RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 NISCHQ9Y2I1 1504 aa47.49■■■■■ 5.19
COL1A2-204ENST00000467931 ABCC9O60706 1549 aa42.73■■■■■ 4.43
COL1A2-204ENST00000467931 CCDC180Q9P1Z9 1646 aa42.73■■■■■ 4.43
COL1A2-204ENST00000467931 RB1CC1Q8TDY2 1594 aa40.67■■■■■ 4.1
COL1A2-204ENST00000467931 NACADO15069 1562 aa40.33■■■■■ 4.05
COL1A2-204ENST00000467931 DCAF8L2P0C7V8 631 aa40.18■■■■■ 4.02
COL1A2-204ENST00000467931 DNAJC5BQ9UF47 199 aa39.97■■■■□ 3.99
COL1A2-204ENST00000467931 UNC13AQ9UPW8 1703 aa39.86■■■■□ 3.97
COL1A2-204ENST00000467931 PABPN1Q86U42 306 aaKnown RBP eCLIP39.73■■■■□ 3.95
COL1A2-204ENST00000467931 MYO15BQ96JP2 1530 aa39.68■■■■□ 3.94
COL1A2-204ENST00000467931 BICRAQ9NZM4 1560 aa39.42■■■■□ 3.9
COL1A2-204ENST00000467931 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
COL1A2-204ENST00000467931 DCAF1Q9Y4B6 1507 aa39.19■■■■□ 3.86
COL1A2-204ENST00000467931 SCRIBQ14160 1630 aa38.97■■■■□ 3.83
COL1A2-204ENST00000467931 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
COL1A2-204ENST00000467931 CC2D2AQ9P2K1 1620 aa38.61■■■■□ 3.77
COL1A2-204ENST00000467931 EIF4G1Q04637 1599 aaKnown RBP38.49■■■■□ 3.75
COL1A2-204ENST00000467931 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
COL1A2-204ENST00000467931 NCAPD3P42695 1498 aa37.16■■■■□ 3.54
COL1A2-204ENST00000467931 SMARCA4P51532 1647 aa37.12■■■■□ 3.53
COL1A2-204ENST00000467931 ATAD2BQ9ULI0 1458 aa37.08■■■■□ 3.53
COL1A2-204ENST00000467931 SMARCA2P51531 1590 aa37.04■■■■□ 3.52
COL1A2-204ENST00000467931 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
COL1A2-204ENST00000467931 ERCC6Q03468 1493 aa36.94■■■■□ 3.5
COL1A2-204ENST00000467931 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
COL1A2-204ENST00000467931 CUX2O14529 1486 aa36.8■■■■□ 3.48
COL1A2-204ENST00000467931 BAZ1BQ9UIG0 1483 aaKnown RBP36.8■■■■□ 3.48
COL1A2-204ENST00000467931 DNAJC5Q9H3Z4 198 aa36.74■■■■□ 3.47
COL1A2-204ENST00000467931 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
COL1A2-204ENST00000467931 NESP48681 1621 aa36.68■■■■□ 3.46
COL1A2-204ENST00000467931 MROH2BQ7Z745 1585 aa36.61■■■■□ 3.45
COL1A2-204ENST00000467931 LAMC3Q9Y6N6 1575 aa36.44■■■■□ 3.42
COL1A2-204ENST00000467931 THOC2Q8NI27 1593 aaKnown RBP36.35■■■■□ 3.41
COL1A2-204ENST00000467931 KIF21AQ7Z4S6 1674 aa36.32■■■■□ 3.41
COL1A2-204ENST00000467931 WIZO95785 1651 aa36.25■■■■□ 3.39
COL1A2-204ENST00000467931 PDS5BQ9NTI5 1447 aa36.18■■■■□ 3.38
COL1A2-204ENST00000467931 CADPSQ9ULU8 1353 aa36.04■■■■□ 3.36
COL1A2-204ENST00000467931 MRC2Q9UBG0 1479 aa35.9■■■■□ 3.34
COL1A2-204ENST00000467931 WDR62O43379 1518 aa35.8■■■■□ 3.32
COL1A2-204ENST00000467931 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
COL1A2-204ENST00000467931 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
COL1A2-204ENST00000467931 TOP2AP11388 1531 aaKnown RBP35.74■■■■□ 3.31
COL1A2-204ENST00000467931 FANCD2Q9BXW9 1451 aa35.71■■■■□ 3.31
COL1A2-204ENST00000467931 CFTRP13569 1480 aa35.63■■■■□ 3.29
COL1A2-204ENST00000467931 PRDM2Q13029 1718 aa35.51■■■■□ 3.27
COL1A2-204ENST00000467931 URB2Q14146 1524 aaKnown RBP35.4■■■■□ 3.26
COL1A2-204ENST00000467931 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
COL1A2-204ENST00000467931 TRIM41Q8WV44 630 aa35.26■■■■□ 3.24
COL1A2-204ENST00000467931 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
COL1A2-204ENST00000467931 TOPBP1Q92547 1522 aa35.02■■■■□ 3.2
COL1A2-204ENST00000467931 IFT140Q96RY7 1462 aa35.02■■■■□ 3.2
COL1A2-204ENST00000467931 ZNF608Q9ULD9 1512 aaPredicted RBP34.97■■■■□ 3.19
COL1A2-204ENST00000467931 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
COL1A2-204ENST00000467931 DNMBPQ6XZF7 1577 aa34.92■■■■□ 3.18
COL1A2-204ENST00000467931 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
COL1A2-204ENST00000467931 RIMBP3CA6NJZ7 1639 aa34.74■■■■□ 3.15
COL1A2-204ENST00000467931 RIMBP3BA6NNM3 1639 aa34.74■■■■□ 3.15
COL1A2-204ENST00000467931 RIMBP3Q9UFD9 1639 aa34.74■■■■□ 3.15
COL1A2-204ENST00000467931 TARBP1Q13395 1621 aaKnown RBP34.73■■■■□ 3.15
COL1A2-204ENST00000467931 CHD1O14646 1710 aa34.67■■■■□ 3.14
COL1A2-204ENST00000467931 POLA1P09884 1462 aaPredicted RBP34.65■■■■□ 3.14
COL1A2-204ENST00000467931 AQRO60306 1485 aaKnown RBP eCLIP34.65■■■■□ 3.14
COL1A2-204ENST00000467931 ARHGEF11O15085 1522 aa34.58■■■■□ 3.13
COL1A2-204ENST00000467931 RAD54L2Q9Y4B4 1467 aa34.53■■■■□ 3.12
COL1A2-204ENST00000467931 SOGA1O94964 1423 aa34.48■■■■□ 3.11
COL1A2-204ENST00000467931 FBLN2P98095 1184 aa34.48■■■■□ 3.11
COL1A2-204ENST00000467931 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
COL1A2-204ENST00000467931 TDRD9Q8NDG6 1382 aaKnown RBP34.42■■■■□ 3.1
COL1A2-204ENST00000467931 CUX1P39880 1505 aa34.4■■■■□ 3.1
COL1A2-204ENST00000467931 WDR97A6NE52 1622 aa34.37■■■■□ 3.09
COL1A2-204ENST00000467931 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
COL1A2-204ENST00000467931 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
COL1A2-204ENST00000467931 SUPT5HO00267 1087 aaKnown RBP34.27■■■■□ 3.08
COL1A2-204ENST00000467931 ARAP1Q96P48 1450 aa34.22■■■■□ 3.07
COL1A2-204ENST00000467931 PBRM1Q86U86 1689 aa34.22■■■■□ 3.07
COL1A2-204ENST00000467931 MAGI1Q96QZ7 1491 aaPredicted RBP34.21■■■■□ 3.07
COL1A2-204ENST00000467931 GRIN2BQ13224 1484 aa34.2■■■■□ 3.07
COL1A2-204ENST00000467931 CHMP7Q8WUX9 453 aaPredicted RBP34.18■■■■□ 3.06
COL1A2-204ENST00000467931 SYNJ1O43426 1573 aa34.18■■■■□ 3.06
COL1A2-204ENST00000467931 CLASP1Q7Z460 1538 aa34.14■■■■□ 3.06
COL1A2-204ENST00000467931 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
COL1A2-204ENST00000467931 GAPVD1Q14C86 1478 aa34.08■■■■□ 3.05
COL1A2-204ENST00000467931 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
COL1A2-204ENST00000467931 ABCA10Q8WWZ4 1543 aa34.03■■■■□ 3.04
COL1A2-204ENST00000467931 TRHP20396 242 aaPredicted RBP34■■■■□ 3.03
COL1A2-204ENST00000467931 BIVM-ERCC5R4GMW8 1640 aa33.91■■■■□ 3.02
COL1A2-204ENST00000467931 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
COL1A2-204ENST00000467931 TOP2BQ02880 1626 aa33.87■■■■□ 3.01
COL1A2-204ENST00000467931 ADAMTS12P58397 1594 aa33.8■■■■□ 3
COL1A2-204ENST00000467931 GRIN2AQ12879 1464 aa33.77■■■■□ 3
COL1A2-204ENST00000467931 CEP170Q5SW79 1584 aa33.68■■■□□ 2.98
COL1A2-204ENST00000467931 FHAD1B1AJZ9 1412 aa33.63■■■□□ 2.97
COL1A2-204ENST00000467931 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
COL1A2-204ENST00000467931 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
COL1A2-204ENST00000467931 NUP160Q12769 1436 aa33.61■■■□□ 2.97
COL1A2-204ENST00000467931 SHROOM2Q13796 1616 aa33.53■■■□□ 2.96
COL1A2-204ENST00000467931 PRG4Q92954 1404 aaPredicted RBP33.34■■■□□ 2.93
COL1A2-204ENST00000467931 RUSC2Q8N2Y8 1516 aa33.33■■■□□ 2.93
COL1A2-204ENST00000467931 JPH4Q96JJ6 628 aa33.26■■■□□ 2.91
COL1A2-204ENST00000467931 CUL7Q14999 1698 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 265.5 ms