RNA–Protein interactions for RNA: ENST00000467749.1

C4A-248, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-248ENST00000467749 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
C4A-248ENST00000467749 ABCC9O60706 1549 aa18.88■□□□□ 0.61
C4A-248ENST00000467749 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
C4A-248ENST00000467749 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
C4A-248ENST00000467749 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
C4A-248ENST00000467749 NACADO15069 1562 aa17.62■□□□□ 0.41
C4A-248ENST00000467749 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
C4A-248ENST00000467749 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
C4A-248ENST00000467749 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
C4A-248ENST00000467749 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
C4A-248ENST00000467749 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
C4A-248ENST00000467749 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
C4A-248ENST00000467749 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
C4A-248ENST00000467749 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
C4A-248ENST00000467749 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
C4A-248ENST00000467749 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
C4A-248ENST00000467749 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
C4A-248ENST00000467749 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
C4A-248ENST00000467749 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
C4A-248ENST00000467749 CUX2O14529 1486 aa16.48■□□□□ 0.23
C4A-248ENST00000467749 ERCC6Q03468 1493 aa16.35■□□□□ 0.21
C4A-248ENST00000467749 NCAPD3P42695 1498 aa16.24■□□□□ 0.19
C4A-248ENST00000467749 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
C4A-248ENST00000467749 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
C4A-248ENST00000467749 NESP48681 1621 aa16.1■□□□□ 0.17
C4A-248ENST00000467749 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
C4A-248ENST00000467749 THOC2Q8NI27 1593 aaKnown RBP16.08■□□□□ 0.16
C4A-248ENST00000467749 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
C4A-248ENST00000467749 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
C4A-248ENST00000467749 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
C4A-248ENST00000467749 BAZ1BQ9UIG0 1483 aaKnown RBP15.96■□□□□ 0.14
C4A-248ENST00000467749 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
C4A-248ENST00000467749 PEG3Q9GZU2 1588 aa15.9■□□□□ 0.14
C4A-248ENST00000467749 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
C4A-248ENST00000467749 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
C4A-248ENST00000467749 MRC2Q9UBG0 1479 aa15.76■□□□□ 0.11
C4A-248ENST00000467749 WDR62O43379 1518 aa15.75■□□□□ 0.11
C4A-248ENST00000467749 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.11
C4A-248ENST00000467749 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
C4A-248ENST00000467749 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
C4A-248ENST00000467749 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
C4A-248ENST00000467749 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
C4A-248ENST00000467749 WIZO95785 1651 aa15.53■□□□□ 0.08
C4A-248ENST00000467749 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
C4A-248ENST00000467749 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
C4A-248ENST00000467749 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
C4A-248ENST00000467749 CFTRP13569 1480 aa15.46■□□□□ 0.06
C4A-248ENST00000467749 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
C4A-248ENST00000467749 ARHGEF11O15085 1522 aa15.4■□□□□ 0.06
C4A-248ENST00000467749 PRDM2Q13029 1718 aa15.38■□□□□ 0.05
C4A-248ENST00000467749 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
C4A-248ENST00000467749 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
C4A-248ENST00000467749 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
C4A-248ENST00000467749 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
C4A-248ENST00000467749 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
C4A-248ENST00000467749 CHD1O14646 1710 aa15.25■□□□□ 0.03
C4A-248ENST00000467749 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
C4A-248ENST00000467749 RSF1Q96T23 1441 aaPredicted RBP15.22■□□□□ 0.03
C4A-248ENST00000467749 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
C4A-248ENST00000467749 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
C4A-248ENST00000467749 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
C4A-248ENST00000467749 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
C4A-248ENST00000467749 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
C4A-248ENST00000467749 AEBP2Q6ZN18 517 aaPredicted RBP15.11■□□□□ 0.01
C4A-248ENST00000467749 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
C4A-248ENST00000467749 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
C4A-248ENST00000467749 FBLN2P98095 1184 aa15.07■□□□□ 0
C4A-248ENST00000467749 CLASP1Q7Z460 1538 aa15.03■□□□□ -0
C4A-248ENST00000467749 POLA1P09884 1462 aaPredicted RBP15.02■□□□□ -0
C4A-248ENST00000467749 SYNJ1O43426 1573 aa14.99□□□□□ -0.01
C4A-248ENST00000467749 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
C4A-248ENST00000467749 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
C4A-248ENST00000467749 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
C4A-248ENST00000467749 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
C4A-248ENST00000467749 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
C4A-248ENST00000467749 SOGA1O94964 1423 aa14.92□□□□□ -0.02
C4A-248ENST00000467749 CHMP7Q8WUX9 453 aaPredicted RBP14.9□□□□□ -0.02
C4A-248ENST00000467749 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
C4A-248ENST00000467749 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
C4A-248ENST00000467749 GRIN2BQ13224 1484 aa14.87□□□□□ -0.03
C4A-248ENST00000467749 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
C4A-248ENST00000467749 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
C4A-248ENST00000467749 CUX1P39880 1505 aa14.79□□□□□ -0.04
C4A-248ENST00000467749 KIF13AQ9H1H9 1805 aa14.73□□□□□ -0.05
C4A-248ENST00000467749 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
C4A-248ENST00000467749 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
C4A-248ENST00000467749 CEP170Q5SW79 1584 aa14.7□□□□□ -0.06
C4A-248ENST00000467749 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
C4A-248ENST00000467749 GRIN2AQ12879 1464 aa14.68□□□□□ -0.06
C4A-248ENST00000467749 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
C4A-248ENST00000467749 NUP160Q12769 1436 aa14.65□□□□□ -0.06
C4A-248ENST00000467749 ADAMTS12P58397 1594 aa14.64□□□□□ -0.07
C4A-248ENST00000467749 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
C4A-248ENST00000467749 ABCC10Q5T3U5 1492 aa14.54□□□□□ -0.08
C4A-248ENST00000467749 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
C4A-248ENST00000467749 DIP2BQ9P265 1576 aa14.52□□□□□ -0.08
C4A-248ENST00000467749 MAPKBP1O60336 1514 aa14.52□□□□□ -0.08
C4A-248ENST00000467749 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.08
C4A-248ENST00000467749 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
C4A-248ENST00000467749 KDM6BO15054 1643 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms