RNA–Protein interactions for RNA: ENST00000467949.1

TSC2-211, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-211ENST00000467949 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
TSC2-211ENST00000467949 ABCC9O60706 1549 aa31.86■■■□□ 2.69
TSC2-211ENST00000467949 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
TSC2-211ENST00000467949 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
TSC2-211ENST00000467949 DNAJC5BQ9UF47 199 aa30.02■■■□□ 2.4
TSC2-211ENST00000467949 NACADO15069 1562 aa29.92■■■□□ 2.38
TSC2-211ENST00000467949 UNC13AQ9UPW8 1703 aa29.71■■■□□ 2.35
TSC2-211ENST00000467949 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
TSC2-211ENST00000467949 PABPN1Q86U42 306 aaKnown RBP eCLIP29.54■■■□□ 2.32
TSC2-211ENST00000467949 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
TSC2-211ENST00000467949 MYO15BQ96JP2 1530 aa29.38■■■□□ 2.29
TSC2-211ENST00000467949 ZCCHC6Q5VYS8 1495 aaKnown RBP29.06■■■□□ 2.24
TSC2-211ENST00000467949 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
TSC2-211ENST00000467949 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
TSC2-211ENST00000467949 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
TSC2-211ENST00000467949 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
TSC2-211ENST00000467949 CECR2Q9BXF3 1484 aa28.7■■■□□ 2.18
TSC2-211ENST00000467949 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
TSC2-211ENST00000467949 DNAJC5Q9H3Z4 198 aa27.69■■■□□ 2.02
TSC2-211ENST00000467949 NCAPD3P42695 1498 aa27.57■■■□□ 2
TSC2-211ENST00000467949 CUX2O14529 1486 aa27.53■■■□□ 2
TSC2-211ENST00000467949 ERCC6Q03468 1493 aa27.51■■■□□ 2
TSC2-211ENST00000467949 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
TSC2-211ENST00000467949 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
TSC2-211ENST00000467949 HMGXB3Q12766 1538 aa27.44■■□□□ 1.98
TSC2-211ENST00000467949 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
TSC2-211ENST00000467949 NESP48681 1621 aa27.33■■□□□ 1.97
TSC2-211ENST00000467949 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
TSC2-211ENST00000467949 BAZ1BQ9UIG0 1483 aaKnown RBP27.24■■□□□ 1.95
TSC2-211ENST00000467949 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
TSC2-211ENST00000467949 THOC2Q8NI27 1593 aaKnown RBP27.17■■□□□ 1.94
TSC2-211ENST00000467949 LAMC3Q9Y6N6 1575 aa27.07■■□□□ 1.92
TSC2-211ENST00000467949 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
TSC2-211ENST00000467949 MROH2BQ7Z745 1585 aa27.06■■□□□ 1.92
TSC2-211ENST00000467949 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
TSC2-211ENST00000467949 WIZO95785 1651 aa26.79■■□□□ 1.88
TSC2-211ENST00000467949 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
TSC2-211ENST00000467949 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
TSC2-211ENST00000467949 WDR62O43379 1518 aa26.68■■□□□ 1.86
TSC2-211ENST00000467949 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
TSC2-211ENST00000467949 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
TSC2-211ENST00000467949 TRIM41Q8WV44 630 aa26.44■■□□□ 1.82
TSC2-211ENST00000467949 CFTRP13569 1480 aa26.39■■□□□ 1.82
TSC2-211ENST00000467949 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
TSC2-211ENST00000467949 RSF1Q96T23 1441 aaPredicted RBP26.34■■□□□ 1.81
TSC2-211ENST00000467949 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
TSC2-211ENST00000467949 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
TSC2-211ENST00000467949 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
TSC2-211ENST00000467949 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
TSC2-211ENST00000467949 ZNF608Q9ULD9 1512 aaPredicted RBP26.02■■□□□ 1.76
TSC2-211ENST00000467949 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
TSC2-211ENST00000467949 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
TSC2-211ENST00000467949 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
TSC2-211ENST00000467949 IFT140Q96RY7 1462 aa25.98■■□□□ 1.75
TSC2-211ENST00000467949 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
TSC2-211ENST00000467949 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
TSC2-211ENST00000467949 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
TSC2-211ENST00000467949 ARHGEF11O15085 1522 aa25.86■■□□□ 1.73
TSC2-211ENST00000467949 CHD1O14646 1710 aa25.85■■□□□ 1.73
TSC2-211ENST00000467949 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
TSC2-211ENST00000467949 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
TSC2-211ENST00000467949 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.713e-6■■■■■ 26.8
TSC2-211ENST00000467949 POLA1P09884 1462 aaPredicted RBP25.68■■□□□ 1.7
TSC2-211ENST00000467949 ARAP1Q96P48 1450 aa25.6■■□□□ 1.69
TSC2-211ENST00000467949 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
TSC2-211ENST00000467949 CYB5RLQ6IPT4 315 aa25.55■■□□□ 1.68
TSC2-211ENST00000467949 FBLN2P98095 1184 aa25.53■■□□□ 1.68
TSC2-211ENST00000467949 FGD5Q6ZNL6 1462 aa25.5■■□□□ 1.67
TSC2-211ENST00000467949 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
TSC2-211ENST00000467949 SOGA1O94964 1423 aa25.48■■□□□ 1.67
TSC2-211ENST00000467949 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
TSC2-211ENST00000467949 WDR97A6NE52 1622 aa25.48■■□□□ 1.67
TSC2-211ENST00000467949 CUX1P39880 1505 aa25.45■■□□□ 1.66
TSC2-211ENST00000467949 CLASP1Q7Z460 1538 aa25.45■■□□□ 1.66
TSC2-211ENST00000467949 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
TSC2-211ENST00000467949 PBRM1Q86U86 1689 aa25.39■■□□□ 1.65
TSC2-211ENST00000467949 MAGI1Q96QZ7 1491 aaPredicted RBP25.37■■□□□ 1.65
TSC2-211ENST00000467949 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
TSC2-211ENST00000467949 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
TSC2-211ENST00000467949 SYNJ2O15056 1496 aa25.29■■□□□ 1.64
TSC2-211ENST00000467949 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
TSC2-211ENST00000467949 ABCA5Q8WWZ7 1642 aa25.24■■□□□ 1.63
TSC2-211ENST00000467949 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
TSC2-211ENST00000467949 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
TSC2-211ENST00000467949 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
TSC2-211ENST00000467949 ERCC6L2Q5T890 1561 aa25.06■■□□□ 1.6
TSC2-211ENST00000467949 GRIN2AQ12879 1464 aa25.03■■□□□ 1.6
TSC2-211ENST00000467949 BIVM-ERCC5R4GMW8 1640 aa25.03■■□□□ 1.6
TSC2-211ENST00000467949 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
TSC2-211ENST00000467949 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
TSC2-211ENST00000467949 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.59
TSC2-211ENST00000467949 NUP160Q12769 1436 aa24.95■■□□□ 1.58
TSC2-211ENST00000467949 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
TSC2-211ENST00000467949 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
TSC2-211ENST00000467949 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
TSC2-211ENST00000467949 ERICH3Q5RHP9 1530 aa24.85■■□□□ 1.57
TSC2-211ENST00000467949 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
TSC2-211ENST00000467949 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
TSC2-211ENST00000467949 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
TSC2-211ENST00000467949 PRG4Q92954 1404 aaPredicted RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms