RNA–Protein interactions for RNA: ENST00000468397.1

CDK11A-212, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-212ENST00000468397 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
CDK11A-212ENST00000468397 CCDC180Q9P1Z9 1646 aa35.5■■■■□ 3.27
CDK11A-212ENST00000468397 ABCC9O60706 1549 aa34.53■■■■□ 3.12
CDK11A-212ENST00000468397 RB1CC1Q8TDY2 1594 aa33.34■■■□□ 2.93
CDK11A-212ENST00000468397 NACADO15069 1562 aa33.32■■■□□ 2.92
CDK11A-212ENST00000468397 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
CDK11A-212ENST00000468397 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
CDK11A-212ENST00000468397 MYO15BQ96JP2 1530 aa33.17■■■□□ 2.9
CDK11A-212ENST00000468397 DCAF1Q9Y4B6 1507 aa33.07■■■□□ 2.89
CDK11A-212ENST00000468397 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
CDK11A-212ENST00000468397 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
CDK11A-212ENST00000468397 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.75
CDK11A-212ENST00000468397 PABPN1Q86U42 306 aaKnown RBP eCLIP32.25■■■□□ 2.75
CDK11A-212ENST00000468397 SHROOM4Q9ULL8 1493 aa32.02■■■□□ 2.72
CDK11A-212ENST00000468397 DNAJC5BQ9UF47 199 aa31.45■■■□□ 2.63
CDK11A-212ENST00000468397 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
CDK11A-212ENST00000468397 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.59
CDK11A-212ENST00000468397 CECR2Q9BXF3 1484 aa31.05■■■□□ 2.56
CDK11A-212ENST00000468397 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
CDK11A-212ENST00000468397 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
CDK11A-212ENST00000468397 SMARCA2P51531 1590 aa30.76■■■□□ 2.52
CDK11A-212ENST00000468397 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
CDK11A-212ENST00000468397 ATAD2BQ9ULI0 1458 aa30.75■■■□□ 2.51
CDK11A-212ENST00000468397 NCAPD3P42695 1498 aa30.7■■■□□ 2.51
CDK11A-212ENST00000468397 PEG3Q9GZU2 1588 aa30.67■■■□□ 2.5
CDK11A-212ENST00000468397 HMGXB3Q12766 1538 aa30.62■■■□□ 2.49
CDK11A-212ENST00000468397 BAZ1BQ9UIG0 1483 aaKnown RBP30.54■■■□□ 2.48
CDK11A-212ENST00000468397 RSF1Q96T23 1441 aaPredicted RBP30.45■■■□□ 2.46
CDK11A-212ENST00000468397 WIZO95785 1651 aa30.45■■■□□ 2.46
CDK11A-212ENST00000468397 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
CDK11A-212ENST00000468397 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
CDK11A-212ENST00000468397 NESP48681 1621 aa29.9■■■□□ 2.38
CDK11A-212ENST00000468397 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
CDK11A-212ENST00000468397 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
CDK11A-212ENST00000468397 SUPT5HO00267 1087 aaKnown RBP29.78■■■□□ 2.36
CDK11A-212ENST00000468397 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
CDK11A-212ENST00000468397 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
CDK11A-212ENST00000468397 CFTRP13569 1480 aa29.68■■■□□ 2.34
CDK11A-212ENST00000468397 KIF21AQ7Z4S6 1674 aa29.61■■■□□ 2.33
CDK11A-212ENST00000468397 PRDM2Q13029 1718 aa29.55■■■□□ 2.32
CDK11A-212ENST00000468397 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
CDK11A-212ENST00000468397 CEP164Q9UPV0 1460 aa29.47■■■□□ 2.31
CDK11A-212ENST00000468397 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
CDK11A-212ENST00000468397 CUX2O14529 1486 aa29.42■■■□□ 2.3
CDK11A-212ENST00000468397 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
CDK11A-212ENST00000468397 WDR62O43379 1518 aa29.28■■■□□ 2.28
CDK11A-212ENST00000468397 URB2Q14146 1524 aaKnown RBP29.17■■■□□ 2.26
CDK11A-212ENST00000468397 ABCC8Q09428 1581 aa29.08■■■□□ 2.25
CDK11A-212ENST00000468397 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
CDK11A-212ENST00000468397 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
CDK11A-212ENST00000468397 CUX1P39880 1505 aa28.86■■■□□ 2.21
CDK11A-212ENST00000468397 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
CDK11A-212ENST00000468397 POLA1P09884 1462 aaPredicted RBP28.79■■■□□ 2.2
CDK11A-212ENST00000468397 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
CDK11A-212ENST00000468397 WRNQ14191 1432 aaPredicted RBP eCLIP28.74■■■□□ 2.19
CDK11A-212ENST00000468397 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
CDK11A-212ENST00000468397 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
CDK11A-212ENST00000468397 TOP2BQ02880 1626 aa28.68■■■□□ 2.18
CDK11A-212ENST00000468397 SOGA1O94964 1423 aa28.67■■■□□ 2.18
CDK11A-212ENST00000468397 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
CDK11A-212ENST00000468397 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
CDK11A-212ENST00000468397 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.17
CDK11A-212ENST00000468397 EIF4G3O43432 1585 aaKnown RBP28.6■■■□□ 2.17
CDK11A-212ENST00000468397 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
CDK11A-212ENST00000468397 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
CDK11A-212ENST00000468397 AQRO60306 1485 aaKnown RBP eCLIP28.5■■■□□ 2.154e-7■■□□□ 13.8
CDK11A-212ENST00000468397 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
CDK11A-212ENST00000468397 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
CDK11A-212ENST00000468397 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
CDK11A-212ENST00000468397 GAPVD1Q14C86 1478 aa28.36■■■□□ 2.13
CDK11A-212ENST00000468397 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
CDK11A-212ENST00000468397 PBRM1Q86U86 1689 aa28.33■■■□□ 2.13
CDK11A-212ENST00000468397 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
CDK11A-212ENST00000468397 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
CDK11A-212ENST00000468397 CHD1O14646 1710 aa28.21■■■□□ 2.11
CDK11A-212ENST00000468397 OSCARQ8IYS5 282 aa28.18■■■□□ 2.1
CDK11A-212ENST00000468397 ERICH3Q5RHP9 1530 aa28.17■■■□□ 2.1
CDK11A-212ENST00000468397 FBLN2P98095 1184 aa28.15■■■□□ 2.1
CDK11A-212ENST00000468397 TRIM41Q8WV44 630 aa28.15■■■□□ 2.1
CDK11A-212ENST00000468397 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
CDK11A-212ENST00000468397 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
CDK11A-212ENST00000468397 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
CDK11A-212ENST00000468397 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
CDK11A-212ENST00000468397 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
CDK11A-212ENST00000468397 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
CDK11A-212ENST00000468397 CUL7Q14999 1698 aa27.97■■■□□ 2.07
CDK11A-212ENST00000468397 IGF1RP08069 1367 aa27.96■■■□□ 2.07
CDK11A-212ENST00000468397 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
CDK11A-212ENST00000468397 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
CDK11A-212ENST00000468397 RUSC2Q8N2Y8 1516 aa27.86■■■□□ 2.05
CDK11A-212ENST00000468397 NUP160Q12769 1436 aa27.84■■■□□ 2.05
CDK11A-212ENST00000468397 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
CDK11A-212ENST00000468397 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
CDK11A-212ENST00000468397 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
CDK11A-212ENST00000468397 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
CDK11A-212ENST00000468397 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
CDK11A-212ENST00000468397 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
CDK11A-212ENST00000468397 EEA1Q15075 1411 aa27.72■■■□□ 2.03
CDK11A-212ENST00000468397 RAPGEF2Q9Y4G8 1499 aa27.7■■■□□ 2.02
CDK11A-212ENST00000468397 SHROOM2Q13796 1616 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms