RNA–Protein interactions for RNA: ENST00000467480.1

PIM3-202, Transcript of Pim-3 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene PIM3, Length 723 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIM3-202ENST00000467480 NISCHQ9Y2I1 1504 aa77.44■■■■■ 9.99
PIM3-202ENST00000467480 CCDC180Q9P1Z9 1646 aa69.1■■■■■ 8.65
PIM3-202ENST00000467480 ABCC9O60706 1549 aa68.48■■■■■ 8.55
PIM3-202ENST00000467480 RB1CC1Q8TDY2 1594 aa65.5■■■■■ 8.08
PIM3-202ENST00000467480 NACADO15069 1562 aa65.22■■■■■ 8.03
PIM3-202ENST00000467480 DCAF8L2P0C7V8 631 aa65.21■■■■■ 8.03
PIM3-202ENST00000467480 MYO15BQ96JP2 1530 aa64.56■■■■■ 7.93
PIM3-202ENST00000467480 ZCCHC6Q5VYS8 1495 aaKnown RBP64.34■■■■■ 7.89
PIM3-202ENST00000467480 DCAF1Q9Y4B6 1507 aa64■■■■■ 7.84
PIM3-202ENST00000467480 PABPN1Q86U42 306 aaKnown RBP eCLIP63.92■■■■■ 7.82
PIM3-202ENST00000467480 UNC13AQ9UPW8 1703 aa63.81■■■■■ 7.81
PIM3-202ENST00000467480 DNAJC5BQ9UF47 199 aa63.5■■■■■ 7.76
PIM3-202ENST00000467480 BICRAQ9NZM4 1560 aa63.46■■■■■ 7.75
PIM3-202ENST00000467480 SCRIBQ14160 1630 aa63.08■■■■■ 7.69
PIM3-202ENST00000467480 SHROOM4Q9ULL8 1493 aa62.81■■■■■ 7.65
PIM3-202ENST00000467480 EIF4G1Q04637 1599 aaKnown RBP61.91■■■■■ 7.5
PIM3-202ENST00000467480 CC2D2AQ9P2K1 1620 aa61.84■■■■■ 7.49
PIM3-202ENST00000467480 CECR2Q9BXF3 1484 aa61.62■■■■■ 7.46
PIM3-202ENST00000467480 SMARCA4P51532 1647 aa60.22■■■■■ 7.23
PIM3-202ENST00000467480 NCAPD3P42695 1498 aa60.21■■■■■ 7.23
PIM3-202ENST00000467480 ATAD2BQ9ULI0 1458 aa60.14■■■■■ 7.22
PIM3-202ENST00000467480 BAZ1AQ9NRL2 1556 aaPredicted RBP60.09■■■■■ 7.21
PIM3-202ENST00000467480 SMARCA2P51531 1590 aa60.03■■■■■ 7.2
PIM3-202ENST00000467480 HMGXB3Q12766 1538 aa59.82■■■■■ 7.17
PIM3-202ENST00000467480 MROH2BQ7Z745 1585 aa59.67■■■■■ 7.14
PIM3-202ENST00000467480 BAZ1BQ9UIG0 1483 aaKnown RBP59.64■■■■■ 7.14
PIM3-202ENST00000467480 PEG3Q9GZU2 1588 aa59.61■■■■■ 7.13
PIM3-202ENST00000467480 ERCC6Q03468 1493 aa59.16■■■■■ 7.06
PIM3-202ENST00000467480 NESP48681 1621 aa59■■■■■ 7.04
PIM3-202ENST00000467480 WIZO95785 1651 aa58.95■■■■■ 7.03
PIM3-202ENST00000467480 RSF1Q96T23 1441 aaPredicted RBP58.75■■■■■ 7
PIM3-202ENST00000467480 CUX2O14529 1486 aa58.73■■■■■ 6.99
PIM3-202ENST00000467480 LAMC3Q9Y6N6 1575 aa58.72■■■■■ 6.99
PIM3-202ENST00000467480 CADPSQ9ULU8 1353 aa58.46■■■■■ 6.95
PIM3-202ENST00000467480 PDS5BQ9NTI5 1447 aa58.45■■■■■ 6.95
PIM3-202ENST00000467480 TOP2AP11388 1531 aaKnown RBP58.32■■■■■ 6.93
PIM3-202ENST00000467480 THOC2Q8NI27 1593 aaKnown RBP58.2■■■■■ 6.91
PIM3-202ENST00000467480 KIF21AQ7Z4S6 1674 aa58.19■■■■■ 6.91
PIM3-202ENST00000467480 CFTRP13569 1480 aa57.92■■■■■ 6.86
PIM3-202ENST00000467480 MRC2Q9UBG0 1479 aa57.86■■■■■ 6.85
PIM3-202ENST00000467480 DNAJC5Q9H3Z4 198 aa57.84■■■■■ 6.85
PIM3-202ENST00000467480 CEP164Q9UPV0 1460 aa57.8■■■■■ 6.84
PIM3-202ENST00000467480 FANCD2Q9BXW9 1451 aa57.79■■■■■ 6.84
PIM3-202ENST00000467480 CCDC88BA6NC98 1476 aa57.66■■■■■ 6.82
PIM3-202ENST00000467480 WDR62O43379 1518 aa57.64■■■■■ 6.82
PIM3-202ENST00000467480 PRDM2Q13029 1718 aa57.25■■■■■ 6.75
PIM3-202ENST00000467480 URB2Q14146 1524 aaKnown RBP57.21■■■■■ 6.75
PIM3-202ENST00000467480 SUPT5HO00267 1087 aaKnown RBP56.82■■■■■ 6.69
PIM3-202ENST00000467480 TOPBP1Q92547 1522 aa56.74■■■■■ 6.67
PIM3-202ENST00000467480 ABCC8Q09428 1581 aa56.72■■■■■ 6.67
PIM3-202ENST00000467480 IFT140Q96RY7 1462 aa56.62■■■■■ 6.65
PIM3-202ENST00000467480 DNMBPQ6XZF7 1577 aa56.6■■■■■ 6.65
PIM3-202ENST00000467480 ZNF608Q9ULD9 1512 aaPredicted RBP56.39■■■■■ 6.62
PIM3-202ENST00000467480 OSCARQ8IYS5 282 aa56.24■■■■■ 6.59
PIM3-202ENST00000467480 POLA1P09884 1462 aaPredicted RBP56.22■■■■■ 6.59
PIM3-202ENST00000467480 TARBP1Q13395 1621 aaKnown RBP56.12■■■■■ 6.57
PIM3-202ENST00000467480 EIF4G3O43432 1585 aaKnown RBP56.1■■■■■ 6.57
PIM3-202ENST00000467480 SOGA1O94964 1423 aa56.03■■■■■ 6.56
PIM3-202ENST00000467480 CUX1P39880 1505 aa56.02■■■■■ 6.56
PIM3-202ENST00000467480 AQRO60306 1485 aaKnown RBP eCLIP56.01■■■■■ 6.562e-8■■■□□ 15.4
PIM3-202ENST00000467480 RAD54L2Q9Y4B4 1467 aa56■■■■■ 6.56
PIM3-202ENST00000467480 FGD5Q6ZNL6 1462 aa55.99■■■■■ 6.55
PIM3-202ENST00000467480 TDRD9Q8NDG6 1382 aaKnown RBP55.82■■■■■ 6.53
PIM3-202ENST00000467480 TRIM41Q8WV44 630 aa55.7■■■■■ 6.51
PIM3-202ENST00000467480 WDR97A6NE52 1622 aa55.66■■■■■ 6.5
PIM3-202ENST00000467480 FBLN2P98095 1184 aa55.61■■■■■ 6.49
PIM3-202ENST00000467480 CHD1O14646 1710 aa55.48■■■■■ 6.47
PIM3-202ENST00000467480 SNAPC4Q5SXM2 1469 aa55.48■■■■■ 6.47
PIM3-202ENST00000467480 WRNQ14191 1432 aaPredicted RBP eCLIP55.46■■■■■ 6.47
PIM3-202ENST00000467480 GRIN2BQ13224 1484 aa55.45■■■■■ 6.47
PIM3-202ENST00000467480 ABCA10Q8WWZ4 1543 aa55.39■■■■■ 6.46
PIM3-202ENST00000467480 MAGI1Q96QZ7 1491 aaPredicted RBP55.37■■■■■ 6.45
PIM3-202ENST00000467480 GAPVD1Q14C86 1478 aa55.35■■■■■ 6.45
PIM3-202ENST00000467480 TOP2BQ02880 1626 aa55.32■■■■■ 6.45
PIM3-202ENST00000467480 CHMP7Q8WUX9 453 aaPredicted RBP55.31■■■■■ 6.44
PIM3-202ENST00000467480 RIMBP3CA6NJZ7 1639 aa55.28■■■■■ 6.44
PIM3-202ENST00000467480 RIMBP3BA6NNM3 1639 aa55.28■■■■■ 6.44
PIM3-202ENST00000467480 RIMBP3Q9UFD9 1639 aa55.28■■■■■ 6.44
PIM3-202ENST00000467480 BIVM-ERCC5R4GMW8 1640 aa55.28■■■■■ 6.44
PIM3-202ENST00000467480 SYNJ1O43426 1573 aa55.27■■■■■ 6.44
PIM3-202ENST00000467480 ARHGEF11O15085 1522 aa55.24■■■■■ 6.43
PIM3-202ENST00000467480 SYNJ2O15056 1496 aa55.18■■■■■ 6.42
PIM3-202ENST00000467480 ABCA5Q8WWZ7 1642 aa55.17■■■■■ 6.42
PIM3-202ENST00000467480 PBRM1Q86U86 1689 aa55.16■■■■■ 6.42
PIM3-202ENST00000467480 CLASP1Q7Z460 1538 aa54.91■■■■■ 6.38
PIM3-202ENST00000467480 CYB5RLQ6IPT4 315 aa54.87■■■■■ 6.37
PIM3-202ENST00000467480 ARAP1Q96P48 1450 aa54.74■■■■■ 6.35
PIM3-202ENST00000467480 ADAMTS12P58397 1594 aa54.74■■■■■ 6.35
PIM3-202ENST00000467480 GRIN2AQ12879 1464 aa54.72■■■■■ 6.35
PIM3-202ENST00000467480 ERICH3Q5RHP9 1530 aa54.71■■■■■ 6.35
PIM3-202ENST00000467480 FHAD1B1AJZ9 1412 aa54.7■■■■■ 6.35
PIM3-202ENST00000467480 NUP160Q12769 1436 aa54.49■■■■■ 6.31
PIM3-202ENST00000467480 CEP170Q5SW79 1584 aa54.43■■■■■ 6.3
PIM3-202ENST00000467480 KIF27Q86VH2 1401 aa54.37■■■■■ 6.29
PIM3-202ENST00000467480 IGF1RP08069 1367 aa54.21■■■■■ 6.27
PIM3-202ENST00000467480 ERCC6L2Q5T890 1561 aa54.1■■■■■ 6.25
PIM3-202ENST00000467480 SHROOM2Q13796 1616 aa54.08■■■■■ 6.25
PIM3-202ENST00000467480 TRHP20396 242 aaPredicted RBP54.08■■■■■ 6.25
PIM3-202ENST00000467480 CUL7Q14999 1698 aa54.04■■■■■ 6.24
PIM3-202ENST00000467480 JPH4Q96JJ6 628 aa54■■■■■ 6.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms