RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
HLA-DOA-203ENST00000467465 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
HLA-DOA-203ENST00000467465 ABCC9O60706 1549 aa20.89■□□□□ 0.94
HLA-DOA-203ENST00000467465 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
HLA-DOA-203ENST00000467465 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
HLA-DOA-203ENST00000467465 NACADO15069 1562 aa19.95■□□□□ 0.78
HLA-DOA-203ENST00000467465 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
HLA-DOA-203ENST00000467465 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
HLA-DOA-203ENST00000467465 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
HLA-DOA-203ENST00000467465 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
HLA-DOA-203ENST00000467465 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
HLA-DOA-203ENST00000467465 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
HLA-DOA-203ENST00000467465 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
HLA-DOA-203ENST00000467465 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
HLA-DOA-203ENST00000467465 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
HLA-DOA-203ENST00000467465 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
HLA-DOA-203ENST00000467465 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
HLA-DOA-203ENST00000467465 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
HLA-DOA-203ENST00000467465 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
HLA-DOA-203ENST00000467465 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
HLA-DOA-203ENST00000467465 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
HLA-DOA-203ENST00000467465 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
HLA-DOA-203ENST00000467465 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
HLA-DOA-203ENST00000467465 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
HLA-DOA-203ENST00000467465 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
HLA-DOA-203ENST00000467465 PEG3Q9GZU2 1588 aa18.28■□□□□ 0.52
HLA-DOA-203ENST00000467465 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
HLA-DOA-203ENST00000467465 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
HLA-DOA-203ENST00000467465 CUX2O14529 1486 aa18.13■□□□□ 0.49
HLA-DOA-203ENST00000467465 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
HLA-DOA-203ENST00000467465 WIZO95785 1651 aa18.06■□□□□ 0.48
HLA-DOA-203ENST00000467465 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
HLA-DOA-203ENST00000467465 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
HLA-DOA-203ENST00000467465 NESP48681 1621 aa17.91■□□□□ 0.46
HLA-DOA-203ENST00000467465 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
HLA-DOA-203ENST00000467465 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
HLA-DOA-203ENST00000467465 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
HLA-DOA-203ENST00000467465 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
HLA-DOA-203ENST00000467465 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
HLA-DOA-203ENST00000467465 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
HLA-DOA-203ENST00000467465 CFTRP13569 1480 aa17.69■□□□□ 0.42
HLA-DOA-203ENST00000467465 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
HLA-DOA-203ENST00000467465 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
HLA-DOA-203ENST00000467465 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
HLA-DOA-203ENST00000467465 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
HLA-DOA-203ENST00000467465 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
HLA-DOA-203ENST00000467465 WDR62O43379 1518 aa17.57■□□□□ 0.4
HLA-DOA-203ENST00000467465 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
HLA-DOA-203ENST00000467465 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
HLA-DOA-203ENST00000467465 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
HLA-DOA-203ENST00000467465 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
HLA-DOA-203ENST00000467465 TOPBP1Q92547 1522 aa17.32■□□□□ 0.36
HLA-DOA-203ENST00000467465 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
HLA-DOA-203ENST00000467465 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
HLA-DOA-203ENST00000467465 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
HLA-DOA-203ENST00000467465 TARBP1Q13395 1621 aaKnown RBP17.15■□□□□ 0.34
HLA-DOA-203ENST00000467465 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
HLA-DOA-203ENST00000467465 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
HLA-DOA-203ENST00000467465 CUX1P39880 1505 aa17.12■□□□□ 0.33
HLA-DOA-203ENST00000467465 FGD5Q6ZNL6 1462 aa17.09■□□□□ 0.33
HLA-DOA-203ENST00000467465 WDR97A6NE52 1622 aa17.09■□□□□ 0.33
HLA-DOA-203ENST00000467465 SOGA1O94964 1423 aa17.07■□□□□ 0.32
HLA-DOA-203ENST00000467465 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
HLA-DOA-203ENST00000467465 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
HLA-DOA-203ENST00000467465 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
HLA-DOA-203ENST00000467465 AQRO60306 1485 aaKnown RBP eCLIP17.01■□□□□ 0.31
HLA-DOA-203ENST00000467465 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
HLA-DOA-203ENST00000467465 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
HLA-DOA-203ENST00000467465 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
HLA-DOA-203ENST00000467465 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
HLA-DOA-203ENST00000467465 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
HLA-DOA-203ENST00000467465 WRNQ14191 1432 aaPredicted RBP eCLIP16.98■□□□□ 0.31
HLA-DOA-203ENST00000467465 CHD1O14646 1710 aa16.96■□□□□ 0.31
HLA-DOA-203ENST00000467465 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
HLA-DOA-203ENST00000467465 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
HLA-DOA-203ENST00000467465 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
HLA-DOA-203ENST00000467465 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
HLA-DOA-203ENST00000467465 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
HLA-DOA-203ENST00000467465 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
HLA-DOA-203ENST00000467465 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
HLA-DOA-203ENST00000467465 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
HLA-DOA-203ENST00000467465 FBLN2P98095 1184 aa16.9■□□□□ 0.3
HLA-DOA-203ENST00000467465 GAPVD1Q14C86 1478 aa16.89■□□□□ 0.29
HLA-DOA-203ENST00000467465 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
HLA-DOA-203ENST00000467465 SYNJ2O15056 1496 aa16.83■□□□□ 0.28
HLA-DOA-203ENST00000467465 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
HLA-DOA-203ENST00000467465 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
HLA-DOA-203ENST00000467465 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
HLA-DOA-203ENST00000467465 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
HLA-DOA-203ENST00000467465 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
HLA-DOA-203ENST00000467465 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
HLA-DOA-203ENST00000467465 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
HLA-DOA-203ENST00000467465 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
HLA-DOA-203ENST00000467465 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
HLA-DOA-203ENST00000467465 NUP160Q12769 1436 aa16.62■□□□□ 0.25
HLA-DOA-203ENST00000467465 CUL7Q14999 1698 aa16.62■□□□□ 0.25
HLA-DOA-203ENST00000467465 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
HLA-DOA-203ENST00000467465 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
HLA-DOA-203ENST00000467465 IGF1RP08069 1367 aa16.54■□□□□ 0.24
HLA-DOA-203ENST00000467465 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms