RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
CTNS-205ENST00000467663 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
CTNS-205ENST00000467663 ABCC9O60706 1549 aa25.98■■□□□ 1.75
CTNS-205ENST00000467663 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
CTNS-205ENST00000467663 NACADO15069 1562 aa24.78■■□□□ 1.56
CTNS-205ENST00000467663 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
CTNS-205ENST00000467663 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
CTNS-205ENST00000467663 ZCCHC6Q5VYS8 1495 aaKnown RBP24.43■■□□□ 1.5
CTNS-205ENST00000467663 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
CTNS-205ENST00000467663 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
CTNS-205ENST00000467663 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
CTNS-205ENST00000467663 DNAJC5BQ9UF47 199 aa24.18■■□□□ 1.46
CTNS-205ENST00000467663 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
CTNS-205ENST00000467663 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
CTNS-205ENST00000467663 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
CTNS-205ENST00000467663 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
CTNS-205ENST00000467663 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
CTNS-205ENST00000467663 CECR2Q9BXF3 1484 aa23.4■■□□□ 1.34
CTNS-205ENST00000467663 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
CTNS-205ENST00000467663 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
CTNS-205ENST00000467663 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
CTNS-205ENST00000467663 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
CTNS-205ENST00000467663 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
CTNS-205ENST00000467663 HMGXB3Q12766 1538 aa22.72■■□□□ 1.23
CTNS-205ENST00000467663 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
CTNS-205ENST00000467663 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
CTNS-205ENST00000467663 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
CTNS-205ENST00000467663 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
CTNS-205ENST00000467663 NESP48681 1621 aa22.4■■□□□ 1.18
CTNS-205ENST00000467663 WIZO95785 1651 aa22.36■■□□□ 1.17
CTNS-205ENST00000467663 CUX2O14529 1486 aa22.32■■□□□ 1.16
CTNS-205ENST00000467663 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
CTNS-205ENST00000467663 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
CTNS-205ENST00000467663 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
CTNS-205ENST00000467663 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
CTNS-205ENST00000467663 TOP2AP11388 1531 aaKnown RBP22.13■■□□□ 1.13
CTNS-205ENST00000467663 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
CTNS-205ENST00000467663 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
CTNS-205ENST00000467663 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
CTNS-205ENST00000467663 CFTRP13569 1480 aa22.02■■□□□ 1.12
CTNS-205ENST00000467663 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
CTNS-205ENST00000467663 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
CTNS-205ENST00000467663 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
CTNS-205ENST00000467663 WDR62O43379 1518 aa21.9■■□□□ 1.1
CTNS-205ENST00000467663 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
CTNS-205ENST00000467663 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
CTNS-205ENST00000467663 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
CTNS-205ENST00000467663 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
CTNS-205ENST00000467663 ABCC8Q09428 1581 aa21.54■■□□□ 1.04
CTNS-205ENST00000467663 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
CTNS-205ENST00000467663 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
CTNS-205ENST00000467663 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
CTNS-205ENST00000467663 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
CTNS-205ENST00000467663 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
CTNS-205ENST00000467663 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
CTNS-205ENST00000467663 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1
CTNS-205ENST00000467663 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
CTNS-205ENST00000467663 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
CTNS-205ENST00000467663 CUX1P39880 1505 aa21.26■□□□□ 0.99
CTNS-205ENST00000467663 SOGA1O94964 1423 aa21.26■□□□□ 0.99
CTNS-205ENST00000467663 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
CTNS-205ENST00000467663 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
CTNS-205ENST00000467663 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
CTNS-205ENST00000467663 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
CTNS-205ENST00000467663 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
CTNS-205ENST00000467663 FBLN2P98095 1184 aa21.05■□□□□ 0.96
CTNS-205ENST00000467663 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
CTNS-205ENST00000467663 CHD1O14646 1710 aa21.04■□□□□ 0.96
CTNS-205ENST00000467663 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
CTNS-205ENST00000467663 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
CTNS-205ENST00000467663 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
CTNS-205ENST00000467663 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
CTNS-205ENST00000467663 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
CTNS-205ENST00000467663 TOP2BQ02880 1626 aa21■□□□□ 0.95
CTNS-205ENST00000467663 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
CTNS-205ENST00000467663 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
CTNS-205ENST00000467663 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
CTNS-205ENST00000467663 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
CTNS-205ENST00000467663 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
CTNS-205ENST00000467663 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
CTNS-205ENST00000467663 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
CTNS-205ENST00000467663 ABCA5Q8WWZ7 1642 aa20.95■□□□□ 0.94
CTNS-205ENST00000467663 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
CTNS-205ENST00000467663 PBRM1Q86U86 1689 aa20.91■□□□□ 0.94
CTNS-205ENST00000467663 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
CTNS-205ENST00000467663 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
CTNS-205ENST00000467663 ARAP1Q96P48 1450 aa20.79■□□□□ 0.92
CTNS-205ENST00000467663 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
CTNS-205ENST00000467663 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
CTNS-205ENST00000467663 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
CTNS-205ENST00000467663 FHAD1B1AJZ9 1412 aa20.76■□□□□ 0.91
CTNS-205ENST00000467663 NUP160Q12769 1436 aa20.7■□□□□ 0.9
CTNS-205ENST00000467663 CEP170Q5SW79 1584 aa20.67■□□□□ 0.9
CTNS-205ENST00000467663 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
CTNS-205ENST00000467663 IGF1RP08069 1367 aa20.59■□□□□ 0.89
CTNS-205ENST00000467663 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
CTNS-205ENST00000467663 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
CTNS-205ENST00000467663 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
CTNS-205ENST00000467663 CUL7Q14999 1698 aa20.49■□□□□ 0.87
CTNS-205ENST00000467663 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms