RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
CLDN11-202ENST00000468358 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
CLDN11-202ENST00000468358 ABCC9O60706 1549 aa36.85■■■■□ 3.49
CLDN11-202ENST00000468358 DCAF8L2P0C7V8 631 aa35.37■■■■□ 3.25
CLDN11-202ENST00000468358 RB1CC1Q8TDY2 1594 aa35.37■■■■□ 3.25
CLDN11-202ENST00000468358 NACADO15069 1562 aa35.26■■■■□ 3.24
CLDN11-202ENST00000468358 ZCCHC6Q5VYS8 1495 aaKnown RBP35.05■■■■□ 3.2
CLDN11-202ENST00000468358 MYO15BQ96JP2 1530 aa34.95■■■■□ 3.19
CLDN11-202ENST00000468358 DCAF1Q9Y4B6 1507 aa34.78■■■■□ 3.16
CLDN11-202ENST00000468358 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
CLDN11-202ENST00000468358 PABPN1Q86U42 306 aaKnown RBP eCLIP34.41■■■■□ 3.1
CLDN11-202ENST00000468358 SCRIBQ14160 1630 aa34.28■■■■□ 3.08
CLDN11-202ENST00000468358 BICRAQ9NZM4 1560 aa34.25■■■■□ 3.07
CLDN11-202ENST00000468358 SHROOM4Q9ULL8 1493 aa33.85■■■■□ 3.01
CLDN11-202ENST00000468358 DNAJC5BQ9UF47 199 aa33.81■■■■□ 3
CLDN11-202ENST00000468358 EIF4G1Q04637 1599 aaKnown RBP33.39■■■□□ 2.94
CLDN11-202ENST00000468358 CC2D2AQ9P2K1 1620 aa33.3■■■□□ 2.92
CLDN11-202ENST00000468358 CECR2Q9BXF3 1484 aa33.09■■■□□ 2.89
CLDN11-202ENST00000468358 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
CLDN11-202ENST00000468358 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
CLDN11-202ENST00000468358 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
CLDN11-202ENST00000468358 SMARCA2P51531 1590 aa32.53■■■□□ 2.8
CLDN11-202ENST00000468358 NCAPD3P42695 1498 aa32.5■■■□□ 2.79
CLDN11-202ENST00000468358 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
CLDN11-202ENST00000468358 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
CLDN11-202ENST00000468358 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
CLDN11-202ENST00000468358 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
CLDN11-202ENST00000468358 WIZO95785 1651 aa32.15■■■□□ 2.74
CLDN11-202ENST00000468358 RSF1Q96T23 1441 aaPredicted RBP32.03■■■□□ 2.72
CLDN11-202ENST00000468358 NESP48681 1621 aa31.83■■■□□ 2.69
CLDN11-202ENST00000468358 ERCC6Q03468 1493 aa31.8■■■□□ 2.68
CLDN11-202ENST00000468358 TOP2AP11388 1531 aaKnown RBP31.78■■■□□ 2.68
CLDN11-202ENST00000468358 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
CLDN11-202ENST00000468358 CADPSQ9ULU8 1353 aa31.58■■■□□ 2.65
CLDN11-202ENST00000468358 PDS5BQ9NTI5 1447 aa31.51■■■□□ 2.64
CLDN11-202ENST00000468358 KIF21AQ7Z4S6 1674 aa31.5■■■□□ 2.63
CLDN11-202ENST00000468358 CUX2O14529 1486 aa31.4■■■□□ 2.62
CLDN11-202ENST00000468358 CCDC88BA6NC98 1476 aa31.39■■■□□ 2.62
CLDN11-202ENST00000468358 CFTRP13569 1480 aa31.36■■■□□ 2.61
CLDN11-202ENST00000468358 THOC2Q8NI27 1593 aaKnown RBP31.35■■■□□ 2.61
CLDN11-202ENST00000468358 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
CLDN11-202ENST00000468358 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
CLDN11-202ENST00000468358 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
CLDN11-202ENST00000468358 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
CLDN11-202ENST00000468358 MRC2Q9UBG0 1479 aa31.21■■■□□ 2.59
CLDN11-202ENST00000468358 WDR62O43379 1518 aa31.08■■■□□ 2.57
CLDN11-202ENST00000468358 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
CLDN11-202ENST00000468358 TOPBP1Q92547 1522 aa30.74■■■□□ 2.51
CLDN11-202ENST00000468358 ABCC8Q09428 1581 aa30.72■■■□□ 2.51
CLDN11-202ENST00000468358 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
CLDN11-202ENST00000468358 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
CLDN11-202ENST00000468358 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
CLDN11-202ENST00000468358 POLA1P09884 1462 aaPredicted RBP30.47■■■□□ 2.47
CLDN11-202ENST00000468358 CUX1P39880 1505 aa30.47■■■□□ 2.47
CLDN11-202ENST00000468358 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
CLDN11-202ENST00000468358 FGD5Q6ZNL6 1462 aa30.41■■■□□ 2.46
CLDN11-202ENST00000468358 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
CLDN11-202ENST00000468358 SOGA1O94964 1423 aa30.36■■■□□ 2.45
CLDN11-202ENST00000468358 RAD54L2Q9Y4B4 1467 aa30.36■■■□□ 2.45
CLDN11-202ENST00000468358 EIF4G3O43432 1585 aaKnown RBP30.36■■■□□ 2.45
CLDN11-202ENST00000468358 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
CLDN11-202ENST00000468358 WRNQ14191 1432 aaPredicted RBP eCLIP30.26■■■□□ 2.43
CLDN11-202ENST00000468358 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
CLDN11-202ENST00000468358 BIVM-ERCC5R4GMW8 1640 aa30.19■■■□□ 2.42
CLDN11-202ENST00000468358 SYNJ1O43426 1573 aa30.19■■■□□ 2.42
CLDN11-202ENST00000468358 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
CLDN11-202ENST00000468358 WDR97A6NE52 1622 aa30.14■■■□□ 2.42
CLDN11-202ENST00000468358 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
CLDN11-202ENST00000468358 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
CLDN11-202ENST00000468358 CHD1O14646 1710 aa30.02■■■□□ 2.4
CLDN11-202ENST00000468358 FBLN2P98095 1184 aa30.02■■■□□ 2.4
CLDN11-202ENST00000468358 GRIN2BQ13224 1484 aa30.01■■■□□ 2.4
CLDN11-202ENST00000468358 GAPVD1Q14C86 1478 aa30■■■□□ 2.39
CLDN11-202ENST00000468358 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
CLDN11-202ENST00000468358 PBRM1Q86U86 1689 aa30■■■□□ 2.39
CLDN11-202ENST00000468358 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
CLDN11-202ENST00000468358 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
CLDN11-202ENST00000468358 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
CLDN11-202ENST00000468358 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
CLDN11-202ENST00000468358 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
CLDN11-202ENST00000468358 ADAMTS12P58397 1594 aa29.71■■■□□ 2.35
CLDN11-202ENST00000468358 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
CLDN11-202ENST00000468358 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
CLDN11-202ENST00000468358 RIMBP3Q9UFD9 1639 aa29.67■■■□□ 2.34
CLDN11-202ENST00000468358 FHAD1B1AJZ9 1412 aa29.64■■■□□ 2.34
CLDN11-202ENST00000468358 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
CLDN11-202ENST00000468358 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
CLDN11-202ENST00000468358 KIF27Q86VH2 1401 aa29.63■■■□□ 2.33
CLDN11-202ENST00000468358 GRIN2AQ12879 1464 aa29.62■■■□□ 2.33
CLDN11-202ENST00000468358 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
CLDN11-202ENST00000468358 CEP170Q5SW79 1584 aa29.48■■■□□ 2.31
CLDN11-202ENST00000468358 IGF1RP08069 1367 aa29.47■■■□□ 2.31
CLDN11-202ENST00000468358 CUL7Q14999 1698 aa29.47■■■□□ 2.31
CLDN11-202ENST00000468358 NUP160Q12769 1436 aa29.45■■■□□ 2.31
CLDN11-202ENST00000468358 CYB5RLQ6IPT4 315 aa29.4■■■□□ 2.3
CLDN11-202ENST00000468358 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
CLDN11-202ENST00000468358 CARMIL1Q5VZK9 1371 aa29.34■■■□□ 2.29
CLDN11-202ENST00000468358 RUSC2Q8N2Y8 1516 aa29.32■■■□□ 2.28
CLDN11-202ENST00000468358 SHROOM2Q13796 1616 aa29.26■■■□□ 2.27
CLDN11-202ENST00000468358 ERCC6L2Q5T890 1561 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms