RNA–Protein interactions for RNA: ENST00000468429.5

PCBP3-210, Transcript of poly(rC) binding protein 3, humanhuman

TSL 3

Gene PCBP3, Length 829 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-210ENST00000468429 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
PCBP3-210ENST00000468429 ABCC9O60706 1549 aa25.17■■□□□ 1.62
PCBP3-210ENST00000468429 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
PCBP3-210ENST00000468429 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
PCBP3-210ENST00000468429 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
PCBP3-210ENST00000468429 NACADO15069 1562 aa23.56■■□□□ 1.36
PCBP3-210ENST00000468429 UNC13AQ9UPW8 1703 aa23.32■■□□□ 1.32
PCBP3-210ENST00000468429 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
PCBP3-210ENST00000468429 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
PCBP3-210ENST00000468429 MYO15BQ96JP2 1530 aa23.13■■□□□ 1.29
PCBP3-210ENST00000468429 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
PCBP3-210ENST00000468429 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
PCBP3-210ENST00000468429 CC2D2AQ9P2K1 1620 aa22.78■■□□□ 1.24
PCBP3-210ENST00000468429 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
PCBP3-210ENST00000468429 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
PCBP3-210ENST00000468429 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.21
PCBP3-210ENST00000468429 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
PCBP3-210ENST00000468429 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
PCBP3-210ENST00000468429 DNAJC5Q9H3Z4 198 aa22.46■■□□□ 1.19
PCBP3-210ENST00000468429 CUX2O14529 1486 aa22.01■■□□□ 1.11
PCBP3-210ENST00000468429 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
PCBP3-210ENST00000468429 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
PCBP3-210ENST00000468429 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
PCBP3-210ENST00000468429 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
PCBP3-210ENST00000468429 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
PCBP3-210ENST00000468429 NESP48681 1621 aa21.48■■□□□ 1.03
PCBP3-210ENST00000468429 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
PCBP3-210ENST00000468429 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
PCBP3-210ENST00000468429 LAMC3Q9Y6N6 1575 aa21.35■■□□□ 1.01
PCBP3-210ENST00000468429 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
PCBP3-210ENST00000468429 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
PCBP3-210ENST00000468429 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
PCBP3-210ENST00000468429 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
PCBP3-210ENST00000468429 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
PCBP3-210ENST00000468429 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
PCBP3-210ENST00000468429 WDR62O43379 1518 aa21.06■□□□□ 0.96
PCBP3-210ENST00000468429 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
PCBP3-210ENST00000468429 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
PCBP3-210ENST00000468429 CADPSQ9ULU8 1353 aa21■□□□□ 0.95
PCBP3-210ENST00000468429 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
PCBP3-210ENST00000468429 WIZO95785 1651 aa20.8■□□□□ 0.92
PCBP3-210ENST00000468429 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
PCBP3-210ENST00000468429 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
PCBP3-210ENST00000468429 RSF1Q96T23 1441 aaPredicted RBP20.78■□□□□ 0.92
PCBP3-210ENST00000468429 CFTRP13569 1480 aa20.69■□□□□ 0.9
PCBP3-210ENST00000468429 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
PCBP3-210ENST00000468429 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
PCBP3-210ENST00000468429 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
PCBP3-210ENST00000468429 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
PCBP3-210ENST00000468429 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
PCBP3-210ENST00000468429 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
PCBP3-210ENST00000468429 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
PCBP3-210ENST00000468429 IFT140Q96RY7 1462 aa20.47■□□□□ 0.87
PCBP3-210ENST00000468429 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
PCBP3-210ENST00000468429 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
PCBP3-210ENST00000468429 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
PCBP3-210ENST00000468429 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
PCBP3-210ENST00000468429 CHD1O14646 1710 aa20.31■□□□□ 0.84
PCBP3-210ENST00000468429 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
PCBP3-210ENST00000468429 CYB5RLQ6IPT4 315 aa20.29■□□□□ 0.84
PCBP3-210ENST00000468429 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
PCBP3-210ENST00000468429 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
PCBP3-210ENST00000468429 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
PCBP3-210ENST00000468429 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
PCBP3-210ENST00000468429 TRHP20396 242 aaPredicted RBP20.2■□□□□ 0.82
PCBP3-210ENST00000468429 AQRO60306 1485 aaKnown RBP eCLIP20.16■□□□□ 0.82
PCBP3-210ENST00000468429 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
PCBP3-210ENST00000468429 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
PCBP3-210ENST00000468429 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
PCBP3-210ENST00000468429 FBLN2P98095 1184 aa20.04■□□□□ 0.8
PCBP3-210ENST00000468429 SYNJ1O43426 1573 aa20■□□□□ 0.79
PCBP3-210ENST00000468429 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
PCBP3-210ENST00000468429 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
PCBP3-210ENST00000468429 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
PCBP3-210ENST00000468429 RAD54L2Q9Y4B4 1467 aa19.97■□□□□ 0.79
PCBP3-210ENST00000468429 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
PCBP3-210ENST00000468429 SOGA1O94964 1423 aa19.94■□□□□ 0.78
PCBP3-210ENST00000468429 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
PCBP3-210ENST00000468429 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
PCBP3-210ENST00000468429 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
PCBP3-210ENST00000468429 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
PCBP3-210ENST00000468429 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
PCBP3-210ENST00000468429 PBRM1Q86U86 1689 aa19.81■□□□□ 0.76
PCBP3-210ENST00000468429 CUX1P39880 1505 aa19.79■□□□□ 0.76
PCBP3-210ENST00000468429 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
PCBP3-210ENST00000468429 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
PCBP3-210ENST00000468429 ERCC6L2Q5T890 1561 aa19.66■□□□□ 0.74
PCBP3-210ENST00000468429 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
PCBP3-210ENST00000468429 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
PCBP3-210ENST00000468429 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
PCBP3-210ENST00000468429 CEP170Q5SW79 1584 aa19.62■□□□□ 0.73
PCBP3-210ENST00000468429 KIF13AQ9H1H9 1805 aa19.62■□□□□ 0.73
PCBP3-210ENST00000468429 TOP2BQ02880 1626 aa19.61■□□□□ 0.73
PCBP3-210ENST00000468429 NUP160Q12769 1436 aa19.6■□□□□ 0.73
PCBP3-210ENST00000468429 WRNQ14191 1432 aaPredicted RBP eCLIP19.6■□□□□ 0.73
PCBP3-210ENST00000468429 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
PCBP3-210ENST00000468429 FHAD1B1AJZ9 1412 aa19.47■□□□□ 0.71
PCBP3-210ENST00000468429 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
PCBP3-210ENST00000468429 ABCC10Q5T3U5 1492 aa19.41■□□□□ 0.7
PCBP3-210ENST00000468429 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 711.8 ms