RNA–Protein interactions for RNA: ENST00000468200.2

C12orf40-203, Transcript of chromosome 12 open reading frame 40, humanhuman

TSL 1 (best)

Gene C12orf40, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-203ENST00000468200 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.55
C12orf40-203ENST00000468200 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
C12orf40-203ENST00000468200 ABCC9O60706 1549 aa15.79■□□□□ 0.12
C12orf40-203ENST00000468200 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
C12orf40-203ENST00000468200 RB1CC1Q8TDY2 1594 aa15.52■□□□□ 0.08
C12orf40-203ENST00000468200 NACADO15069 1562 aa15.5■□□□□ 0.07
C12orf40-203ENST00000468200 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
C12orf40-203ENST00000468200 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
C12orf40-203ENST00000468200 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
C12orf40-203ENST00000468200 UNC13AQ9UPW8 1703 aa15.3■□□□□ 0.04
C12orf40-203ENST00000468200 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
C12orf40-203ENST00000468200 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
C12orf40-203ENST00000468200 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
C12orf40-203ENST00000468200 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
C12orf40-203ENST00000468200 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
C12orf40-203ENST00000468200 CC2D2AQ9P2K1 1620 aa14.61□□□□□ -0.07
C12orf40-203ENST00000468200 EIF4G1Q04637 1599 aaKnown RBP14.59□□□□□ -0.07
C12orf40-203ENST00000468200 CECR2Q9BXF3 1484 aa14.46□□□□□ -0.09
C12orf40-203ENST00000468200 CUX2O14529 1486 aa14.34□□□□□ -0.11
C12orf40-203ENST00000468200 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
C12orf40-203ENST00000468200 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
C12orf40-203ENST00000468200 SMARCA4P51532 1647 aa14.3□□□□□ -0.12
C12orf40-203ENST00000468200 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
C12orf40-203ENST00000468200 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
C12orf40-203ENST00000468200 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
C12orf40-203ENST00000468200 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
C12orf40-203ENST00000468200 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
C12orf40-203ENST00000468200 WIZO95785 1651 aa14.17□□□□□ -0.14
C12orf40-203ENST00000468200 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
C12orf40-203ENST00000468200 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
C12orf40-203ENST00000468200 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
C12orf40-203ENST00000468200 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
C12orf40-203ENST00000468200 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
C12orf40-203ENST00000468200 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
C12orf40-203ENST00000468200 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
C12orf40-203ENST00000468200 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
C12orf40-203ENST00000468200 PRDM2Q13029 1718 aa13.83□□□□□ -0.2
C12orf40-203ENST00000468200 WDR62O43379 1518 aa13.77□□□□□ -0.21
C12orf40-203ENST00000468200 NESP48681 1621 aa13.75□□□□□ -0.21
C12orf40-203ENST00000468200 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
C12orf40-203ENST00000468200 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
C12orf40-203ENST00000468200 CFTRP13569 1480 aa13.68□□□□□ -0.22
C12orf40-203ENST00000468200 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
C12orf40-203ENST00000468200 WDR97A6NE52 1622 aa13.58□□□□□ -0.24
C12orf40-203ENST00000468200 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
C12orf40-203ENST00000468200 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
C12orf40-203ENST00000468200 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
C12orf40-203ENST00000468200 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
C12orf40-203ENST00000468200 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
C12orf40-203ENST00000468200 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
C12orf40-203ENST00000468200 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.269e-6■■■■■ 50.1
C12orf40-203ENST00000468200 CUX1P39880 1505 aa13.4□□□□□ -0.26
C12orf40-203ENST00000468200 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
C12orf40-203ENST00000468200 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
C12orf40-203ENST00000468200 CHIC1Q5VXU3 224 aa13.37□□□□□ -0.27
C12orf40-203ENST00000468200 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
C12orf40-203ENST00000468200 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
C12orf40-203ENST00000468200 TOP2BQ02880 1626 aa13.33□□□□□ -0.28
C12orf40-203ENST00000468200 FGD5Q6ZNL6 1462 aa13.31□□□□□ -0.28
C12orf40-203ENST00000468200 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
C12orf40-203ENST00000468200 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
C12orf40-203ENST00000468200 RAD54L2Q9Y4B4 1467 aa13.28□□□□□ -0.28
C12orf40-203ENST00000468200 SOGA1O94964 1423 aa13.25□□□□□ -0.29
C12orf40-203ENST00000468200 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
C12orf40-203ENST00000468200 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
C12orf40-203ENST00000468200 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
C12orf40-203ENST00000468200 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
C12orf40-203ENST00000468200 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
C12orf40-203ENST00000468200 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
C12orf40-203ENST00000468200 TDRD9Q8NDG6 1382 aaKnown RBP13.19□□□□□ -0.3
C12orf40-203ENST00000468200 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
C12orf40-203ENST00000468200 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
C12orf40-203ENST00000468200 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.31
C12orf40-203ENST00000468200 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
C12orf40-203ENST00000468200 CLASP1Q7Z460 1538 aa13.14□□□□□ -0.31
C12orf40-203ENST00000468200 EIF4G3O43432 1585 aaKnown RBP13.14□□□□□ -0.31
C12orf40-203ENST00000468200 CHD1O14646 1710 aa13.1□□□□□ -0.31
C12orf40-203ENST00000468200 KIF27Q86VH2 1401 aa13.1□□□□□ -0.31
C12orf40-203ENST00000468200 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
C12orf40-203ENST00000468200 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
C12orf40-203ENST00000468200 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
C12orf40-203ENST00000468200 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
C12orf40-203ENST00000468200 IGF1RP08069 1367 aa13.03□□□□□ -0.32
C12orf40-203ENST00000468200 PBRM1Q86U86 1689 aa13.02□□□□□ -0.32
C12orf40-203ENST00000468200 SNAPC4Q5SXM2 1469 aa13.01□□□□□ -0.33
C12orf40-203ENST00000468200 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
C12orf40-203ENST00000468200 CSRNP3Q8WYN3 585 aa13.01□□□□□ -0.33
C12orf40-203ENST00000468200 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
C12orf40-203ENST00000468200 EEA1Q15075 1411 aa12.99□□□□□ -0.33
C12orf40-203ENST00000468200 FBLN2P98095 1184 aa12.98□□□□□ -0.33
C12orf40-203ENST00000468200 SHROOM2Q13796 1616 aa12.98□□□□□ -0.33
C12orf40-203ENST00000468200 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
C12orf40-203ENST00000468200 CARMIL1Q5VZK9 1371 aa12.96□□□□□ -0.33
C12orf40-203ENST00000468200 ADAMTS12P58397 1594 aa12.95□□□□□ -0.34
C12orf40-203ENST00000468200 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
C12orf40-203ENST00000468200 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
C12orf40-203ENST00000468200 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
C12orf40-203ENST00000468200 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
C12orf40-203ENST00000468200 CUL7Q14999 1698 aa12.92□□□□□ -0.34
C12orf40-203ENST00000468200 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms