RNA–Protein interactions for RNA: ENST00000467673.5

MACF1-211, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-211ENST00000467673 NISCHQ9Y2I1 1504 aa52.86■■■■■ 6.05
MACF1-211ENST00000467673 CCDC180Q9P1Z9 1646 aa47.04■■■■■ 5.12
MACF1-211ENST00000467673 ABCC9O60706 1549 aa46.28■■■■■ 5
MACF1-211ENST00000467673 RB1CC1Q8TDY2 1594 aa44.39■■■■■ 4.7
MACF1-211ENST00000467673 NACADO15069 1562 aa44.31■■■■■ 4.68
MACF1-211ENST00000467673 DCAF8L2P0C7V8 631 aa44.19■■■■■ 4.66
MACF1-211ENST00000467673 MYO15BQ96JP2 1530 aa44.02■■■■■ 4.64
MACF1-211ENST00000467673 ZCCHC6Q5VYS8 1495 aaKnown RBP43.97■■■■■ 4.63
MACF1-211ENST00000467673 DCAF1Q9Y4B6 1507 aa43.74■■■■■ 4.59
MACF1-211ENST00000467673 UNC13AQ9UPW8 1703 aa43.42■■■■■ 4.54
MACF1-211ENST00000467673 PABPN1Q86U42 306 aaKnown RBP eCLIP43.25■■■■■ 4.51
MACF1-211ENST00000467673 BICRAQ9NZM4 1560 aa43.16■■■■■ 4.5
MACF1-211ENST00000467673 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
MACF1-211ENST00000467673 DNAJC5BQ9UF47 199 aa42.86■■■■■ 4.45
MACF1-211ENST00000467673 SHROOM4Q9ULL8 1493 aa42.6■■■■■ 4.41
MACF1-211ENST00000467673 EIF4G1Q04637 1599 aaKnown RBP41.97■■■■■ 4.31
MACF1-211ENST00000467673 CC2D2AQ9P2K1 1620 aa41.86■■■■■ 4.29
MACF1-211ENST00000467673 CECR2Q9BXF3 1484 aa41.62■■■■■ 4.25
MACF1-211ENST00000467673 SMARCA4P51532 1647 aa41.04■■■■■ 4.16
MACF1-211ENST00000467673 NCAPD3P42695 1498 aa40.96■■■■■ 4.15
MACF1-211ENST00000467673 BAZ1AQ9NRL2 1556 aaPredicted RBP40.94■■■■■ 4.14
MACF1-211ENST00000467673 ATAD2BQ9ULI0 1458 aa40.92■■■■■ 4.14
MACF1-211ENST00000467673 SMARCA2P51531 1590 aa40.79■■■■■ 4.12
MACF1-211ENST00000467673 MROH2BQ7Z745 1585 aa40.75■■■■■ 4.11
MACF1-211ENST00000467673 PEG3Q9GZU2 1588 aa40.69■■■■■ 4.1
MACF1-211ENST00000467673 HMGXB3Q12766 1538 aa40.67■■■■■ 4.1
MACF1-211ENST00000467673 BAZ1BQ9UIG0 1483 aaKnown RBP40.5■■■■■ 4.07
MACF1-211ENST00000467673 WIZO95785 1651 aa40.26■■■■■ 4.04
MACF1-211ENST00000467673 RSF1Q96T23 1441 aaPredicted RBP40.22■■■■■ 4.03
MACF1-211ENST00000467673 NESP48681 1621 aa40.02■■■■■ 4
MACF1-211ENST00000467673 ERCC6Q03468 1493 aa39.84■■■■□ 3.97
MACF1-211ENST00000467673 LAMC3Q9Y6N6 1575 aa39.84■■■■□ 3.97
MACF1-211ENST00000467673 TOP2AP11388 1531 aaKnown RBP39.8■■■■□ 3.96
MACF1-211ENST00000467673 CADPSQ9ULU8 1353 aa39.72■■■■□ 3.95
MACF1-211ENST00000467673 PDS5BQ9NTI5 1447 aa39.58■■■■□ 3.93
MACF1-211ENST00000467673 CUX2O14529 1486 aa39.57■■■■□ 3.93
MACF1-211ENST00000467673 KIF21AQ7Z4S6 1674 aa39.48■■■■□ 3.91
MACF1-211ENST00000467673 CFTRP13569 1480 aa39.44■■■■□ 3.9
MACF1-211ENST00000467673 THOC2Q8NI27 1593 aaKnown RBP39.43■■■■□ 3.9
MACF1-211ENST00000467673 CCDC88BA6NC98 1476 aa39.39■■■■□ 3.9
MACF1-211ENST00000467673 FANCD2Q9BXW9 1451 aa39.24■■■■□ 3.87
MACF1-211ENST00000467673 MRC2Q9UBG0 1479 aa39.18■■■■□ 3.86
MACF1-211ENST00000467673 CEP164Q9UPV0 1460 aa39.17■■■■□ 3.86
MACF1-211ENST00000467673 WDR62O43379 1518 aa39.09■■■■□ 3.85
MACF1-211ENST00000467673 PRDM2Q13029 1718 aa39.03■■■■□ 3.84
MACF1-211ENST00000467673 SUPT5HO00267 1087 aaKnown RBP38.93■■■■□ 3.82
MACF1-211ENST00000467673 URB2Q14146 1524 aaKnown RBP38.89■■■■□ 3.82
MACF1-211ENST00000467673 DNAJC5Q9H3Z4 198 aa38.73■■■■□ 3.79
MACF1-211ENST00000467673 TOPBP1Q92547 1522 aa38.59■■■■□ 3.77
MACF1-211ENST00000467673 ABCC8Q09428 1581 aa38.54■■■■□ 3.76
MACF1-211ENST00000467673 DNMBPQ6XZF7 1577 aa38.49■■■■□ 3.75
MACF1-211ENST00000467673 IFT140Q96RY7 1462 aa38.39■■■■□ 3.74
MACF1-211ENST00000467673 ZNF608Q9ULD9 1512 aaPredicted RBP38.28■■■■□ 3.72
MACF1-211ENST00000467673 POLA1P09884 1462 aaPredicted RBP38.25■■■■□ 3.71
MACF1-211ENST00000467673 CUX1P39880 1505 aa38.22■■■■□ 3.71
MACF1-211ENST00000467673 TARBP1Q13395 1621 aaKnown RBP38.21■■■■□ 3.71
MACF1-211ENST00000467673 FGD5Q6ZNL6 1462 aa38.1■■■■□ 3.69
MACF1-211ENST00000467673 RAD54L2Q9Y4B4 1467 aa38.1■■■■□ 3.69
MACF1-211ENST00000467673 SOGA1O94964 1423 aa38.09■■■■□ 3.69
MACF1-211ENST00000467673 EIF4G3O43432 1585 aaKnown RBP38.05■■■■□ 3.68
MACF1-211ENST00000467673 AQRO60306 1485 aaKnown RBP eCLIP38.03■■■■□ 3.68
MACF1-211ENST00000467673 TDRD9Q8NDG6 1382 aaKnown RBP37.93■■■■□ 3.66
MACF1-211ENST00000467673 OSCARQ8IYS5 282 aa37.92■■■■□ 3.66
MACF1-211ENST00000467673 WRNQ14191 1432 aaPredicted RBP eCLIP37.86■■■■□ 3.65
MACF1-211ENST00000467673 WDR97A6NE52 1622 aa37.83■■■■□ 3.65
MACF1-211ENST00000467673 TOP2BQ02880 1626 aa37.81■■■■□ 3.64
MACF1-211ENST00000467673 SYNJ1O43426 1573 aa37.8■■■■□ 3.64
MACF1-211ENST00000467673 BIVM-ERCC5R4GMW8 1640 aa37.79■■■■□ 3.64
MACF1-211ENST00000467673 ABCA10Q8WWZ4 1543 aa37.75■■■■□ 3.63
MACF1-211ENST00000467673 GRIN2BQ13224 1484 aa37.65■■■■□ 3.62
MACF1-211ENST00000467673 GAPVD1Q14C86 1478 aa37.63■■■■□ 3.61
MACF1-211ENST00000467673 SNAPC4Q5SXM2 1469 aa37.62■■■■□ 3.61
MACF1-211ENST00000467673 CHD1O14646 1710 aa37.61■■■■□ 3.61
MACF1-211ENST00000467673 ABCA5Q8WWZ7 1642 aa37.59■■■■□ 3.61
MACF1-211ENST00000467673 MAGI1Q96QZ7 1491 aaPredicted RBP37.57■■■■□ 3.6
MACF1-211ENST00000467673 FBLN2P98095 1184 aa37.54■■■■□ 3.6
MACF1-211ENST00000467673 PBRM1Q86U86 1689 aa37.51■■■■□ 3.6
MACF1-211ENST00000467673 CHMP7Q8WUX9 453 aaPredicted RBP37.44■■■■□ 3.58
MACF1-211ENST00000467673 SYNJ2O15056 1496 aa37.44■■■■□ 3.58
MACF1-211ENST00000467673 RIMBP3CA6NJZ7 1639 aa37.31■■■■□ 3.56
MACF1-211ENST00000467673 RIMBP3BA6NNM3 1639 aa37.31■■■■□ 3.56
MACF1-211ENST00000467673 RIMBP3Q9UFD9 1639 aa37.31■■■■□ 3.56
MACF1-211ENST00000467673 ARHGEF11O15085 1522 aa37.29■■■■□ 3.56
MACF1-211ENST00000467673 ERICH3Q5RHP9 1530 aa37.27■■■■□ 3.56
MACF1-211ENST00000467673 CLASP1Q7Z460 1538 aa37.26■■■■□ 3.56
MACF1-211ENST00000467673 TRIM41Q8WV44 630 aa37.24■■■■□ 3.55
MACF1-211ENST00000467673 ADAMTS12P58397 1594 aa37.23■■■■□ 3.55
MACF1-211ENST00000467673 FHAD1B1AJZ9 1412 aa37.19■■■■□ 3.54
MACF1-211ENST00000467673 GRIN2AQ12879 1464 aa37.17■■■■□ 3.54
MACF1-211ENST00000467673 KIF27Q86VH2 1401 aa37.07■■■■□ 3.52
MACF1-211ENST00000467673 NUP160Q12769 1436 aa37.06■■■■□ 3.52
MACF1-211ENST00000467673 IGF1RP08069 1367 aa37.05■■■■□ 3.52
MACF1-211ENST00000467673 CEP170Q5SW79 1584 aa37.01■■■■□ 3.52
MACF1-211ENST00000467673 ARAP1Q96P48 1450 aa37■■■■□ 3.51
MACF1-211ENST00000467673 CYB5RLQ6IPT4 315 aa36.97■■■■□ 3.51
MACF1-211ENST00000467673 CUL7Q14999 1698 aa36.83■■■■□ 3.49
MACF1-211ENST00000467673 SHROOM2Q13796 1616 aa36.79■■■■□ 3.48
MACF1-211ENST00000467673 CARMIL1Q5VZK9 1371 aa36.77■■■■□ 3.48
MACF1-211ENST00000467673 RUSC2Q8N2Y8 1516 aa36.75■■■■□ 3.47
MACF1-211ENST00000467673 ERCC6L2Q5T890 1561 aa36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms