RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
NOD1-207ENST00000467706 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
NOD1-207ENST00000467706 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
NOD1-207ENST00000467706 ABCC9O60706 1549 aa23.55■■□□□ 1.36
NOD1-207ENST00000467706 DCAF1Q9Y4B6 1507 aa23.34■■□□□ 1.33
NOD1-207ENST00000467706 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
NOD1-207ENST00000467706 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
NOD1-207ENST00000467706 NACADO15069 1562 aa23.09■■□□□ 1.29
NOD1-207ENST00000467706 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
NOD1-207ENST00000467706 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
NOD1-207ENST00000467706 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
NOD1-207ENST00000467706 UNC13AQ9UPW8 1703 aa22.45■■□□□ 1.19
NOD1-207ENST00000467706 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
NOD1-207ENST00000467706 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
NOD1-207ENST00000467706 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
NOD1-207ENST00000467706 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
NOD1-207ENST00000467706 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
NOD1-207ENST00000467706 RSF1Q96T23 1441 aaPredicted RBP21.77■■□□□ 1.08
NOD1-207ENST00000467706 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
NOD1-207ENST00000467706 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
NOD1-207ENST00000467706 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
NOD1-207ENST00000467706 WIZO95785 1651 aa21.58■■□□□ 1.05
NOD1-207ENST00000467706 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
NOD1-207ENST00000467706 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
NOD1-207ENST00000467706 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
NOD1-207ENST00000467706 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
NOD1-207ENST00000467706 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
NOD1-207ENST00000467706 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
NOD1-207ENST00000467706 NCAPD3P42695 1498 aa21.28■■□□□ 1
NOD1-207ENST00000467706 HMGXB3Q12766 1538 aa21.27■■□□□ 1
NOD1-207ENST00000467706 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
NOD1-207ENST00000467706 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
NOD1-207ENST00000467706 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
NOD1-207ENST00000467706 CFTRP13569 1480 aa20.75■□□□□ 0.91
NOD1-207ENST00000467706 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
NOD1-207ENST00000467706 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
NOD1-207ENST00000467706 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
NOD1-207ENST00000467706 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
NOD1-207ENST00000467706 NESP48681 1621 aa20.59■□□□□ 0.89
NOD1-207ENST00000467706 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
NOD1-207ENST00000467706 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.87
NOD1-207ENST00000467706 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
NOD1-207ENST00000467706 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
NOD1-207ENST00000467706 SYNJ1O43426 1573 aa20.44■□□□□ 0.86
NOD1-207ENST00000467706 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
NOD1-207ENST00000467706 TOP2BQ02880 1626 aa20.39■□□□□ 0.86
NOD1-207ENST00000467706 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
NOD1-207ENST00000467706 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
NOD1-207ENST00000467706 CUX1P39880 1505 aa20.37■□□□□ 0.85
NOD1-207ENST00000467706 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
NOD1-207ENST00000467706 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
NOD1-207ENST00000467706 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
NOD1-207ENST00000467706 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
NOD1-207ENST00000467706 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
NOD1-207ENST00000467706 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
NOD1-207ENST00000467706 SOGA1O94964 1423 aa20.16■□□□□ 0.82
NOD1-207ENST00000467706 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
NOD1-207ENST00000467706 WDR62O43379 1518 aa20.12■□□□□ 0.81
NOD1-207ENST00000467706 POLA1P09884 1462 aaPredicted RBP20.12■□□□□ 0.81
NOD1-207ENST00000467706 EEA1Q15075 1411 aa20.12■□□□□ 0.81
NOD1-207ENST00000467706 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
NOD1-207ENST00000467706 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
NOD1-207ENST00000467706 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
NOD1-207ENST00000467706 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
NOD1-207ENST00000467706 CUX2O14529 1486 aa20.02■□□□□ 0.8
NOD1-207ENST00000467706 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.79
NOD1-207ENST00000467706 WDR97A6NE52 1622 aa20■□□□□ 0.79
NOD1-207ENST00000467706 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
NOD1-207ENST00000467706 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
NOD1-207ENST00000467706 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
NOD1-207ENST00000467706 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
NOD1-207ENST00000467706 ABCA5Q8WWZ7 1642 aa19.89■□□□□ 0.77
NOD1-207ENST00000467706 KIF21BO75037 1637 aa19.88■□□□□ 0.77
NOD1-207ENST00000467706 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
NOD1-207ENST00000467706 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
NOD1-207ENST00000467706 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
NOD1-207ENST00000467706 GOLGA3Q08378 1498 aa19.84■□□□□ 0.77
NOD1-207ENST00000467706 IGF1RP08069 1367 aa19.83■□□□□ 0.77
NOD1-207ENST00000467706 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
NOD1-207ENST00000467706 ERICH3Q5RHP9 1530 aa19.79■□□□□ 0.76
NOD1-207ENST00000467706 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
NOD1-207ENST00000467706 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
NOD1-207ENST00000467706 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
NOD1-207ENST00000467706 CUL7Q14999 1698 aa19.78■□□□□ 0.76
NOD1-207ENST00000467706 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
NOD1-207ENST00000467706 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
NOD1-207ENST00000467706 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
NOD1-207ENST00000467706 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
NOD1-207ENST00000467706 UBTFP17480 764 aaKnown RBP19.72■□□□□ 0.75
NOD1-207ENST00000467706 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
NOD1-207ENST00000467706 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
NOD1-207ENST00000467706 FHAD1B1AJZ9 1412 aa19.63■□□□□ 0.73
NOD1-207ENST00000467706 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
NOD1-207ENST00000467706 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
NOD1-207ENST00000467706 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
NOD1-207ENST00000467706 CTTNBP2Q8WZ74 1663 aa19.52■□□□□ 0.72
NOD1-207ENST00000467706 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
NOD1-207ENST00000467706 CLIP1P30622 1438 aa19.5■□□□□ 0.71
NOD1-207ENST00000467706 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
NOD1-207ENST00000467706 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms