RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
HDLBP-231ENST00000467435 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
HDLBP-231ENST00000467435 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
HDLBP-231ENST00000467435 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
HDLBP-231ENST00000467435 ABCC9O60706 1549 aa23.04■■□□□ 1.28
HDLBP-231ENST00000467435 DCAF8L2P0C7V8 631 aa22.96■■□□□ 1.27
HDLBP-231ENST00000467435 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
HDLBP-231ENST00000467435 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
HDLBP-231ENST00000467435 NACADO15069 1562 aa22.75■■□□□ 1.23
HDLBP-231ENST00000467435 RB1CC1Q8TDY2 1594 aa22.58■■□□□ 1.2
HDLBP-231ENST00000467435 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
HDLBP-231ENST00000467435 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
HDLBP-231ENST00000467435 BICRAQ9NZM4 1560 aa21.88■■□□□ 1.09
HDLBP-231ENST00000467435 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
HDLBP-231ENST00000467435 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
HDLBP-231ENST00000467435 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
HDLBP-231ENST00000467435 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
HDLBP-231ENST00000467435 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
HDLBP-231ENST00000467435 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
HDLBP-231ENST00000467435 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
HDLBP-231ENST00000467435 WIZO95785 1651 aa21.51■■□□□ 1.03
HDLBP-231ENST00000467435 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
HDLBP-231ENST00000467435 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
HDLBP-231ENST00000467435 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
HDLBP-231ENST00000467435 SMARCA2P51531 1590 aa21.18■□□□□ 0.98
HDLBP-231ENST00000467435 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
HDLBP-231ENST00000467435 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
HDLBP-231ENST00000467435 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
HDLBP-231ENST00000467435 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
HDLBP-231ENST00000467435 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
HDLBP-231ENST00000467435 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
HDLBP-231ENST00000467435 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
HDLBP-231ENST00000467435 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
HDLBP-231ENST00000467435 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
HDLBP-231ENST00000467435 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
HDLBP-231ENST00000467435 CFTRP13569 1480 aa20.48■□□□□ 0.87
HDLBP-231ENST00000467435 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
HDLBP-231ENST00000467435 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
HDLBP-231ENST00000467435 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
HDLBP-231ENST00000467435 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
HDLBP-231ENST00000467435 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
HDLBP-231ENST00000467435 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
HDLBP-231ENST00000467435 CUX1P39880 1505 aa20.24■□□□□ 0.83
HDLBP-231ENST00000467435 NESP48681 1621 aa20.24■□□□□ 0.83
HDLBP-231ENST00000467435 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
HDLBP-231ENST00000467435 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
HDLBP-231ENST00000467435 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
HDLBP-231ENST00000467435 EEA1Q15075 1411 aa20.15■□□□□ 0.82
HDLBP-231ENST00000467435 SOGA1O94964 1423 aa20.14■□□□□ 0.81
HDLBP-231ENST00000467435 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
HDLBP-231ENST00000467435 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
HDLBP-231ENST00000467435 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
HDLBP-231ENST00000467435 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
HDLBP-231ENST00000467435 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
HDLBP-231ENST00000467435 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
HDLBP-231ENST00000467435 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
HDLBP-231ENST00000467435 TOPBP1Q92547 1522 aa20.01■□□□□ 0.79
HDLBP-231ENST00000467435 KIF21BO75037 1637 aa19.97■□□□□ 0.79
HDLBP-231ENST00000467435 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
HDLBP-231ENST00000467435 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
HDLBP-231ENST00000467435 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
HDLBP-231ENST00000467435 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
HDLBP-231ENST00000467435 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
HDLBP-231ENST00000467435 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
HDLBP-231ENST00000467435 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
HDLBP-231ENST00000467435 CUX2O14529 1486 aa19.86■□□□□ 0.77
HDLBP-231ENST00000467435 MRC2Q9UBG0 1479 aa19.86■□□□□ 0.77
HDLBP-231ENST00000467435 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
HDLBP-231ENST00000467435 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
HDLBP-231ENST00000467435 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
HDLBP-231ENST00000467435 WDR62O43379 1518 aa19.78■□□□□ 0.76
HDLBP-231ENST00000467435 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
HDLBP-231ENST00000467435 ERCC6Q03468 1493 aa19.77■□□□□ 0.76
HDLBP-231ENST00000467435 PRXQ9BXM0 1461 aa19.77■□□□□ 0.76
HDLBP-231ENST00000467435 THOC2Q8NI27 1593 aaKnown RBP19.77■□□□□ 0.76
HDLBP-231ENST00000467435 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
HDLBP-231ENST00000467435 TARBP1Q13395 1621 aaKnown RBP19.74■□□□□ 0.75
HDLBP-231ENST00000467435 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
HDLBP-231ENST00000467435 CEP162Q5TB80 1403 aa19.7■□□□□ 0.74
HDLBP-231ENST00000467435 CUL7Q14999 1698 aa19.69■□□□□ 0.74
HDLBP-231ENST00000467435 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
HDLBP-231ENST00000467435 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
HDLBP-231ENST00000467435 IGF1RP08069 1367 aa19.65■□□□□ 0.74
HDLBP-231ENST00000467435 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
HDLBP-231ENST00000467435 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
HDLBP-231ENST00000467435 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
HDLBP-231ENST00000467435 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
HDLBP-231ENST00000467435 CTTNBP2Q8WZ74 1663 aa19.53■□□□□ 0.72
HDLBP-231ENST00000467435 CLIP1P30622 1438 aa19.53■□□□□ 0.72
HDLBP-231ENST00000467435 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
HDLBP-231ENST00000467435 ADAMTS12P58397 1594 aa19.49■□□□□ 0.71
HDLBP-231ENST00000467435 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
HDLBP-231ENST00000467435 AQRO60306 1485 aaKnown RBP eCLIP19.46■□□□□ 0.712e-8■■□□□ 14.3
HDLBP-231ENST00000467435 GRIN2BQ13224 1484 aa19.45■□□□□ 0.7
HDLBP-231ENST00000467435 ARAP1Q96P48 1450 aa19.39■□□□□ 0.69
HDLBP-231ENST00000467435 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
HDLBP-231ENST00000467435 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
HDLBP-231ENST00000467435 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
HDLBP-231ENST00000467435 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
HDLBP-231ENST00000467435 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms