RNA–Protein interactions for RNA: ENST00000467624.1

ABCA2-214, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 3

Gene ABCA2, Length 302 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-214ENST00000467624 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
ABCA2-214ENST00000467624 CCDC180Q9P1Z9 1646 aa26.64■■□□□ 1.85
ABCA2-214ENST00000467624 ABCC9O60706 1549 aa26.17■■□□□ 1.78
ABCA2-214ENST00000467624 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
ABCA2-214ENST00000467624 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
ABCA2-214ENST00000467624 NACADO15069 1562 aa25.09■■□□□ 1.61
ABCA2-214ENST00000467624 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
ABCA2-214ENST00000467624 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
ABCA2-214ENST00000467624 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
ABCA2-214ENST00000467624 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
ABCA2-214ENST00000467624 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
ABCA2-214ENST00000467624 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
ABCA2-214ENST00000467624 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
ABCA2-214ENST00000467624 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
ABCA2-214ENST00000467624 DNAJC5BQ9UF47 199 aa24.03■■□□□ 1.44
ABCA2-214ENST00000467624 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
ABCA2-214ENST00000467624 CC2D2AQ9P2K1 1620 aa23.63■■□□□ 1.37
ABCA2-214ENST00000467624 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
ABCA2-214ENST00000467624 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
ABCA2-214ENST00000467624 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
ABCA2-214ENST00000467624 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
ABCA2-214ENST00000467624 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
ABCA2-214ENST00000467624 SMARCA2P51531 1590 aa23.14■■□□□ 1.3
ABCA2-214ENST00000467624 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
ABCA2-214ENST00000467624 BAZ1BQ9UIG0 1483 aaKnown RBP22.99■■□□□ 1.27
ABCA2-214ENST00000467624 HMGXB3Q12766 1538 aa22.99■■□□□ 1.27
ABCA2-214ENST00000467624 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
ABCA2-214ENST00000467624 WIZO95785 1651 aa22.88■■□□□ 1.25
ABCA2-214ENST00000467624 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
ABCA2-214ENST00000467624 NESP48681 1621 aa22.6■■□□□ 1.21
ABCA2-214ENST00000467624 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
ABCA2-214ENST00000467624 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
ABCA2-214ENST00000467624 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
ABCA2-214ENST00000467624 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
ABCA2-214ENST00000467624 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
ABCA2-214ENST00000467624 SUPT5HO00267 1087 aaKnown RBP22.44■■□□□ 1.18
ABCA2-214ENST00000467624 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
ABCA2-214ENST00000467624 CFTRP13569 1480 aa22.33■■□□□ 1.16
ABCA2-214ENST00000467624 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
ABCA2-214ENST00000467624 CUX2O14529 1486 aa22.28■■□□□ 1.16
ABCA2-214ENST00000467624 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
ABCA2-214ENST00000467624 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
ABCA2-214ENST00000467624 THOC2Q8NI27 1593 aaKnown RBP22.19■■□□□ 1.14
ABCA2-214ENST00000467624 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
ABCA2-214ENST00000467624 PRDM2Q13029 1718 aa22.14■■□□□ 1.14
ABCA2-214ENST00000467624 WDR62O43379 1518 aa22.05■■□□□ 1.12
ABCA2-214ENST00000467624 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
ABCA2-214ENST00000467624 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
ABCA2-214ENST00000467624 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
ABCA2-214ENST00000467624 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
ABCA2-214ENST00000467624 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
ABCA2-214ENST00000467624 DNAJC5Q9H3Z4 198 aa21.71■■□□□ 1.07
ABCA2-214ENST00000467624 CUX1P39880 1505 aa21.67■■□□□ 1.06
ABCA2-214ENST00000467624 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
ABCA2-214ENST00000467624 SOGA1O94964 1423 aa21.66■■□□□ 1.06
ABCA2-214ENST00000467624 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
ABCA2-214ENST00000467624 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
ABCA2-214ENST00000467624 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
ABCA2-214ENST00000467624 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
ABCA2-214ENST00000467624 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
ABCA2-214ENST00000467624 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.046e-9■■■■■ 45.1
ABCA2-214ENST00000467624 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
ABCA2-214ENST00000467624 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
ABCA2-214ENST00000467624 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
ABCA2-214ENST00000467624 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
ABCA2-214ENST00000467624 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
ABCA2-214ENST00000467624 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
ABCA2-214ENST00000467624 FBLN2P98095 1184 aa21.43■■□□□ 1.02
ABCA2-214ENST00000467624 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
ABCA2-214ENST00000467624 ABCA10Q8WWZ4 1543 aa21.39■■□□□ 1.02
ABCA2-214ENST00000467624 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
ABCA2-214ENST00000467624 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
ABCA2-214ENST00000467624 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
ABCA2-214ENST00000467624 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
ABCA2-214ENST00000467624 MAGI1Q96QZ7 1491 aaPredicted RBP21.29■■□□□ 1
ABCA2-214ENST00000467624 PBRM1Q86U86 1689 aa21.28■■□□□ 1
ABCA2-214ENST00000467624 CHD1O14646 1710 aa21.28■■□□□ 1
ABCA2-214ENST00000467624 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
ABCA2-214ENST00000467624 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
ABCA2-214ENST00000467624 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
ABCA2-214ENST00000467624 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
ABCA2-214ENST00000467624 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
ABCA2-214ENST00000467624 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
ABCA2-214ENST00000467624 ADAMTS12P58397 1594 aa21.07■□□□□ 0.96
ABCA2-214ENST00000467624 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
ABCA2-214ENST00000467624 IGF1RP08069 1367 aa21.06■□□□□ 0.96
ABCA2-214ENST00000467624 RIMBP3CA6NJZ7 1639 aa21.02■□□□□ 0.96
ABCA2-214ENST00000467624 RIMBP3BA6NNM3 1639 aa21.02■□□□□ 0.96
ABCA2-214ENST00000467624 RIMBP3Q9UFD9 1639 aa21.02■□□□□ 0.96
ABCA2-214ENST00000467624 ARHGEF11O15085 1522 aa21■□□□□ 0.95
ABCA2-214ENST00000467624 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
ABCA2-214ENST00000467624 CYB5RLQ6IPT4 315 aa20.97■□□□□ 0.95
ABCA2-214ENST00000467624 CUL7Q14999 1698 aa20.96■□□□□ 0.95
ABCA2-214ENST00000467624 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
ABCA2-214ENST00000467624 NUP160Q12769 1436 aa20.95■□□□□ 0.94
ABCA2-214ENST00000467624 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
ABCA2-214ENST00000467624 RUSC2Q8N2Y8 1516 aa20.92■□□□□ 0.94
ABCA2-214ENST00000467624 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
ABCA2-214ENST00000467624 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
ABCA2-214ENST00000467624 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms