RNA–Protein interactions for RNA: ENST00000468228.3

RN7SL63P-201, Transcript of RNA, 7SL, cytoplasmic 63, pseudogene, humanhuman

BASIC

Gene RN7SL63P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL63P-201ENST00000468228 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
RN7SL63P-201ENST00000468228 ABCC9O60706 1549 aa18.73■□□□□ 0.59
RN7SL63P-201ENST00000468228 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
RN7SL63P-201ENST00000468228 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
RN7SL63P-201ENST00000468228 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
RN7SL63P-201ENST00000468228 NACADO15069 1562 aa17.41■□□□□ 0.38
RN7SL63P-201ENST00000468228 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
RN7SL63P-201ENST00000468228 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
RN7SL63P-201ENST00000468228 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
RN7SL63P-201ENST00000468228 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
RN7SL63P-201ENST00000468228 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
RN7SL63P-201ENST00000468228 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
RN7SL63P-201ENST00000468228 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
RN7SL63P-201ENST00000468228 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
RN7SL63P-201ENST00000468228 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
RN7SL63P-201ENST00000468228 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.28
RN7SL63P-201ENST00000468228 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
RN7SL63P-201ENST00000468228 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
RN7SL63P-201ENST00000468228 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
RN7SL63P-201ENST00000468228 CUX2O14529 1486 aa16.35■□□□□ 0.21
RN7SL63P-201ENST00000468228 ERCC6Q03468 1493 aa16.16■□□□□ 0.18
RN7SL63P-201ENST00000468228 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
RN7SL63P-201ENST00000468228 NESP48681 1621 aa15.98■□□□□ 0.15
RN7SL63P-201ENST00000468228 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
RN7SL63P-201ENST00000468228 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
RN7SL63P-201ENST00000468228 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
RN7SL63P-201ENST00000468228 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
RN7SL63P-201ENST00000468228 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
RN7SL63P-201ENST00000468228 SMARCA4P51532 1647 aa15.83■□□□□ 0.13
RN7SL63P-201ENST00000468228 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
RN7SL63P-201ENST00000468228 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
RN7SL63P-201ENST00000468228 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
RN7SL63P-201ENST00000468228 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
RN7SL63P-201ENST00000468228 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
RN7SL63P-201ENST00000468228 BAZ1AQ9NRL2 1556 aaPredicted RBP15.67■□□□□ 0.1
RN7SL63P-201ENST00000468228 WDR62O43379 1518 aa15.6■□□□□ 0.09
RN7SL63P-201ENST00000468228 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
RN7SL63P-201ENST00000468228 CADPSQ9ULU8 1353 aa15.57■□□□□ 0.08
RN7SL63P-201ENST00000468228 MROH2BQ7Z745 1585 aa15.54■□□□□ 0.08
RN7SL63P-201ENST00000468228 OSCARQ8IYS5 282 aa15.51■□□□□ 0.07
RN7SL63P-201ENST00000468228 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
RN7SL63P-201ENST00000468228 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
RN7SL63P-201ENST00000468228 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
RN7SL63P-201ENST00000468228 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
RN7SL63P-201ENST00000468228 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
RN7SL63P-201ENST00000468228 WIZO95785 1651 aa15.32■□□□□ 0.04
RN7SL63P-201ENST00000468228 CFTRP13569 1480 aa15.31■□□□□ 0.04
RN7SL63P-201ENST00000468228 URB2Q14146 1524 aaKnown RBP15.31■□□□□ 0.04
RN7SL63P-201ENST00000468228 ARHGEF11O15085 1522 aa15.28■□□□□ 0.04
RN7SL63P-201ENST00000468228 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
RN7SL63P-201ENST00000468228 ZNF608Q9ULD9 1512 aaPredicted RBP15.19■□□□□ 0.02
RN7SL63P-201ENST00000468228 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
RN7SL63P-201ENST00000468228 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
RN7SL63P-201ENST00000468228 ARAP1Q96P48 1450 aa15.11■□□□□ 0.01
RN7SL63P-201ENST00000468228 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
RN7SL63P-201ENST00000468228 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
RN7SL63P-201ENST00000468228 SUPT5HO00267 1087 aaKnown RBP15.09■□□□□ 0.01
RN7SL63P-201ENST00000468228 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
RN7SL63P-201ENST00000468228 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
RN7SL63P-201ENST00000468228 TOPBP1Q92547 1522 aa15.05■□□□□ -0
RN7SL63P-201ENST00000468228 CHD1O14646 1710 aa15.04■□□□□ -0
RN7SL63P-201ENST00000468228 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
RN7SL63P-201ENST00000468228 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.01
RN7SL63P-201ENST00000468228 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
RN7SL63P-201ENST00000468228 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
RN7SL63P-201ENST00000468228 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
RN7SL63P-201ENST00000468228 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
RN7SL63P-201ENST00000468228 FBLN2P98095 1184 aa14.9□□□□□ -0.02
RN7SL63P-201ENST00000468228 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
RN7SL63P-201ENST00000468228 POLA1P09884 1462 aaPredicted RBP14.87□□□□□ -0.03
RN7SL63P-201ENST00000468228 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
RN7SL63P-201ENST00000468228 SNAPC4Q5SXM2 1469 aa14.81□□□□□ -0.04
RN7SL63P-201ENST00000468228 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
RN7SL63P-201ENST00000468228 SYNJ1O43426 1573 aa14.79□□□□□ -0.04
RN7SL63P-201ENST00000468228 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
RN7SL63P-201ENST00000468228 SOGA1O94964 1423 aa14.77□□□□□ -0.04
RN7SL63P-201ENST00000468228 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
RN7SL63P-201ENST00000468228 CHMP7Q8WUX9 453 aaPredicted RBP14.74□□□□□ -0.05
RN7SL63P-201ENST00000468228 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
RN7SL63P-201ENST00000468228 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
RN7SL63P-201ENST00000468228 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
RN7SL63P-201ENST00000468228 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
RN7SL63P-201ENST00000468228 CUX1P39880 1505 aa14.63□□□□□ -0.07
RN7SL63P-201ENST00000468228 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
RN7SL63P-201ENST00000468228 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
RN7SL63P-201ENST00000468228 KIF13AQ9H1H9 1805 aa14.56□□□□□ -0.08
RN7SL63P-201ENST00000468228 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
RN7SL63P-201ENST00000468228 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
RN7SL63P-201ENST00000468228 GRIN2AQ12879 1464 aa14.52□□□□□ -0.08
RN7SL63P-201ENST00000468228 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
RN7SL63P-201ENST00000468228 NUP160Q12769 1436 aa14.51□□□□□ -0.09
RN7SL63P-201ENST00000468228 SHROOM2Q13796 1616 aa14.51□□□□□ -0.09
RN7SL63P-201ENST00000468228 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
RN7SL63P-201ENST00000468228 KDM4FA0A1W2PPD8 638 aa14.45□□□□□ -0.1
RN7SL63P-201ENST00000468228 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
RN7SL63P-201ENST00000468228 ABCC10Q5T3U5 1492 aa14.42□□□□□ -0.1
RN7SL63P-201ENST00000468228 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
RN7SL63P-201ENST00000468228 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
RN7SL63P-201ENST00000468228 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
RN7SL63P-201ENST00000468228 MAPKBP1O60336 1514 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms