RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 NISCHQ9Y2I1 1504 aa35.9■■■■□ 3.34
PCOLCE-204ENST00000468214 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
PCOLCE-204ENST00000468214 ABCC9O60706 1549 aa31.65■■■□□ 2.66
PCOLCE-204ENST00000468214 RB1CC1Q8TDY2 1594 aa30.3■■■□□ 2.44
PCOLCE-204ENST00000468214 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
PCOLCE-204ENST00000468214 NACADO15069 1562 aa30.19■■■□□ 2.42
PCOLCE-204ENST00000468214 MYO15BQ96JP2 1530 aa29.88■■■□□ 2.37
PCOLCE-204ENST00000468214 ZCCHC6Q5VYS8 1495 aaKnown RBP29.86■■■□□ 2.37
PCOLCE-204ENST00000468214 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
PCOLCE-204ENST00000468214 UNC13AQ9UPW8 1703 aa29.58■■■□□ 2.33
PCOLCE-204ENST00000468214 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
PCOLCE-204ENST00000468214 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
PCOLCE-204ENST00000468214 SCRIBQ14160 1630 aa29.26■■■□□ 2.27
PCOLCE-204ENST00000468214 DNAJC5BQ9UF47 199 aa29.21■■■□□ 2.27
PCOLCE-204ENST00000468214 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
PCOLCE-204ENST00000468214 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
PCOLCE-204ENST00000468214 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
PCOLCE-204ENST00000468214 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
PCOLCE-204ENST00000468214 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
PCOLCE-204ENST00000468214 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
PCOLCE-204ENST00000468214 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
PCOLCE-204ENST00000468214 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
PCOLCE-204ENST00000468214 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
PCOLCE-204ENST00000468214 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
PCOLCE-204ENST00000468214 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
PCOLCE-204ENST00000468214 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
PCOLCE-204ENST00000468214 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
PCOLCE-204ENST00000468214 WIZO95785 1651 aa27.36■■□□□ 1.97
PCOLCE-204ENST00000468214 ERCC6Q03468 1493 aa27.33■■□□□ 1.97
PCOLCE-204ENST00000468214 NESP48681 1621 aa27.28■■□□□ 1.96
PCOLCE-204ENST00000468214 RSF1Q96T23 1441 aaPredicted RBP27.25■■□□□ 1.95
PCOLCE-204ENST00000468214 LAMC3Q9Y6N6 1575 aa27.17■■□□□ 1.94
PCOLCE-204ENST00000468214 DNAJC5Q9H3Z4 198 aa27.09■■□□□ 1.93
PCOLCE-204ENST00000468214 CUX2O14529 1486 aa27.07■■□□□ 1.92
PCOLCE-204ENST00000468214 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
PCOLCE-204ENST00000468214 CADPSQ9ULU8 1353 aa27.03■■□□□ 1.92
PCOLCE-204ENST00000468214 PDS5BQ9NTI5 1447 aa27.02■■□□□ 1.92
PCOLCE-204ENST00000468214 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
PCOLCE-204ENST00000468214 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
PCOLCE-204ENST00000468214 CFTRP13569 1480 aa26.81■■□□□ 1.88
PCOLCE-204ENST00000468214 MRC2Q9UBG0 1479 aa26.75■■□□□ 1.87
PCOLCE-204ENST00000468214 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
PCOLCE-204ENST00000468214 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
PCOLCE-204ENST00000468214 CCDC88BA6NC98 1476 aa26.74■■□□□ 1.87
PCOLCE-204ENST00000468214 WDR62O43379 1518 aa26.65■■□□□ 1.86
PCOLCE-204ENST00000468214 PRDM2Q13029 1718 aa26.6■■□□□ 1.85
PCOLCE-204ENST00000468214 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
PCOLCE-204ENST00000468214 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
PCOLCE-204ENST00000468214 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
PCOLCE-204ENST00000468214 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
PCOLCE-204ENST00000468214 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
PCOLCE-204ENST00000468214 IFT140Q96RY7 1462 aa26.18■■□□□ 1.78
PCOLCE-204ENST00000468214 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.77
PCOLCE-204ENST00000468214 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
PCOLCE-204ENST00000468214 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
PCOLCE-204ENST00000468214 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
PCOLCE-204ENST00000468214 CUX1P39880 1505 aa25.98■■□□□ 1.75
PCOLCE-204ENST00000468214 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
PCOLCE-204ENST00000468214 SOGA1O94964 1423 aa25.94■■□□□ 1.74
PCOLCE-204ENST00000468214 RAD54L2Q9Y4B4 1467 aa25.93■■□□□ 1.74
PCOLCE-204ENST00000468214 OSCARQ8IYS5 282 aa25.93■■□□□ 1.74
PCOLCE-204ENST00000468214 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.748e-7■■■□□ 16.1
PCOLCE-204ENST00000468214 TDRD9Q8NDG6 1382 aaKnown RBP25.83■■□□□ 1.73
PCOLCE-204ENST00000468214 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
PCOLCE-204ENST00000468214 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
PCOLCE-204ENST00000468214 FBLN2P98095 1184 aa25.72■■□□□ 1.71
PCOLCE-204ENST00000468214 CHD1O14646 1710 aa25.7■■□□□ 1.7
PCOLCE-204ENST00000468214 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
PCOLCE-204ENST00000468214 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
PCOLCE-204ENST00000468214 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
PCOLCE-204ENST00000468214 BIVM-ERCC5R4GMW8 1640 aa25.67■■□□□ 1.7
PCOLCE-204ENST00000468214 SYNJ1O43426 1573 aa25.67■■□□□ 1.7
PCOLCE-204ENST00000468214 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
PCOLCE-204ENST00000468214 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
PCOLCE-204ENST00000468214 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
PCOLCE-204ENST00000468214 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
PCOLCE-204ENST00000468214 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
PCOLCE-204ENST00000468214 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
PCOLCE-204ENST00000468214 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
PCOLCE-204ENST00000468214 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
PCOLCE-204ENST00000468214 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
PCOLCE-204ENST00000468214 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
PCOLCE-204ENST00000468214 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
PCOLCE-204ENST00000468214 ARHGEF11O15085 1522 aa25.5■■□□□ 1.67
PCOLCE-204ENST00000468214 CLASP1Q7Z460 1538 aa25.38■■□□□ 1.65
PCOLCE-204ENST00000468214 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
PCOLCE-204ENST00000468214 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
PCOLCE-204ENST00000468214 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
PCOLCE-204ENST00000468214 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.65
PCOLCE-204ENST00000468214 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
PCOLCE-204ENST00000468214 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
PCOLCE-204ENST00000468214 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
PCOLCE-204ENST00000468214 NUP160Q12769 1436 aa25.21■■□□□ 1.63
PCOLCE-204ENST00000468214 CEP170Q5SW79 1584 aa25.21■■□□□ 1.63
PCOLCE-204ENST00000468214 IGF1RP08069 1367 aa25.12■■□□□ 1.61
PCOLCE-204ENST00000468214 CUL7Q14999 1698 aa25.1■■□□□ 1.61
PCOLCE-204ENST00000468214 SHROOM2Q13796 1616 aa25.03■■□□□ 1.6
PCOLCE-204ENST00000468214 ERCC6L2Q5T890 1561 aa25.02■■□□□ 1.6
PCOLCE-204ENST00000468214 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
PCOLCE-204ENST00000468214 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms