RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-208ENST00000467722 NISCHQ9Y2I1 1504 aa61.31■■■■■ 7.41
SPECC1-208ENST00000467722 ABCC9O60706 1549 aa55.63■■■■■ 6.5
SPECC1-208ENST00000467722 CCDC180Q9P1Z9 1646 aa55.34■■■■■ 6.45
SPECC1-208ENST00000467722 RB1CC1Q8TDY2 1594 aa52.82■■■■■ 6.05
SPECC1-208ENST00000467722 DNAJC5BQ9UF47 199 aa52.58■■■■■ 6.01
SPECC1-208ENST00000467722 NACADO15069 1562 aa52.35■■■■■ 5.97
SPECC1-208ENST00000467722 UNC13AQ9UPW8 1703 aa51.77■■■■■ 5.88
SPECC1-208ENST00000467722 DCAF8L2P0C7V8 631 aa51.68■■■■■ 5.86
SPECC1-208ENST00000467722 PABPN1Q86U42 306 aaKnown RBP eCLIP51.62■■■■■ 5.85
SPECC1-208ENST00000467722 MYO15BQ96JP2 1530 aa51.51■■■■■ 5.84
SPECC1-208ENST00000467722 BICRAQ9NZM4 1560 aa51.36■■■■■ 5.81
SPECC1-208ENST00000467722 ZCCHC6Q5VYS8 1495 aaKnown RBP50.74■■■■■ 5.71
SPECC1-208ENST00000467722 DCAF1Q9Y4B6 1507 aa50.67■■■■■ 5.7
SPECC1-208ENST00000467722 SHROOM4Q9ULL8 1493 aa50.62■■■■■ 5.69
SPECC1-208ENST00000467722 CC2D2AQ9P2K1 1620 aa50.31■■■■■ 5.64
SPECC1-208ENST00000467722 SCRIBQ14160 1630 aa50.29■■■■■ 5.64
SPECC1-208ENST00000467722 CECR2Q9BXF3 1484 aa50.18■■■■■ 5.62
SPECC1-208ENST00000467722 EIF4G1Q04637 1599 aaKnown RBP50.09■■■■■ 5.61
SPECC1-208ENST00000467722 DNAJC5Q9H3Z4 198 aa48.63■■■■■ 5.38
SPECC1-208ENST00000467722 NCAPD3P42695 1498 aa48.3■■■■■ 5.32
SPECC1-208ENST00000467722 CUX2O14529 1486 aa48.21■■■■■ 5.31
SPECC1-208ENST00000467722 ATAD2BQ9ULI0 1458 aa48.08■■■■■ 5.29
SPECC1-208ENST00000467722 ERCC6Q03468 1493 aa48.05■■■■■ 5.28
SPECC1-208ENST00000467722 SMARCA4P51532 1647 aa47.97■■■■■ 5.27
SPECC1-208ENST00000467722 HMGXB3Q12766 1538 aa47.97■■■■■ 5.27
SPECC1-208ENST00000467722 SMARCA2P51531 1590 aa47.95■■■■■ 5.27
SPECC1-208ENST00000467722 NESP48681 1621 aa47.68■■■■■ 5.22
SPECC1-208ENST00000467722 BAZ1AQ9NRL2 1556 aaPredicted RBP47.63■■■■■ 5.22
SPECC1-208ENST00000467722 BAZ1BQ9UIG0 1483 aaKnown RBP47.58■■■■■ 5.21
SPECC1-208ENST00000467722 PEG3Q9GZU2 1588 aa47.55■■■■■ 5.2
SPECC1-208ENST00000467722 THOC2Q8NI27 1593 aaKnown RBP47.41■■■■■ 5.18
SPECC1-208ENST00000467722 LAMC3Q9Y6N6 1575 aa47.33■■■■■ 5.17
SPECC1-208ENST00000467722 MROH2BQ7Z745 1585 aa47.23■■■■■ 5.15
SPECC1-208ENST00000467722 KIF21AQ7Z4S6 1674 aa47.16■■■■■ 5.14
SPECC1-208ENST00000467722 PDS5BQ9NTI5 1447 aa46.98■■■■■ 5.11
SPECC1-208ENST00000467722 CADPSQ9ULU8 1353 aa46.76■■■■■ 5.08
SPECC1-208ENST00000467722 WIZO95785 1651 aa46.67■■■■■ 5.06
SPECC1-208ENST00000467722 MRC2Q9UBG0 1479 aa46.65■■■■■ 5.06
SPECC1-208ENST00000467722 WDR62O43379 1518 aa46.61■■■■■ 5.05
SPECC1-208ENST00000467722 CEP164Q9UPV0 1460 aa46.37■■■■■ 5.01
SPECC1-208ENST00000467722 FANCD2Q9BXW9 1451 aa46.26■■■■■ 5
SPECC1-208ENST00000467722 TRIM41Q8WV44 630 aa46.21■■■■■ 4.99
SPECC1-208ENST00000467722 CFTRP13569 1480 aa46.18■■■■■ 4.98
SPECC1-208ENST00000467722 TOP2AP11388 1531 aaKnown RBP46.04■■■■■ 4.96
SPECC1-208ENST00000467722 RSF1Q96T23 1441 aaPredicted RBP46.03■■■■■ 4.96
SPECC1-208ENST00000467722 URB2Q14146 1524 aaKnown RBP45.95■■■■■ 4.95
SPECC1-208ENST00000467722 PRDM2Q13029 1718 aa45.85■■■■■ 4.93
SPECC1-208ENST00000467722 OSCARQ8IYS5 282 aa45.78■■■■■ 4.92
SPECC1-208ENST00000467722 CCDC88BA6NC98 1476 aa45.47■■■■■ 4.87
SPECC1-208ENST00000467722 IFT140Q96RY7 1462 aa45.45■■■■■ 4.87
SPECC1-208ENST00000467722 ZNF608Q9ULD9 1512 aaPredicted RBP45.43■■■■■ 4.86
SPECC1-208ENST00000467722 RIMBP3CA6NJZ7 1639 aa45.41■■■■■ 4.86
SPECC1-208ENST00000467722 RIMBP3BA6NNM3 1639 aa45.41■■■■■ 4.86
SPECC1-208ENST00000467722 RIMBP3Q9UFD9 1639 aa45.41■■■■■ 4.86
SPECC1-208ENST00000467722 TOPBP1Q92547 1522 aa45.36■■■■■ 4.85
SPECC1-208ENST00000467722 EIF4G3O43432 1585 aaKnown RBP45.24■■■■■ 4.83
SPECC1-208ENST00000467722 ABCC8Q09428 1581 aa45.2■■■■■ 4.83
SPECC1-208ENST00000467722 ARHGEF11O15085 1522 aa45.19■■■■■ 4.82
SPECC1-208ENST00000467722 DNMBPQ6XZF7 1577 aa45.18■■■■■ 4.82
SPECC1-208ENST00000467722 TARBP1Q13395 1621 aaKnown RBP45.06■■■■■ 4.8
SPECC1-208ENST00000467722 CHD1O14646 1710 aa45.01■■■■■ 4.8
SPECC1-208ENST00000467722 AQRO60306 1485 aaKnown RBP eCLIP44.91■■■■■ 4.78
SPECC1-208ENST00000467722 POLA1P09884 1462 aaPredicted RBP44.86■■■■■ 4.77
SPECC1-208ENST00000467722 CYB5RLQ6IPT4 315 aa44.72■■■■■ 4.75
SPECC1-208ENST00000467722 ARAP1Q96P48 1450 aa44.72■■■■■ 4.75
SPECC1-208ENST00000467722 RAD54L2Q9Y4B4 1467 aa44.66■■■■■ 4.74
SPECC1-208ENST00000467722 FBLN2P98095 1184 aa44.59■■■■■ 4.73
SPECC1-208ENST00000467722 WDR97A6NE52 1622 aa44.58■■■■■ 4.73
SPECC1-208ENST00000467722 SOGA1O94964 1423 aa44.57■■■■■ 4.72
SPECC1-208ENST00000467722 TDRD9Q8NDG6 1382 aaKnown RBP44.54■■■■■ 4.72
SPECC1-208ENST00000467722 FGD5Q6ZNL6 1462 aa44.5■■■■■ 4.71
SPECC1-208ENST00000467722 SNAPC4Q5SXM2 1469 aa44.48■■■■■ 4.71
SPECC1-208ENST00000467722 CLASP1Q7Z460 1538 aa44.46■■■■■ 4.71
SPECC1-208ENST00000467722 CUX1P39880 1505 aa44.41■■■■■ 4.7
SPECC1-208ENST00000467722 MAGI1Q96QZ7 1491 aaPredicted RBP44.37■■■■■ 4.69
SPECC1-208ENST00000467722 TRHP20396 242 aaPredicted RBP44.35■■■■■ 4.69
SPECC1-208ENST00000467722 SYNJ1O43426 1573 aa44.35■■■■■ 4.69
SPECC1-208ENST00000467722 GRIN2BQ13224 1484 aa44.29■■■■■ 4.68
SPECC1-208ENST00000467722 CHMP7Q8WUX9 453 aaPredicted RBP44.22■■■■■ 4.67
SPECC1-208ENST00000467722 SYNJ2O15056 1496 aa44.21■■■■■ 4.67
SPECC1-208ENST00000467722 PBRM1Q86U86 1689 aa44.2■■■■■ 4.67
SPECC1-208ENST00000467722 GAPVD1Q14C86 1478 aa44.06■■■■■ 4.64
SPECC1-208ENST00000467722 ABCA5Q8WWZ7 1642 aa44.04■■■■■ 4.64
SPECC1-208ENST00000467722 ABCA10Q8WWZ4 1543 aa43.99■■■■■ 4.63
SPECC1-208ENST00000467722 GRIN2AQ12879 1464 aa43.75■■■■■ 4.59
SPECC1-208ENST00000467722 ADAMTS12P58397 1594 aa43.72■■■■■ 4.59
SPECC1-208ENST00000467722 ERCC6L2Q5T890 1561 aa43.7■■■■■ 4.59
SPECC1-208ENST00000467722 WRNQ14191 1432 aaPredicted RBP eCLIP43.65■■■■■ 4.58
SPECC1-208ENST00000467722 CEP170Q5SW79 1584 aa43.65■■■■■ 4.58
SPECC1-208ENST00000467722 BIVM-ERCC5R4GMW8 1640 aa43.64■■■■■ 4.58
SPECC1-208ENST00000467722 NUP160Q12769 1436 aa43.63■■■■■ 4.57
SPECC1-208ENST00000467722 TOP2BQ02880 1626 aa43.6■■■■■ 4.57
SPECC1-208ENST00000467722 SHROOM2Q13796 1616 aa43.57■■■■■ 4.57
SPECC1-208ENST00000467722 FHAD1B1AJZ9 1412 aa43.48■■■■■ 4.55
SPECC1-208ENST00000467722 SUPT5HO00267 1087 aaKnown RBP43.46■■■■■ 4.55
SPECC1-208ENST00000467722 ERICH3Q5RHP9 1530 aa43.44■■■■■ 4.54
SPECC1-208ENST00000467722 AEBP2Q6ZN18 517 aaPredicted RBP43.39■■■■■ 4.54
SPECC1-208ENST00000467722 KIF13AQ9H1H9 1805 aa43.28■■■■■ 4.52
SPECC1-208ENST00000467722 PRG4Q92954 1404 aaPredicted RBP43.17■■■■■ 4.5
SPECC1-208ENST00000467722 RUSC2Q8N2Y8 1516 aa43.13■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms