RNA–Protein interactions for RNA: ENST00000468175.1

LRWD1-204, Transcript of leucine rich repeats and WD repeat domain containing 1, humanhuman

TSL 3

Gene LRWD1, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRWD1-204ENST00000468175 NISCHQ9Y2I1 1504 aa49.96■■■■■ 5.59
LRWD1-204ENST00000468175 CCDC180Q9P1Z9 1646 aa44.64■■■■■ 4.74
LRWD1-204ENST00000468175 ABCC9O60706 1549 aa44.43■■■■■ 4.7
LRWD1-204ENST00000468175 RB1CC1Q8TDY2 1594 aa42.42■■■■■ 4.38
LRWD1-204ENST00000468175 NACADO15069 1562 aa42.22■■■■■ 4.35
LRWD1-204ENST00000468175 DCAF8L2P0C7V8 631 aa42.09■■■■■ 4.33
LRWD1-204ENST00000468175 MYO15BQ96JP2 1530 aa41.78■■■■■ 4.28
LRWD1-204ENST00000468175 DNAJC5BQ9UF47 199 aa41.5■■■■■ 4.23
LRWD1-204ENST00000468175 PABPN1Q86U42 306 aaKnown RBP eCLIP41.46■■■■■ 4.23
LRWD1-204ENST00000468175 ZCCHC6Q5VYS8 1495 aaKnown RBP41.46■■■■■ 4.23
LRWD1-204ENST00000468175 DCAF1Q9Y4B6 1507 aa41.33■■■■■ 4.21
LRWD1-204ENST00000468175 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
LRWD1-204ENST00000468175 BICRAQ9NZM4 1560 aa41.15■■■■■ 4.18
LRWD1-204ENST00000468175 SHROOM4Q9ULL8 1493 aa40.71■■■■■ 4.11
LRWD1-204ENST00000468175 SCRIBQ14160 1630 aa40.67■■■■■ 4.1
LRWD1-204ENST00000468175 EIF4G1Q04637 1599 aaKnown RBP40.13■■■■■ 4.01
LRWD1-204ENST00000468175 CC2D2AQ9P2K1 1620 aa40.13■■■■■ 4.01
LRWD1-204ENST00000468175 CECR2Q9BXF3 1484 aa40.03■■■■■ 4
LRWD1-204ENST00000468175 NCAPD3P42695 1498 aa39.03■■■■□ 3.84
LRWD1-204ENST00000468175 ATAD2BQ9ULI0 1458 aa38.91■■■■□ 3.82
LRWD1-204ENST00000468175 SMARCA4P51532 1647 aa38.86■■■■□ 3.81
LRWD1-204ENST00000468175 SMARCA2P51531 1590 aa38.8■■■■□ 3.8
LRWD1-204ENST00000468175 BAZ1AQ9NRL2 1556 aaPredicted RBP38.76■■■■□ 3.8
LRWD1-204ENST00000468175 HMGXB3Q12766 1538 aa38.69■■■■□ 3.78
LRWD1-204ENST00000468175 PEG3Q9GZU2 1588 aa38.53■■■■□ 3.76
LRWD1-204ENST00000468175 BAZ1BQ9UIG0 1483 aaKnown RBP38.53■■■■□ 3.76
LRWD1-204ENST00000468175 MROH2BQ7Z745 1585 aa38.48■■■■□ 3.75
LRWD1-204ENST00000468175 ERCC6Q03468 1493 aa38.36■■■■□ 3.73
LRWD1-204ENST00000468175 CUX2O14529 1486 aa38.23■■■■□ 3.71
LRWD1-204ENST00000468175 NESP48681 1621 aa38.23■■■■□ 3.71
LRWD1-204ENST00000468175 LAMC3Q9Y6N6 1575 aa38.03■■■■□ 3.68
LRWD1-204ENST00000468175 DNAJC5Q9H3Z4 198 aa37.97■■■■□ 3.67
LRWD1-204ENST00000468175 WIZO95785 1651 aa37.96■■■■□ 3.67
LRWD1-204ENST00000468175 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
LRWD1-204ENST00000468175 CADPSQ9ULU8 1353 aa37.85■■■■□ 3.65
LRWD1-204ENST00000468175 RSF1Q96T23 1441 aaPredicted RBP37.83■■■■□ 3.65
LRWD1-204ENST00000468175 THOC2Q8NI27 1593 aaKnown RBP37.76■■■■□ 3.63
LRWD1-204ENST00000468175 KIF21AQ7Z4S6 1674 aa37.66■■■■□ 3.62
LRWD1-204ENST00000468175 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
LRWD1-204ENST00000468175 MRC2Q9UBG0 1479 aa37.48■■■■□ 3.59
LRWD1-204ENST00000468175 CFTRP13569 1480 aa37.45■■■■□ 3.59
LRWD1-204ENST00000468175 CEP164Q9UPV0 1460 aa37.39■■■■□ 3.58
LRWD1-204ENST00000468175 FANCD2Q9BXW9 1451 aa37.37■■■■□ 3.57
LRWD1-204ENST00000468175 WDR62O43379 1518 aa37.36■■■■□ 3.57
LRWD1-204ENST00000468175 CCDC88BA6NC98 1476 aa37.17■■■■□ 3.54
LRWD1-204ENST00000468175 URB2Q14146 1524 aaKnown RBP37.02■■■■□ 3.52
LRWD1-204ENST00000468175 PRDM2Q13029 1718 aa36.92■■■■□ 3.5
LRWD1-204ENST00000468175 ABCC8Q09428 1581 aa36.69■■■■□ 3.46
LRWD1-204ENST00000468175 TOPBP1Q92547 1522 aa36.69■■■■□ 3.46
LRWD1-204ENST00000468175 IFT140Q96RY7 1462 aa36.65■■■■□ 3.46
LRWD1-204ENST00000468175 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
LRWD1-204ENST00000468175 DNMBPQ6XZF7 1577 aa36.55■■■■□ 3.44
LRWD1-204ENST00000468175 ZNF608Q9ULD9 1512 aaPredicted RBP36.52■■■■□ 3.44
LRWD1-204ENST00000468175 SUPT5HO00267 1087 aaKnown RBP36.35■■■■□ 3.41
LRWD1-204ENST00000468175 TRIM41Q8WV44 630 aa36.35■■■■□ 3.41
LRWD1-204ENST00000468175 POLA1P09884 1462 aaPredicted RBP36.33■■■■□ 3.41
LRWD1-204ENST00000468175 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
LRWD1-204ENST00000468175 EIF4G3O43432 1585 aaKnown RBP36.28■■■■□ 3.4
LRWD1-204ENST00000468175 AQRO60306 1485 aaKnown RBP eCLIP36.25■■■■□ 3.395e-6■■■■■ 28
LRWD1-204ENST00000468175 SOGA1O94964 1423 aa36.21■■■■□ 3.39
LRWD1-204ENST00000468175 RAD54L2Q9Y4B4 1467 aa36.18■■■■□ 3.38
LRWD1-204ENST00000468175 FGD5Q6ZNL6 1462 aa36.13■■■■□ 3.37
LRWD1-204ENST00000468175 CUX1P39880 1505 aa36.13■■■■□ 3.37
LRWD1-204ENST00000468175 TDRD9Q8NDG6 1382 aaKnown RBP36.09■■■■□ 3.37
LRWD1-204ENST00000468175 WDR97A6NE52 1622 aa36■■■■□ 3.35
LRWD1-204ENST00000468175 FBLN2P98095 1184 aa35.98■■■■□ 3.35
LRWD1-204ENST00000468175 RIMBP3CA6NJZ7 1639 aa35.94■■■■□ 3.34
LRWD1-204ENST00000468175 RIMBP3BA6NNM3 1639 aa35.94■■■■□ 3.34
LRWD1-204ENST00000468175 RIMBP3Q9UFD9 1639 aa35.94■■■■□ 3.34
LRWD1-204ENST00000468175 CHD1O14646 1710 aa35.91■■■■□ 3.34
LRWD1-204ENST00000468175 ARHGEF11O15085 1522 aa35.9■■■■□ 3.34
LRWD1-204ENST00000468175 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
LRWD1-204ENST00000468175 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
LRWD1-204ENST00000468175 MAGI1Q96QZ7 1491 aaPredicted RBP35.82■■■■□ 3.32
LRWD1-204ENST00000468175 CHMP7Q8WUX9 453 aaPredicted RBP35.8■■■■□ 3.32
LRWD1-204ENST00000468175 ABCA10Q8WWZ4 1543 aa35.77■■■■□ 3.32
LRWD1-204ENST00000468175 GAPVD1Q14C86 1478 aa35.76■■■■□ 3.32
LRWD1-204ENST00000468175 SYNJ2O15056 1496 aa35.7■■■■□ 3.31
LRWD1-204ENST00000468175 WRNQ14191 1432 aaPredicted RBP eCLIP35.7■■■■□ 3.31
LRWD1-204ENST00000468175 CYB5RLQ6IPT4 315 aa35.69■■■■□ 3.3
LRWD1-204ENST00000468175 TOP2BQ02880 1626 aa35.61■■■■□ 3.29
LRWD1-204ENST00000468175 ABCA5Q8WWZ7 1642 aa35.61■■■■□ 3.29
LRWD1-204ENST00000468175 SYNJ1O43426 1573 aa35.61■■■■□ 3.29
LRWD1-204ENST00000468175 CLASP1Q7Z460 1538 aa35.6■■■■□ 3.29
LRWD1-204ENST00000468175 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
LRWD1-204ENST00000468175 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
LRWD1-204ENST00000468175 ARAP1Q96P48 1450 aa35.57■■■■□ 3.28
LRWD1-204ENST00000468175 GRIN2AQ12879 1464 aa35.37■■■■□ 3.25
LRWD1-204ENST00000468175 FHAD1B1AJZ9 1412 aa35.33■■■■□ 3.25
LRWD1-204ENST00000468175 ADAMTS12P58397 1594 aa35.33■■■■□ 3.25
LRWD1-204ENST00000468175 ERICH3Q5RHP9 1530 aa35.32■■■■□ 3.24
LRWD1-204ENST00000468175 NUP160Q12769 1436 aa35.27■■■■□ 3.24
LRWD1-204ENST00000468175 TRHP20396 242 aaPredicted RBP35.2■■■■□ 3.23
LRWD1-204ENST00000468175 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
LRWD1-204ENST00000468175 ERCC6L2Q5T890 1561 aa35.03■■■■□ 3.2
LRWD1-204ENST00000468175 KIF27Q86VH2 1401 aa35.01■■■■□ 3.2
LRWD1-204ENST00000468175 SHROOM2Q13796 1616 aa35.01■■■■□ 3.19
LRWD1-204ENST00000468175 IGF1RP08069 1367 aa34.99■■■■□ 3.19
LRWD1-204ENST00000468175 JPH4Q96JJ6 628 aa34.96■■■■□ 3.19
LRWD1-204ENST00000468175 PRG4Q92954 1404 aaPredicted RBP34.9■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms