 CEP170Q5SW79 1584 aa32.41■■■□□ 2.78
PDZD4-203ENST00000468491 ARAP1Q96P48 1450 aa32.39■■■□□ 2.78
PDZD4-203ENST00000468491 NUP160Q12769 1436 aa32.35■■■□□ 2.77
PDZD4-203ENST00000468491 KIF27Q86VH2 1401 aa32.34■■■□□ 2.77
PDZD4-203ENST00000468491 CUL7Q14999 1698 aa32.28■■■□□ 2.76
PDZD4-203ENST00000468491 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
PDZD4-203ENST00000468491 SHROOM2Q13796 1616 aa32.22■■■□□ 2.75
PDZD4-203ENST00000468491 IGF1RP08069 1367 aa32.22■■■□□ 2.75
PDZD4-203ENST00000468491 ERCC6L2Q5T890 1561 aa32.17■■■□□ 2.74
PDZD4-203ENST00000468491 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
PDZD4-203ENST00000468491 CARMIL1Q5VZK9 1371 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms