RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 NISCHQ9Y2I1 1504 aa34.83■■■■□ 3.17
RPP40-204ENST00000468105 ABCC9O60706 1549 aa31.89■■■□□ 2.7
RPP40-204ENST00000468105 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
RPP40-204ENST00000468105 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
RPP40-204ENST00000468105 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.39
RPP40-204ENST00000468105 NACADO15069 1562 aa29.71■■■□□ 2.35
RPP40-204ENST00000468105 PABPN1Q86U42 306 aaKnown RBP eCLIP29.68■■■□□ 2.34
RPP40-204ENST00000468105 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
RPP40-204ENST00000468105 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.31
RPP40-204ENST00000468105 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
RPP40-204ENST00000468105 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
RPP40-204ENST00000468105 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
RPP40-204ENST00000468105 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
RPP40-204ENST00000468105 CECR2Q9BXF3 1484 aa28.72■■■□□ 2.19
RPP40-204ENST00000468105 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
RPP40-204ENST00000468105 SCRIBQ14160 1630 aa28.64■■■□□ 2.18
RPP40-204ENST00000468105 SHROOM4Q9ULL8 1493 aa28.64■■■□□ 2.17
RPP40-204ENST00000468105 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
RPP40-204ENST00000468105 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
RPP40-204ENST00000468105 NCAPD3P42695 1498 aa27.51■■■□□ 2
RPP40-204ENST00000468105 CUX2O14529 1486 aa27.51■■□□□ 1.99
RPP40-204ENST00000468105 ERCC6Q03468 1493 aa27.41■■□□□ 1.98
RPP40-204ENST00000468105 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
RPP40-204ENST00000468105 NESP48681 1621 aa27.35■■□□□ 1.97
RPP40-204ENST00000468105 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
RPP40-204ENST00000468105 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
RPP40-204ENST00000468105 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
RPP40-204ENST00000468105 THOC2Q8NI27 1593 aaKnown RBP27.07■■□□□ 1.92
RPP40-204ENST00000468105 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
RPP40-204ENST00000468105 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
RPP40-204ENST00000468105 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
RPP40-204ENST00000468105 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
RPP40-204ENST00000468105 KIF21AQ7Z4S6 1674 aa26.9■■□□□ 1.9
RPP40-204ENST00000468105 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
RPP40-204ENST00000468105 PDS5BQ9NTI5 1447 aa26.71■■□□□ 1.87
RPP40-204ENST00000468105 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
RPP40-204ENST00000468105 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
RPP40-204ENST00000468105 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
RPP40-204ENST00000468105 WIZO95785 1651 aa26.56■■□□□ 1.84
RPP40-204ENST00000468105 WDR62O43379 1518 aa26.55■■□□□ 1.84
RPP40-204ENST00000468105 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
RPP40-204ENST00000468105 FANCD2Q9BXW9 1451 aa26.35■■□□□ 1.81
RPP40-204ENST00000468105 CFTRP13569 1480 aa26.27■■□□□ 1.8
RPP40-204ENST00000468105 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
RPP40-204ENST00000468105 OSCARQ8IYS5 282 aa26.21■■□□□ 1.79
RPP40-204ENST00000468105 RSF1Q96T23 1441 aaPredicted RBP26.17■■□□□ 1.78
RPP40-204ENST00000468105 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
RPP40-204ENST00000468105 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
RPP40-204ENST00000468105 RIMBP3CA6NJZ7 1639 aa26.01■■□□□ 1.75
RPP40-204ENST00000468105 RIMBP3BA6NNM3 1639 aa26.01■■□□□ 1.75
RPP40-204ENST00000468105 RIMBP3Q9UFD9 1639 aa26.01■■□□□ 1.75
RPP40-204ENST00000468105 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
RPP40-204ENST00000468105 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
RPP40-204ENST00000468105 ARHGEF11O15085 1522 aa25.87■■□□□ 1.73
RPP40-204ENST00000468105 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
RPP40-204ENST00000468105 TOPBP1Q92547 1522 aa25.83■■□□□ 1.72
RPP40-204ENST00000468105 EIF4G3O43432 1585 aaKnown RBP25.76■■□□□ 1.71
RPP40-204ENST00000468105 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
RPP40-204ENST00000468105 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.7
RPP40-204ENST00000468105 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
RPP40-204ENST00000468105 CHD1O14646 1710 aa25.66■■□□□ 1.7
RPP40-204ENST00000468105 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
RPP40-204ENST00000468105 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
RPP40-204ENST00000468105 ABCC8Q09428 1581 aa25.57■■□□□ 1.68
RPP40-204ENST00000468105 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
RPP40-204ENST00000468105 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
RPP40-204ENST00000468105 FBLN2P98095 1184 aa25.5■■□□□ 1.67
RPP40-204ENST00000468105 TRHP20396 242 aaPredicted RBP25.47■■□□□ 1.67
RPP40-204ENST00000468105 TDRD9Q8NDG6 1382 aaKnown RBP25.46■■□□□ 1.67
RPP40-204ENST00000468105 SOGA1O94964 1423 aa25.38■■□□□ 1.65
RPP40-204ENST00000468105 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
RPP40-204ENST00000468105 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
RPP40-204ENST00000468105 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
RPP40-204ENST00000468105 CUX1P39880 1505 aa25.28■■□□□ 1.64
RPP40-204ENST00000468105 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
RPP40-204ENST00000468105 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
RPP40-204ENST00000468105 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
RPP40-204ENST00000468105 GRIN2BQ13224 1484 aa25.17■■□□□ 1.62
RPP40-204ENST00000468105 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
RPP40-204ENST00000468105 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
RPP40-204ENST00000468105 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
RPP40-204ENST00000468105 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.6
RPP40-204ENST00000468105 ERCC6L2Q5T890 1561 aa25.07■■□□□ 1.6
RPP40-204ENST00000468105 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
RPP40-204ENST00000468105 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
RPP40-204ENST00000468105 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
RPP40-204ENST00000468105 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
RPP40-204ENST00000468105 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
RPP40-204ENST00000468105 NUP160Q12769 1436 aa24.85■■□□□ 1.57
RPP40-204ENST00000468105 ADAMTS12P58397 1594 aa24.84■■□□□ 1.57
RPP40-204ENST00000468105 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
RPP40-204ENST00000468105 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
RPP40-204ENST00000468105 KIF13AQ9H1H9 1805 aa24.72■■□□□ 1.55
RPP40-204ENST00000468105 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
RPP40-204ENST00000468105 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
RPP40-204ENST00000468105 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
RPP40-204ENST00000468105 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
RPP40-204ENST00000468105 PRG4Q92954 1404 aaPredicted RBP24.62■■□□□ 1.53
RPP40-204ENST00000468105 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
RPP40-204ENST00000468105 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms